RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 PCDHB12Q9Y5F1 795 aa10.05□□□□□ -0.8
SMAD4-215ENST00000592911 TPRP12270 2363 aaKnown RBP10.05□□□□□ -0.8
SMAD4-215ENST00000592911 NEDD4P46934 1319 aa10.05□□□□□ -0.8
SMAD4-215ENST00000592911 A0A0D9SFI3 127 aa10.04□□□□□ -0.8
SMAD4-215ENST00000592911 PALM3A6NDB9 673 aaPredicted RBP10.04□□□□□ -0.8
SMAD4-215ENST00000592911 M0QZ92 97 aa10.04□□□□□ -0.8
SMAD4-215ENST00000592911 HIP1O00291 1037 aa10.04□□□□□ -0.8
SMAD4-215ENST00000592911 PIK3CDO00329 1044 aa10.04□□□□□ -0.8
SMAD4-215ENST00000592911 MAFGO15525 162 aa10.04□□□□□ -0.8
SMAD4-215ENST00000592911 GLP2RO95838 553 aa10.04□□□□□ -0.8
SMAD4-215ENST00000592911 GHRP10912 638 aa10.04□□□□□ -0.8
SMAD4-215ENST00000592911 CLUL1Q15846 466 aa10.04□□□□□ -0.8
SMAD4-215ENST00000592911 DUSP6Q16828 381 aa10.04□□□□□ -0.8
SMAD4-215ENST00000592911 PCNX4Q63HM2 1172 aa10.04□□□□□ -0.8
SMAD4-215ENST00000592911 NLRX1Q86UT6 975 aa10.04□□□□□ -0.8
SMAD4-215ENST00000592911 POF1BQ8WVV4 589 aa10.04□□□□□ -0.8
SMAD4-215ENST00000592911 GPRASP2Q96D09 838 aa10.04□□□□□ -0.8
SMAD4-215ENST00000592911 IGFLR1Q9H665 355 aa10.04□□□□□ -0.8
SMAD4-215ENST00000592911 RIOX1Q9H6W3 641 aa10.04□□□□□ -0.8
SMAD4-215ENST00000592911 TLE6Q9H808 572 aa10.04□□□□□ -0.8
SMAD4-215ENST00000592911 TLR9Q9NR96 1032 aa10.04□□□□□ -0.8
SMAD4-215ENST00000592911 C1orf112Q9NSG2 853 aa10.04□□□□□ -0.8
SMAD4-215ENST00000592911 TUBE1Q9UJT0 475 aa10.04□□□□□ -0.8
SMAD4-215ENST00000592911 MRPL42Q9Y6G3 142 aaKnown RBP10.04□□□□□ -0.8
SMAD4-215ENST00000592911 DMDP11532 3685 aa10.04□□□□□ -0.8
SMAD4-215ENST00000592911 VPS13AQ96RL7 3174 aa10.03□□□□□ -0.8
SMAD4-215ENST00000592911 PNMA6FA0A0J9YX94 578 aa10.03□□□□□ -0.8
SMAD4-215ENST00000592911 PRR23AA6NEV1 266 aa10.03□□□□□ -0.8
SMAD4-215ENST00000592911 KLRF2D3W0D1 207 aa10.03□□□□□ -0.8
SMAD4-215ENST00000592911 LINC01565O15544 149 aa10.03□□□□□ -0.8
SMAD4-215ENST00000592911 KDM4AO75164 1064 aa10.03□□□□□ -0.8
SMAD4-215ENST00000592911 SMARCA1P28370 1054 aa10.03□□□□□ -0.8
SMAD4-215ENST00000592911 NRIP1P48552 1158 aa10.03□□□□□ -0.8
SMAD4-215ENST00000592911 PDE1AP54750 535 aa10.03□□□□□ -0.8
SMAD4-215ENST00000592911 HAND2P61296 217 aa10.03□□□□□ -0.8
SMAD4-215ENST00000592911 MRPS6P82932 125 aaKnown RBP10.03□□□□□ -0.8
SMAD4-215ENST00000592911 PPFIA1Q13136 1202 aa10.03□□□□□ -0.8
SMAD4-215ENST00000592911 MTMR3Q13615 1198 aa10.03□□□□□ -0.8
SMAD4-215ENST00000592911 KCNC3Q14003 757 aa10.03□□□□□ -0.8
SMAD4-215ENST00000592911 IMMTQ16891 758 aaKnown RBP10.03□□□□□ -0.8
SMAD4-215ENST00000592911 IFIT1BQ5T764 474 aaKnown RBP10.03□□□□□ -0.8
SMAD4-215ENST00000592911 CYFIP1Q7L576 1253 aa10.03□□□□□ -0.8
SMAD4-215ENST00000592911 ZNF589Q86UQ0 364 aaPredicted RBP10.03□□□□□ -0.8
SMAD4-215ENST00000592911 ZNF710Q8N1W2 664 aa10.03□□□□□ -0.8
SMAD4-215ENST00000592911 KLHL23Q8NBE8 558 aa10.03□□□□□ -0.8
SMAD4-215ENST00000592911 IL31RAQ8NI17 732 aa10.03□□□□□ -0.8
SMAD4-215ENST00000592911 OXER1Q8TDS5 423 aa10.03□□□□□ -0.8
SMAD4-215ENST00000592911 PTCD2Q8WV60 388 aaKnown RBP10.03□□□□□ -0.8
SMAD4-215ENST00000592911 SEPT1Q8WYJ6 367 aa10.03□□□□□ -0.8
SMAD4-215ENST00000592911 FAM227BQ96M60 508 aa10.03□□□□□ -0.8
SMAD4-215ENST00000592911 DSCC1Q9BVC3 393 aa10.03□□□□□ -0.8
SMAD4-215ENST00000592911 SEMA4AQ9H3S1 761 aa10.03□□□□□ -0.8
SMAD4-215ENST00000592911 SMARCAD1Q9H4L7 1026 aa10.03□□□□□ -0.8
SMAD4-215ENST00000592911 NGRNQ9NPE2 291 aaKnown RBP10.03□□□□□ -0.8
SMAD4-215ENST00000592911 SORCS3Q9UPU3 1222 aa10.03□□□□□ -0.8
SMAD4-215ENST00000592911 IGSF9BQ9UPX0 1349 aa10.03□□□□□ -0.8
SMAD4-215ENST00000592911 FSCN2O14926 492 aa10.02□□□□□ -0.81
SMAD4-215ENST00000592911 SNPHO15079 494 aa10.02□□□□□ -0.81
SMAD4-215ENST00000592911 SCG2P13521 617 aa10.02□□□□□ -0.81
SMAD4-215ENST00000592911 GTF2F1P35269 517 aaKnown RBP eCLIP10.02□□□□□ -0.81
SMAD4-215ENST00000592911 SARSP49591 514 aaKnown RBP10.02□□□□□ -0.81
SMAD4-215ENST00000592911 SLC26A2P50443 739 aa10.02□□□□□ -0.81
SMAD4-215ENST00000592911 CLCN5P51795 746 aa10.02□□□□□ -0.81
SMAD4-215ENST00000592911 MRPS9P82933 396 aaKnown RBP10.02□□□□□ -0.81
SMAD4-215ENST00000592911 PLCB3Q01970 1234 aa10.02□□□□□ -0.81
SMAD4-215ENST00000592911 ITIH3Q06033 890 aa10.02□□□□□ -0.81
SMAD4-215ENST00000592911 GRIK4Q16099 956 aa10.02□□□□□ -0.81
SMAD4-215ENST00000592911 TPRNQ4KMQ1 711 aa10.02□□□□□ -0.81
SMAD4-215ENST00000592911 MAP3K14Q99558 947 aa10.02□□□□□ -0.81
SMAD4-215ENST00000592911 CPVLQ9H3G5 476 aa10.02□□□□□ -0.81
SMAD4-215ENST00000592911 ZSWIM5Q9P217 1185 aa10.02□□□□□ -0.81
SMAD4-215ENST00000592911 PUF60Q9UHX1 559 aaKnown RBP10.02□□□□□ -0.81
SMAD4-215ENST00000592911 MAD2L2Q9UI95 211 aa10.02□□□□□ -0.81
SMAD4-215ENST00000592911 CDY2AQ9Y6F7 541 aa10.02□□□□□ -0.81
SMAD4-215ENST00000592911 MYH9P35579 1960 aaKnown RBP10.02□□□□□ -0.81
SMAD4-215ENST00000592911 ZNF292O60281 2723 aa10.02□□□□□ -0.81
SMAD4-215ENST00000592911 EVPLQ92817 2033 aa10.02□□□□□ -0.81
SMAD4-215ENST00000592911 FANCMQ8IYD8 2048 aa10.01□□□□□ -0.81
SMAD4-215ENST00000592911 CEP250Q9BV73 2442 aa10.01□□□□□ -0.81
SMAD4-215ENST00000592911 HOXA2O43364 376 aa10.01□□□□□ -0.81
SMAD4-215ENST00000592911 PPP1R11O60927 126 aaPredicted RBP10.01□□□□□ -0.81
SMAD4-215ENST00000592911 LAG3P18627 525 aa10.01□□□□□ -0.81
SMAD4-215ENST00000592911 DNAJB1P25685 340 aa10.01□□□□□ -0.81
SMAD4-215ENST00000592911 HOXA13P31271 388 aaPredicted RBP10.01□□□□□ -0.81
SMAD4-215ENST00000592911 PPM1AP35813 382 aa10.01□□□□□ -0.81
SMAD4-215ENST00000592911 TCF7P36402 384 aaPredicted RBP10.01□□□□□ -0.81
SMAD4-215ENST00000592911 VCPP55072 806 aaKnown RBP10.01□□□□□ -0.81
SMAD4-215ENST00000592911 PAK2Q13177 524 aa10.01□□□□□ -0.81
SMAD4-215ENST00000592911 SEMA3FQ13275 785 aa10.01□□□□□ -0.81
SMAD4-215ENST00000592911 NMIQ13287 307 aaPredicted RBP10.01□□□□□ -0.81
SMAD4-215ENST00000592911 AAMPQ13685 434 aa10.01□□□□□ -0.81
SMAD4-215ENST00000592911 SEC23AQ15436 765 aa10.01□□□□□ -0.81
SMAD4-215ENST00000592911 ADGRD2Q7Z7M1 963 aa10.01□□□□□ -0.81
SMAD4-215ENST00000592911 OTUD7AQ8TE49 926 aaPredicted RBP10.01□□□□□ -0.81
SMAD4-215ENST00000592911 CASP10Q92851 521 aa10.01□□□□□ -0.81
SMAD4-215ENST00000592911 CUL5Q93034 780 aa10.01□□□□□ -0.81
SMAD4-215ENST00000592911 NKD2Q969F2 451 aaPredicted RBP10.01□□□□□ -0.81
SMAD4-215ENST00000592911 BORCS6Q96GS4 357 aa10.01□□□□□ -0.81
SMAD4-215ENST00000592911 RPGRIP1Q96KN7 1286 aa10.01□□□□□ -0.81
SMAD4-215ENST00000592911 ZKSCAN3Q9BRR0 538 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms