RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 SMARCAD1Q9H4L7 1026 aa19.91■□□□□ 0.78
RETREG3-210ENST00000590541 IGSF9BQ9UPX0 1349 aa19.91■□□□□ 0.78
RETREG3-210ENST00000590541 PLXNA3P51805 1871 aa19.9■□□□□ 0.78
RETREG3-210ENST00000590541 H0Y858 1186 aa19.9■□□□□ 0.78
RETREG3-210ENST00000590541 PDGFBP01127 241 aaPredicted RBP19.9■□□□□ 0.78
RETREG3-210ENST00000590541 RPLP2P05387 115 aaKnown RBP19.9■□□□□ 0.78
RETREG3-210ENST00000590541 ITGB5P18084 799 aa19.9■□□□□ 0.78
RETREG3-210ENST00000590541 UBE3AQ05086 875 aa19.9■□□□□ 0.78
RETREG3-210ENST00000590541 DUSP6Q16828 381 aa19.9■□□□□ 0.78
RETREG3-210ENST00000590541 CUL5Q93034 780 aa19.9■□□□□ 0.78
RETREG3-210ENST00000590541 PCYT2Q99447 389 aa19.9■□□□□ 0.78
RETREG3-210ENST00000590541 S1PR5Q9H228 398 aa19.9■□□□□ 0.78
RETREG3-210ENST00000590541 TLR9Q9NR96 1032 aa19.9■□□□□ 0.78
RETREG3-210ENST00000590541 RRN3P2A6NIE6 340 aa19.89■□□□□ 0.77
RETREG3-210ENST00000590541 IFIT3O14879 490 aaKnown RBP19.89■□□□□ 0.77
RETREG3-210ENST00000590541 ERVFC1P60507 584 aa19.89■□□□□ 0.77
RETREG3-210ENST00000590541 PAK2Q13177 524 aa19.89■□□□□ 0.77
RETREG3-210ENST00000590541 KCNC3Q14003 757 aa19.89■□□□□ 0.77
RETREG3-210ENST00000590541 CDHR1Q96JP9 859 aa19.89■□□□□ 0.77
RETREG3-210ENST00000590541 NEK1Q96PY6 1258 aa19.89■□□□□ 0.77
RETREG3-210ENST00000590541 CDCA3Q99618 268 aaPredicted RBP19.89■□□□□ 0.77
RETREG3-210ENST00000590541 CELF4Q9BZC1 486 aaKnown RBP19.89■□□□□ 0.77
RETREG3-210ENST00000590541 MYO15AQ9UKN7 3530 aa19.89■□□□□ 0.77
RETREG3-210ENST00000590541 LRFN2Q9ULH4 789 aa19.89■□□□□ 0.77
RETREG3-210ENST00000590541 TMEM184AQ6ZMB5 413 aa19.88■□□□□ 0.77
RETREG3-210ENST00000590541 RIPOR3Q96MK2 946 aa19.88■□□□□ 0.77
RETREG3-210ENST00000590541 PKD2L1Q9P0L9 805 aa19.88■□□□□ 0.77
RETREG3-210ENST00000590541 HCSTQ9UBK5 93 aa19.88■□□□□ 0.77
RETREG3-210ENST00000590541 PCDHB12Q9Y5F1 795 aa19.88■□□□□ 0.77
RETREG3-210ENST00000590541 PCDHA2Q9Y5H9 948 aa19.88■□□□□ 0.77
RETREG3-210ENST00000590541 UBIAD1Q9Y5Z9 338 aa19.88■□□□□ 0.77
RETREG3-210ENST00000590541 CACNA1HO95180 2353 aa19.88■□□□□ 0.77
RETREG3-210ENST00000590541 LOXHD1Q8IVV2 1947 aa19.88■□□□□ 0.77
RETREG3-210ENST00000590541 ZFHX2Q9C0A1 2572 aaPredicted RBP19.88■□□□□ 0.77
RETREG3-210ENST00000590541 KDM3AQ9Y4C1 1321 aa19.87■□□□□ 0.77
RETREG3-210ENST00000590541 PROB1E7EW31 1015 aa19.87■□□□□ 0.77
RETREG3-210ENST00000590541 M0QZ92 97 aa19.87■□□□□ 0.77
RETREG3-210ENST00000590541 FSCN2O14926 492 aa19.87■□□□□ 0.77
RETREG3-210ENST00000590541 MGEA5O60502 916 aa19.87■□□□□ 0.77
RETREG3-210ENST00000590541 FGF18O76093 207 aa19.87■□□□□ 0.77
RETREG3-210ENST00000590541 CHMLP26374 656 aa19.87■□□□□ 0.77
RETREG3-210ENST00000590541 SARSP49591 514 aaKnown RBP19.87■□□□□ 0.77
RETREG3-210ENST00000590541 TRDNQ13061 729 aa19.87■□□□□ 0.77
RETREG3-210ENST00000590541 WTAPQ15007 396 aa19.87■□□□□ 0.77
RETREG3-210ENST00000590541 TMEM266Q2M3C6 531 aa19.87■□□□□ 0.77
RETREG3-210ENST00000590541 TRAPPC12Q8WVT3 735 aa19.87■□□□□ 0.77
RETREG3-210ENST00000590541 FNDC1Q4ZHG4 1894 aaPredicted RBP19.86■□□□□ 0.77
RETREG3-210ENST00000590541 ERICH2A1L162 156 aa19.86■□□□□ 0.77
RETREG3-210ENST00000590541 FSD2A1L4K1 749 aa19.86■□□□□ 0.77
RETREG3-210ENST00000590541 CYP21A2P08686 494 aa19.86■□□□□ 0.77
RETREG3-210ENST00000590541 IBSPP21815 317 aaPredicted RBP19.86■□□□□ 0.77
RETREG3-210ENST00000590541 NUBP1P53384 320 aa19.86■□□□□ 0.77
RETREG3-210ENST00000590541 FOXK2Q01167 660 aa19.86■□□□□ 0.77
RETREG3-210ENST00000590541 MTMR1Q13613 665 aa19.86■□□□□ 0.77
RETREG3-210ENST00000590541 SPOUT1Q5T280 376 aaKnown RBP19.86■□□□□ 0.77
RETREG3-210ENST00000590541 ANKRD54Q6NXT1 300 aa19.86■□□□□ 0.77
RETREG3-210ENST00000590541 SYCE2Q6PIF2 218 aa19.86■□□□□ 0.77
RETREG3-210ENST00000590541 ASCL5Q7RTU5 278 aa19.86■□□□□ 0.77
RETREG3-210ENST00000590541 SPZ1Q9BXG8 430 aa19.86■□□□□ 0.77
RETREG3-210ENST00000590541 AAASQ9NRG9 546 aa19.86■□□□□ 0.77
RETREG3-210ENST00000590541 PCDHB7Q9Y5E2 793 aa19.86■□□□□ 0.77
RETREG3-210ENST00000590541 TBKBP1A7MCY6 615 aa19.85■□□□□ 0.77
RETREG3-210ENST00000590541 GALR2O43603 387 aaPredicted RBP19.85■□□□□ 0.77
RETREG3-210ENST00000590541 PLCB4Q15147 1175 aa19.85■□□□□ 0.77
RETREG3-210ENST00000590541 FAM102BQ5T8I3 360 aa19.85■□□□□ 0.77
RETREG3-210ENST00000590541 PDE12Q6L8Q7 609 aaKnown RBP19.85■□□□□ 0.77
RETREG3-210ENST00000590541 COLGALT1Q8NBJ5 622 aa19.85■□□□□ 0.77
RETREG3-210ENST00000590541 RRP36Q96EU6 259 aaKnown RBP19.85■□□□□ 0.77
RETREG3-210ENST00000590541 APOL5Q9BWW9 433 aa19.85■□□□□ 0.77
RETREG3-210ENST00000590541 ERVK-5Q9HDB9 667 aa19.85■□□□□ 0.77
RETREG3-210ENST00000590541 TMEM260Q9NX78 707 aa19.85■□□□□ 0.77
RETREG3-210ENST00000590541 TRPC6Q9Y210 931 aa19.85■□□□□ 0.77
RETREG3-210ENST00000590541 TAF6LQ9Y6J9 622 aa19.85■□□□□ 0.77
RETREG3-210ENST00000590541 U3KPZ7 1027 aaPredicted RBP19.85■□□□□ 0.77
RETREG3-210ENST00000590541 SMIM35A0A1B0GVV1 85 aa19.84■□□□□ 0.77
RETREG3-210ENST00000590541 SP100P23497 879 aaPredicted RBP19.84■□□□□ 0.77
RETREG3-210ENST00000590541 TECP42680 631 aa19.84■□□□□ 0.77
RETREG3-210ENST00000590541 KRT76Q01546 638 aa19.84■□□□□ 0.77
RETREG3-210ENST00000590541 NFX1Q12986 1120 aaKnown RBP19.84■□□□□ 0.77
RETREG3-210ENST00000590541 CATIPQ7Z7H3 387 aa19.84■□□□□ 0.77
RETREG3-210ENST00000590541 ZBTB33Q86T24 672 aa19.84■□□□□ 0.77
RETREG3-210ENST00000590541 THNSL1Q8IYQ7 743 aa19.84■□□□□ 0.77
RETREG3-210ENST00000590541 NME8Q8N427 588 aa19.84■□□□□ 0.77
RETREG3-210ENST00000590541 RASGRP4Q8TDF6 673 aa19.84■□□□□ 0.77
RETREG3-210ENST00000590541 CWH43Q9H720 699 aa19.84■□□□□ 0.77
RETREG3-210ENST00000590541 JADE2Q9NQC1 790 aa19.84■□□□□ 0.77
RETREG3-210ENST00000590541 TYW1Q9NV66 732 aaKnown RBP19.84■□□□□ 0.77
RETREG3-210ENST00000590541 MAFGO15525 162 aa19.83■□□□□ 0.77
RETREG3-210ENST00000590541 ANTXR2P58335 489 aa19.83■□□□□ 0.77
RETREG3-210ENST00000590541 APOBRQ0VD83 1088 aa19.83■□□□□ 0.77
RETREG3-210ENST00000590541 PLPP4Q5VZY2 271 aa19.83■□□□□ 0.77
RETREG3-210ENST00000590541 MTHFD1LQ6UB35 978 aa19.83■□□□□ 0.77
RETREG3-210ENST00000590541 KREMEN2Q8NCW0 462 aa19.83■□□□□ 0.77
RETREG3-210ENST00000590541 IGDCC4Q8TDY8 1250 aa19.83■□□□□ 0.77
RETREG3-210ENST00000590541 AZI2Q9H6S1 392 aa19.83■□□□□ 0.77
RETREG3-210ENST00000590541 PSTPIP2Q9H939 334 aa19.83■□□□□ 0.77
RETREG3-210ENST00000590541 CDHR5Q9HBB8 845 aa19.83■□□□□ 0.77
RETREG3-210ENST00000590541 JPH1Q9HDC5 661 aaPredicted RBP19.83■□□□□ 0.77
RETREG3-210ENST00000590541 RGS18Q9NS28 235 aa19.83■□□□□ 0.77
RETREG3-210ENST00000590541 SLC9A2Q9UBY0 812 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms