RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 PKD2L1Q9P0L9 805 aa31.49■■■□□ 2.63
CTDNEP1-210ENST00000574322 CCL15-CCL14A0A0B4J2E2 113 aa31.48■■■□□ 2.63
CTDNEP1-210ENST00000574322 MANSC4A6NHS7 340 aaPredicted RBP31.48■■■□□ 2.63
CTDNEP1-210ENST00000574322 AKR1B15C9JRZ8 316 aaPredicted RBP31.48■■■□□ 2.63
CTDNEP1-210ENST00000574322 TBCAO75347 108 aaKnown RBP31.48■■■□□ 2.63
CTDNEP1-210ENST00000574322 TPM2P07951 284 aa31.48■■■□□ 2.63
CTDNEP1-210ENST00000574322 ZNF131P52739 623 aa31.48■■■□□ 2.63
CTDNEP1-210ENST00000574322 FKBP3Q00688 224 aaKnown RBP31.48■■■□□ 2.63
CTDNEP1-210ENST00000574322 UBXN1Q04323 297 aa31.48■■■□□ 2.63
CTDNEP1-210ENST00000574322 CCL15Q16663 113 aa31.48■■■□□ 2.63
CTDNEP1-210ENST00000574322 SFR1Q86XK3 245 aa31.48■■■□□ 2.63
CTDNEP1-210ENST00000574322 BANK1Q8NDB2 785 aa31.48■■■□□ 2.63
CTDNEP1-210ENST00000574322 TBC1D7Q9P0N9 293 aa31.48■■■□□ 2.63
CTDNEP1-210ENST00000574322 ODF2LQ9ULJ1 636 aa31.48■■■□□ 2.63
CTDNEP1-210ENST00000574322 ZBTB39O15060 712 aa31.47■■■□□ 2.63
CTDNEP1-210ENST00000574322 STX10O60499 249 aa31.47■■■□□ 2.63
CTDNEP1-210ENST00000574322 AOC2O75106 756 aa31.47■■■□□ 2.63
CTDNEP1-210ENST00000574322 RGS20O76081 388 aa31.47■■■□□ 2.63
CTDNEP1-210ENST00000574322 GUCY2CP25092 1073 aa31.47■■■□□ 2.63
CTDNEP1-210ENST00000574322 QARSP47897 775 aaKnown RBP31.47■■■□□ 2.63
CTDNEP1-210ENST00000574322 HERVK_113P62684 666 aa31.47■■■□□ 2.63
CTDNEP1-210ENST00000574322 ZNF746Q6NUN9 644 aaPredicted RBP31.47■■■□□ 2.63
CTDNEP1-210ENST00000574322 CEP63Q96MT8 703 aa31.47■■■□□ 2.63
CTDNEP1-210ENST00000574322 SEL1LQ9UBV2 794 aa31.47■■■□□ 2.63
CTDNEP1-210ENST00000574322 NFASCO94856 1347 aa31.47■■■□□ 2.63
CTDNEP1-210ENST00000574322 RBL2Q08999 1139 aa31.46■■■□□ 2.63
CTDNEP1-210ENST00000574322 EDRF1Q3B7T1 1238 aa31.46■■■□□ 2.63
CTDNEP1-210ENST00000574322 CREBRFQ8IUR6 639 aa31.46■■■□□ 2.63
CTDNEP1-210ENST00000574322 CCDC51Q96ER9 411 aa31.46■■■□□ 2.63
CTDNEP1-210ENST00000574322 ZIC5Q96T25 663 aa31.46■■■□□ 2.63
CTDNEP1-210ENST00000574322 WDR64B1ANS9 1081 aa31.46■■■□□ 2.63
CTDNEP1-210ENST00000574322 CNMDO75829 334 aa31.46■■■□□ 2.63
CTDNEP1-210ENST00000574322 MIIPQ5JXC2 388 aa31.46■■■□□ 2.63
CTDNEP1-210ENST00000574322 C4orf19Q8IY42 314 aa31.46■■■□□ 2.63
CTDNEP1-210ENST00000574322 BRI3BPQ8WY22 251 aa31.46■■■□□ 2.63
CTDNEP1-210ENST00000574322 ZHX3Q9H4I2 956 aa31.46■■■□□ 2.63
CTDNEP1-210ENST00000574322 KIAA1217Q5T5P2 1943 aa31.45■■■□□ 2.63
CTDNEP1-210ENST00000574322 RSPH10B2B2RC85 870 aa31.45■■■□□ 2.63
CTDNEP1-210ENST00000574322 CCNE2O96020 404 aa31.45■■■□□ 2.63
CTDNEP1-210ENST00000574322 GYPCP04921 128 aa31.45■■■□□ 2.63
CTDNEP1-210ENST00000574322 RSPH10BP0C881 870 aa31.45■■■□□ 2.63
CTDNEP1-210ENST00000574322 KCNA2P16389 499 aa31.45■■■□□ 2.63
CTDNEP1-210ENST00000574322 COPB2P35606 906 aa31.45■■■□□ 2.63
CTDNEP1-210ENST00000574322 CCAR2Q8N163 923 aaKnown RBP31.45■■■□□ 2.63
CTDNEP1-210ENST00000574322 ARHGAP6O43182 974 aa31.44■■■□□ 2.62
CTDNEP1-210ENST00000574322 MTIF2P46199 727 aaKnown RBP31.44■■■□□ 2.62
CTDNEP1-210ENST00000574322 ADKP55263 362 aaKnown RBP31.44■■■□□ 2.62
CTDNEP1-210ENST00000574322 CNGA4Q8IV77 575 aa31.44■■■□□ 2.62
CTDNEP1-210ENST00000574322 ANKRD35Q8N283 1001 aa31.44■■■□□ 2.62
CTDNEP1-210ENST00000574322 BAG1Q99933 345 aaPredicted RBP31.44■■■□□ 2.62
CTDNEP1-210ENST00000574322 TRAF3IP3Q9Y228 551 aa31.44■■■□□ 2.62
CTDNEP1-210ENST00000574322 ARHGEF35A5YM69 484 aa31.44■■■□□ 2.62
CTDNEP1-210ENST00000574322 SPATA31C2B4DYI2 1134 aa31.44■■■□□ 2.62
CTDNEP1-210ENST00000574322 MFAP3LO75121 409 aa31.44■■■□□ 2.62
CTDNEP1-210ENST00000574322 SLC25A27O95847 323 aa31.44■■■□□ 2.62
CTDNEP1-210ENST00000574322 PRKCSHP14314 528 aaPredicted RBP31.44■■■□□ 2.62
CTDNEP1-210ENST00000574322 FECHP22830 423 aa31.44■■■□□ 2.62
CTDNEP1-210ENST00000574322 CASP5P51878 434 aa31.44■■■□□ 2.62
CTDNEP1-210ENST00000574322 GOLGA8FQ08AF8 430 aa31.44■■■□□ 2.62
CTDNEP1-210ENST00000574322 GOLGA8DPQ0D2H9 430 aa31.44■■■□□ 2.62
CTDNEP1-210ENST00000574322 SREBF2Q12772 1141 aa31.44■■■□□ 2.62
CTDNEP1-210ENST00000574322 GNPTABQ3T906 1256 aa31.44■■■□□ 2.62
CTDNEP1-210ENST00000574322 CEP135Q66GS9 1140 aa31.44■■■□□ 2.62
CTDNEP1-210ENST00000574322 E4F1Q66K89 784 aaPredicted RBP31.44■■■□□ 2.62
CTDNEP1-210ENST00000574322 GPAT2Q6NUI2 795 aa31.44■■■□□ 2.62
CTDNEP1-210ENST00000574322 TCEAL9Q9UHQ7 104 aa31.44■■■□□ 2.62
CTDNEP1-210ENST00000574322 EIF3DO15371 548 aaKnown RBP eCLIP31.43■■■□□ 2.62
CTDNEP1-210ENST00000574322 FAM13AO94988 1023 aa31.43■■■□□ 2.62
CTDNEP1-210ENST00000574322 GNA14O95837 355 aa31.43■■■□□ 2.62
CTDNEP1-210ENST00000574322 TPM1P09493 284 aa31.43■■■□□ 2.62
CTDNEP1-210ENST00000574322 OSBPP22059 807 aa31.43■■■□□ 2.62
CTDNEP1-210ENST00000574322 ICAM3P32942 547 aa31.43■■■□□ 2.62
CTDNEP1-210ENST00000574322 MARSP56192 900 aaKnown RBP31.43■■■□□ 2.62
CTDNEP1-210ENST00000574322 INHBEP58166 350 aa31.43■■■□□ 2.62
CTDNEP1-210ENST00000574322 PSMC5P62195 406 aa31.43■■■□□ 2.62
CTDNEP1-210ENST00000574322 KNOP1Q1ED39 458 aaKnown RBP31.43■■■□□ 2.62
CTDNEP1-210ENST00000574322 SMAP1Q8IYB5 467 aaPredicted RBP31.43■■■□□ 2.62
CTDNEP1-210ENST00000574322 NOC4LQ9BVI4 516 aaKnown RBP31.43■■■□□ 2.62
CTDNEP1-210ENST00000574322 NAA15Q9BXJ9 866 aaKnown RBP31.43■■■□□ 2.62
CTDNEP1-210ENST00000574322 MOV10L1Q9BXT6 1211 aaKnown RBP31.43■■■□□ 2.62
CTDNEP1-210ENST00000574322 PARVGQ9HBI0 331 aa31.43■■■□□ 2.62
CTDNEP1-210ENST00000574322 SAMM50Q9Y512 469 aa31.43■■■□□ 2.62
CTDNEP1-210ENST00000574322 EIF3JO75822 258 aaKnown RBP31.42■■■□□ 2.62
CTDNEP1-210ENST00000574322 EEF2KMTQ96G04 330 aa31.42■■■□□ 2.62
CTDNEP1-210ENST00000574322 ERGIC2Q96RQ1 377 aa31.42■■■□□ 2.62
CTDNEP1-210ENST00000574322 B4DLN1 442 aa31.41■■■□□ 2.62
CTDNEP1-210ENST00000574322 PDXKO00764 312 aa31.41■■■□□ 2.62
CTDNEP1-210ENST00000574322 HOXD13P35453 343 aa31.41■■■□□ 2.62
CTDNEP1-210ENST00000574322 STXBP2Q15833 593 aa31.41■■■□□ 2.62
CTDNEP1-210ENST00000574322 MAN2A1Q16706 1144 aa31.41■■■□□ 2.62
CTDNEP1-210ENST00000574322 MRPL44Q9H9J2 332 aaKnown RBP31.41■■■□□ 2.62
CTDNEP1-210ENST00000574322 ASTN1O14525 1302 aa31.41■■■□□ 2.62
CTDNEP1-210ENST00000574322 CASP14P31944 242 aa31.41■■■□□ 2.62
CTDNEP1-210ENST00000574322 PADI6Q6TGC4 694 aa31.41■■■□□ 2.62
CTDNEP1-210ENST00000574322 NELFCDQ8IXH7 590 aa31.41■■■□□ 2.62
CTDNEP1-210ENST00000574322 FIZ1Q96SL8 496 aa31.41■■■□□ 2.62
CTDNEP1-210ENST00000574322 RBPJLQ9UBG7 517 aa31.41■■■□□ 2.62
CTDNEP1-210ENST00000574322 PCDHA10Q9Y5I2 948 aa31.41■■■□□ 2.62
CTDNEP1-210ENST00000574322 UBE4BO95155 1302 aa31.4■■■□□ 2.62
CTDNEP1-210ENST00000574322 BTBD19C9JJ37 291 aa31.4■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms