RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 COL1A2P08123 1366 aa20.34■□□□□ 0.85
CHMP2A-203ENST00000597209 EYSQ5T1H1 3165 aa20.33■□□□□ 0.85
CHMP2A-203ENST00000597209 BACH1O14867 736 aa20.33■□□□□ 0.85
CHMP2A-203ENST00000597209 GHRP10912 638 aa20.33■□□□□ 0.85
CHMP2A-203ENST00000597209 CCDC85BQ15834 202 aaPredicted RBP20.33■□□□□ 0.85
CHMP2A-203ENST00000597209 ZNF484Q5JVG2 852 aa20.33■□□□□ 0.85
CHMP2A-203ENST00000597209 FAM117BQ6P1L5 589 aa20.33■□□□□ 0.85
CHMP2A-203ENST00000597209 MTHFD1LQ6UB35 978 aa20.33■□□□□ 0.85
CHMP2A-203ENST00000597209 TSHZ1Q6ZSZ6 1077 aa20.33■□□□□ 0.85
CHMP2A-203ENST00000597209 ATXN2LQ8WWM7 1075 aaKnown RBP20.33■□□□□ 0.85
CHMP2A-203ENST00000597209 SYMPKQ92797 1274 aaKnown RBP20.33■□□□□ 0.85
CHMP2A-203ENST00000597209 LMCD1Q9NZU5 365 aa20.33■□□□□ 0.85
CHMP2A-203ENST00000597209 MAFBQ9Y5Q3 323 aaPredicted RBP20.33■□□□□ 0.85
CHMP2A-203ENST00000597209 UNC80Q8N2C7 3258 aa20.33■□□□□ 0.85
CHMP2A-203ENST00000597209 COL4A6Q14031 1691 aa20.32■□□□□ 0.84
CHMP2A-203ENST00000597209 KDM3AQ9Y4C1 1321 aa20.32■□□□□ 0.84
CHMP2A-203ENST00000597209 M0R2N6 131 aa20.32■□□□□ 0.84
CHMP2A-203ENST00000597209 LPXNO60711 386 aa20.32■□□□□ 0.84
CHMP2A-203ENST00000597209 CDKL5O76039 1030 aa20.32■□□□□ 0.84
CHMP2A-203ENST00000597209 PSAPP07602 524 aa20.32■□□□□ 0.84
CHMP2A-203ENST00000597209 STK3Q13188 491 aa20.32■□□□□ 0.84
CHMP2A-203ENST00000597209 GRB10Q13322 594 aa20.32■□□□□ 0.84
CHMP2A-203ENST00000597209 ANKRD1Q15327 319 aa20.32■□□□□ 0.84
CHMP2A-203ENST00000597209 SWSAP1Q6NVH7 229 aa20.32■□□□□ 0.84
CHMP2A-203ENST00000597209 PDXDC2PQ6P474 469 aa20.32■□□□□ 0.84
CHMP2A-203ENST00000597209 FAM43BQ6ZT52 329 aaPredicted RBP20.32■□□□□ 0.84
CHMP2A-203ENST00000597209 SPRED2Q7Z698 418 aa20.32■□□□□ 0.84
CHMP2A-203ENST00000597209 BLIDQ8IZY5 108 aa20.32■□□□□ 0.84
CHMP2A-203ENST00000597209 TRAPPC12Q8WVT3 735 aa20.32■□□□□ 0.84
CHMP2A-203ENST00000597209 TSPYL2Q9H2G4 693 aaPredicted RBP20.32■□□□□ 0.84
CHMP2A-203ENST00000597209 PRDM6Q9NQX0 595 aa20.32■□□□□ 0.84
CHMP2A-203ENST00000597209 THEGQ9P2T0 379 aa20.32■□□□□ 0.84
CHMP2A-203ENST00000597209 TCEAL9Q9UHQ7 104 aa20.32■□□□□ 0.84
CHMP2A-203ENST00000597209 PCDHA10Q9Y5I2 948 aa20.32■□□□□ 0.84
CHMP2A-203ENST00000597209 TRPV2Q9Y5S1 764 aa20.32■□□□□ 0.84
CHMP2A-203ENST00000597209 RBAK-RBAKDNI3L0D1 243 aa20.31■□□□□ 0.84
CHMP2A-203ENST00000597209 PFKFB2O60825 505 aa20.31■□□□□ 0.84
CHMP2A-203ENST00000597209 CENPBP07199 599 aaPredicted RBP20.31■□□□□ 0.84
CHMP2A-203ENST00000597209 ATP4AP20648 1035 aa20.31■□□□□ 0.84
CHMP2A-203ENST00000597209 SCRN1Q12765 414 aa20.31■□□□□ 0.84
CHMP2A-203ENST00000597209 TJAP1Q5JTD0 557 aa20.31■□□□□ 0.84
CHMP2A-203ENST00000597209 TBCKQ8TEA7 893 aa20.31■□□□□ 0.84
CHMP2A-203ENST00000597209 BBXQ8WY36 941 aaPredicted RBP20.31■□□□□ 0.84
CHMP2A-203ENST00000597209 ZBTB10Q96DT7 871 aa20.31■□□□□ 0.84
CHMP2A-203ENST00000597209 SAMD11Q96NU1 681 aa20.31■□□□□ 0.84
CHMP2A-203ENST00000597209 RIT2Q99578 217 aa20.31■□□□□ 0.84
CHMP2A-203ENST00000597209 FAM49AQ9H0Q0 323 aaPredicted RBP20.31■□□□□ 0.84
CHMP2A-203ENST00000597209 SLKQ9H2G2 1235 aaPredicted RBP20.31■□□□□ 0.84
CHMP2A-203ENST00000597209 STK36Q9NRP7 1315 aa20.3■□□□□ 0.84
CHMP2A-203ENST00000597209 CYP3A7-CYP3A51PA0A087WV96 503 aa20.3■□□□□ 0.84
CHMP2A-203ENST00000597209 M0QZ92 97 aa20.3■□□□□ 0.84
CHMP2A-203ENST00000597209 MSH4O15457 936 aa20.3■□□□□ 0.84
CHMP2A-203ENST00000597209 CYP3A7P24462 503 aa20.3■□□□□ 0.84
CHMP2A-203ENST00000597209 KLRC1P26715 233 aa20.3■□□□□ 0.84
CHMP2A-203ENST00000597209 NPY5RQ15761 445 aa20.3■□□□□ 0.84
CHMP2A-203ENST00000597209 Q4G0T1 1027 aa20.3■□□□□ 0.84
CHMP2A-203ENST00000597209 MOXD1Q6UVY6 613 aa20.3■□□□□ 0.84
CHMP2A-203ENST00000597209 SLC5A5Q92911 643 aa20.3■□□□□ 0.84
CHMP2A-203ENST00000597209 CELF4Q9BZC1 486 aaKnown RBP20.3■□□□□ 0.84
CHMP2A-203ENST00000597209 SUGCTQ9HAC7 445 aa20.3■□□□□ 0.84
CHMP2A-203ENST00000597209 TPCN1Q9ULQ1 816 aa20.3■□□□□ 0.84
CHMP2A-203ENST00000597209 A0A0C4DFX4 3053 aa20.29■□□□□ 0.84
CHMP2A-203ENST00000597209 WDR64B1ANS9 1081 aa20.29■□□□□ 0.84
CHMP2A-203ENST00000597209 ENPP3O14638 875 aa20.29■□□□□ 0.84
CHMP2A-203ENST00000597209 MBOAT7Q96N66 472 aa20.29■□□□□ 0.84
CHMP2A-203ENST00000597209 UIMC1Q96RL1 719 aa20.29■□□□□ 0.84
CHMP2A-203ENST00000597209 YME1L1Q96TA2 773 aa20.29■□□□□ 0.84
CHMP2A-203ENST00000597209 FTHL17Q9BXU8 183 aa20.29■□□□□ 0.84
CHMP2A-203ENST00000597209 AGO3Q9H9G7 860 aaKnown RBP20.29■□□□□ 0.84
CHMP2A-203ENST00000597209 TRANK1O15050 2925 aa20.29■□□□□ 0.84
CHMP2A-203ENST00000597209 COL4A4P53420 1690 aaPredicted RBP20.29■□□□□ 0.84
CHMP2A-203ENST00000597209 IGSF9BQ9UPX0 1349 aa20.28■□□□□ 0.84
CHMP2A-203ENST00000597209 ZBTB42B2RXF5 422 aa20.28■□□□□ 0.84
CHMP2A-203ENST00000597209 UPP2O95045 317 aa20.28■□□□□ 0.84
CHMP2A-203ENST00000597209 SFNP31947 248 aa20.28■□□□□ 0.84
CHMP2A-203ENST00000597209 MRPS5P82675 430 aaKnown RBP20.28■□□□□ 0.84
CHMP2A-203ENST00000597209 MICALL1Q8N3F8 863 aa20.28■□□□□ 0.84
CHMP2A-203ENST00000597209 FAM167AQ96KS9 214 aa20.28■□□□□ 0.84
CHMP2A-203ENST00000597209 AIFM3Q96NN9 605 aa20.28■□□□□ 0.84
CHMP2A-203ENST00000597209 ASB2Q96Q27 587 aa20.28■□□□□ 0.84
CHMP2A-203ENST00000597209 PHF20Q9BVI0 1012 aa20.28■□□□□ 0.84
CHMP2A-203ENST00000597209 TEKT3Q9BXF9 490 aa20.28■□□□□ 0.84
CHMP2A-203ENST00000597209 GABBR1Q9UBS5 961 aa20.28■□□□□ 0.84
CHMP2A-203ENST00000597209 CEP131Q9UPN4 1083 aa20.28■□□□□ 0.84
CHMP2A-203ENST00000597209 XBP1P17861 261 aa20.27■□□□□ 0.84
CHMP2A-203ENST00000597209 CD52P31358 61 aa20.27■□□□□ 0.84
CHMP2A-203ENST00000597209 JAK3P52333 1124 aa20.27■□□□□ 0.84
CHMP2A-203ENST00000597209 AK2P54819 239 aa20.27■□□□□ 0.84
CHMP2A-203ENST00000597209 NONOQ15233 471 aaKnown RBP eCLIP20.27■□□□□ 0.84
CHMP2A-203ENST00000597209 KRT25Q7Z3Z0 450 aa20.27■□□□□ 0.84
CHMP2A-203ENST00000597209 CKAP2LQ8IYA6 745 aa20.27■□□□□ 0.84
CHMP2A-203ENST00000597209 KIAA0319LQ8IZA0 1049 aa20.27■□□□□ 0.84
CHMP2A-203ENST00000597209 RDM1Q8NG50 284 aa20.27■□□□□ 0.84
CHMP2A-203ENST00000597209 DISC1Q9NRI5 854 aa20.27■□□□□ 0.84
CHMP2A-203ENST00000597209 PRUNE2Q8WUY3 3088 aa20.27■□□□□ 0.84
CHMP2A-203ENST00000597209 MYH9P35579 1960 aaKnown RBP20.26■□□□□ 0.83
CHMP2A-203ENST00000597209 GAS7O60861 476 aa20.26■□□□□ 0.83
CHMP2A-203ENST00000597209 PSMD10O75832 226 aa20.26■□□□□ 0.83
CHMP2A-203ENST00000597209 C22orf31O95567 290 aa20.26■□□□□ 0.83
CHMP2A-203ENST00000597209 TMEM62Q0P6H9 643 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms