RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 DNAJB3Q8WWF6 145 aa17.78■□□□□ 0.44
USB1-208ENST00000563207 GLG1Q92896 1179 aa17.78■□□□□ 0.44
USB1-208ENST00000563207 AIFM3Q96NN9 605 aa17.78■□□□□ 0.44
USB1-208ENST00000563207 ANO3Q9BYT9 981 aa17.78■□□□□ 0.44
USB1-208ENST00000563207 NRCAMQ92823 1304 aa17.77■□□□□ 0.44
USB1-208ENST00000563207 LOXHD1Q8IVV2 1947 aa17.77■□□□□ 0.44
USB1-208ENST00000563207 GTPBP6O43824 516 aaPredicted RBP17.77■□□□□ 0.44
USB1-208ENST00000563207 GHRP10912 638 aa17.77■□□□□ 0.44
USB1-208ENST00000563207 BMP1P13497 986 aa17.77■□□□□ 0.44
USB1-208ENST00000563207 ERVK-21P61565 698 aa17.77■□□□□ 0.44
USB1-208ENST00000563207 HTRA4P83105 476 aaPredicted RBP17.77■□□□□ 0.44
USB1-208ENST00000563207 PPFIA1Q13136 1202 aa17.77■□□□□ 0.44
USB1-208ENST00000563207 GRIK4Q16099 956 aa17.77■□□□□ 0.44
USB1-208ENST00000563207 FAM26DQ5JW98 314 aa17.77■□□□□ 0.44
USB1-208ENST00000563207 JAKMIP3Q5VZ66 844 aa17.77■□□□□ 0.44
USB1-208ENST00000563207 BLIDQ8IZY5 108 aa17.77■□□□□ 0.44
USB1-208ENST00000563207 SEPT8Q92599 483 aa17.77■□□□□ 0.44
USB1-208ENST00000563207 BRMS1Q9HCU9 246 aa17.77■□□□□ 0.44
USB1-208ENST00000563207 SMC3Q9UQE7 1217 aa17.77■□□□□ 0.44
USB1-208ENST00000563207 AMHP03971 560 aa17.76■□□□□ 0.43
USB1-208ENST00000563207 GNAT1P11488 350 aa17.76■□□□□ 0.43
USB1-208ENST00000563207 INSRRP14616 1297 aa17.76■□□□□ 0.43
USB1-208ENST00000563207 MGAT3Q09327 533 aa17.76■□□□□ 0.43
USB1-208ENST00000563207 CDHR1Q96JP9 859 aa17.76■□□□□ 0.43
USB1-208ENST00000563207 C8orf76Q96K31 380 aa17.76■□□□□ 0.43
USB1-208ENST00000563207 AGO4Q9HCK5 861 aaKnown RBP17.76■□□□□ 0.43
USB1-208ENST00000563207 JPH1Q9HDC5 661 aaPredicted RBP17.76■□□□□ 0.43
USB1-208ENST00000563207 ERAP1Q9NZ08 941 aa17.76■□□□□ 0.43
USB1-208ENST00000563207 SLC9A2Q9UBY0 812 aa17.76■□□□□ 0.43
USB1-208ENST00000563207 TTC28Q96AY4 2481 aa17.76■□□□□ 0.43
USB1-208ENST00000563207 M0R2N6 131 aa17.75■□□□□ 0.43
USB1-208ENST00000563207 DDX39AO00148 427 aaKnown RBP17.75■□□□□ 0.43
USB1-208ENST00000563207 EFCAB14O75071 495 aa17.75■□□□□ 0.43
USB1-208ENST00000563207 CCNE2O96020 404 aa17.75■□□□□ 0.43
USB1-208ENST00000563207 ACTR2P61160 394 aa17.75■□□□□ 0.43
USB1-208ENST00000563207 TMEM62Q0P6H9 643 aa17.75■□□□□ 0.43
USB1-208ENST00000563207 LPIN1Q14693 890 aa17.75■□□□□ 0.43
USB1-208ENST00000563207 SAFBQ15424 915 aaKnown RBP eCLIP17.75■□□□□ 0.43
USB1-208ENST00000563207 FBXO18Q8NFZ0 1043 aa17.75■□□□□ 0.43
USB1-208ENST00000563207 TOP1MTQ969P6 601 aa17.75■□□□□ 0.43
USB1-208ENST00000563207 TGS1Q96RS0 853 aaKnown RBP17.75■□□□□ 0.43
USB1-208ENST00000563207 IFIH1Q9BYX4 1025 aaKnown RBP17.75■□□□□ 0.43
USB1-208ENST00000563207 FAM49AQ9H0Q0 323 aaPredicted RBP17.75■□□□□ 0.43
USB1-208ENST00000563207 SMARCAD1Q9H4L7 1026 aa17.75■□□□□ 0.43
USB1-208ENST00000563207 TUBE1Q9UJT0 475 aa17.75■□□□□ 0.43
USB1-208ENST00000563207 KCNJ14Q9UNX9 436 aa17.75■□□□□ 0.43
USB1-208ENST00000563207 INSL6Q9Y581 213 aa17.75■□□□□ 0.43
USB1-208ENST00000563207 NLRC5Q86WI3 1866 aa17.75■□□□□ 0.43
USB1-208ENST00000563207 MBLAC1A4D2B0 266 aaPredicted RBP17.74■□□□□ 0.43
USB1-208ENST00000563207 FAM86B1E9PN63 330 aa17.74■□□□□ 0.43
USB1-208ENST00000563207 TNFRSF10AO00220 468 aa17.74■□□□□ 0.43
USB1-208ENST00000563207 MEIS1O00470 390 aa17.74■□□□□ 0.43
USB1-208ENST00000563207 CAND2O75155 1236 aa17.74■□□□□ 0.43
USB1-208ENST00000563207 MMP1P03956 469 aa17.74■□□□□ 0.43
USB1-208ENST00000563207 FAM86B2P0C5J1 330 aa17.74■□□□□ 0.43
USB1-208ENST00000563207 GJB2P29033 226 aa17.74■□□□□ 0.43
USB1-208ENST00000563207 KRT2P35908 639 aa17.74■□□□□ 0.43
USB1-208ENST00000563207 SREBF1P36956 1147 aa17.74■□□□□ 0.43
USB1-208ENST00000563207 PLCB4Q15147 1175 aa17.74■□□□□ 0.43
USB1-208ENST00000563207 NPY5RQ15761 445 aa17.74■□□□□ 0.43
USB1-208ENST00000563207 CEP55Q53EZ4 464 aa17.74■□□□□ 0.43
USB1-208ENST00000563207 SP7Q8TDD2 431 aaPredicted RBP17.74■□□□□ 0.43
USB1-208ENST00000563207 AGO3Q9H9G7 860 aaKnown RBP17.74■□□□□ 0.43
USB1-208ENST00000563207 MAFGO15525 162 aa17.73■□□□□ 0.43
USB1-208ENST00000563207 CYP3A4P08684 503 aa17.73■□□□□ 0.43
USB1-208ENST00000563207 PDCP20941 246 aa17.73■□□□□ 0.43
USB1-208ENST00000563207 KRT25Q7Z3Z0 450 aa17.73■□□□□ 0.43
USB1-208ENST00000563207 RASGRP4Q8TDF6 673 aa17.73■□□□□ 0.43
USB1-208ENST00000563207 CRYGNQ8WXF5 182 aa17.73■□□□□ 0.43
USB1-208ENST00000563207 UHRF1Q96T88 793 aaPredicted RBP17.73■□□□□ 0.43
USB1-208ENST00000563207 CDY2AQ9Y6F7 541 aa17.73■□□□□ 0.43
USB1-208ENST00000563207 ATG2AQ2TAZ0 1938 aa17.72■□□□□ 0.43
USB1-208ENST00000563207 COL4A6Q14031 1691 aa17.72■□□□□ 0.43
USB1-208ENST00000563207 IGLV3-22A0A075B6J6 115 aa17.72■□□□□ 0.43
USB1-208ENST00000563207 DHX15O43143 795 aaKnown RBP17.72■□□□□ 0.43
USB1-208ENST00000563207 EDIL3O43854 480 aa17.72■□□□□ 0.43
USB1-208ENST00000563207 DTNBO60941 627 aa17.72■□□□□ 0.43
USB1-208ENST00000563207 PDIA4P13667 645 aaKnown RBP17.72■□□□□ 0.43
USB1-208ENST00000563207 USP11P51784 963 aa17.72■□□□□ 0.43
USB1-208ENST00000563207 BECN1Q14457 450 aa17.72■□□□□ 0.43
USB1-208ENST00000563207 EPC2Q52LR7 807 aa17.72■□□□□ 0.43
USB1-208ENST00000563207 FBXO47Q5MNV8 452 aa17.72■□□□□ 0.43
USB1-208ENST00000563207 RPAINQ86UA6 219 aa17.72■□□□□ 0.43
USB1-208ENST00000563207 RTN4RL1Q86UN2 441 aaPredicted RBP17.72■□□□□ 0.43
USB1-208ENST00000563207 FBXO22Q8NEZ5 403 aa17.72■□□□□ 0.43
USB1-208ENST00000563207 LINC01599Q8WXQ3 324 aa17.72■□□□□ 0.43
USB1-208ENST00000563207 TSPYL2Q9H2G4 693 aaPredicted RBP17.72■□□□□ 0.43
USB1-208ENST00000563207 GJB4Q9NTQ9 266 aa17.72■□□□□ 0.43
USB1-208ENST00000563207 TRPC6Q9Y210 931 aa17.72■□□□□ 0.43
USB1-208ENST00000563207 NFASCO94856 1347 aa17.72■□□□□ 0.43
USB1-208ENST00000563207 CCDC194A0A1B0GVG4 234 aa17.71■□□□□ 0.43
USB1-208ENST00000563207 ENPP3O14638 875 aa17.71■□□□□ 0.43
USB1-208ENST00000563207 ATG7O95352 703 aa17.71■□□□□ 0.43
USB1-208ENST00000563207 ZNF76P36508 570 aa17.71■□□□□ 0.43
USB1-208ENST00000563207 STAT5BP51692 787 aa17.71■□□□□ 0.43
USB1-208ENST00000563207 NONOQ15233 471 aaKnown RBP eCLIP17.71■□□□□ 0.43
USB1-208ENST00000563207 TAF2Q6P1X5 1199 aa17.71■□□□□ 0.43
USB1-208ENST00000563207 PLA2G4DQ86XP0 818 aa17.71■□□□□ 0.43
USB1-208ENST00000563207 YME1L1Q96TA2 773 aa17.71■□□□□ 0.43
USB1-208ENST00000563207 SDF4Q9BRK5 362 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms