RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 PTH1RQ03431 593 aa13.62□□□□□ -0.23
ACTN1-221ENST00000556571 UBE3AQ05086 875 aa13.62□□□□□ -0.23
ACTN1-221ENST00000556571 IER5LQ5T953 404 aa13.62□□□□□ -0.23
ACTN1-221ENST00000556571 ZNF654Q8IZM8 581 aa13.62□□□□□ -0.23
ACTN1-221ENST00000556571 FBXL6Q8N531 539 aa13.62□□□□□ -0.23
ACTN1-221ENST00000556571 MICAL1Q8TDZ2 1067 aa13.62□□□□□ -0.23
ACTN1-221ENST00000556571 ZBTB10Q96DT7 871 aa13.62□□□□□ -0.23
ACTN1-221ENST00000556571 PCYT2Q99447 389 aa13.62□□□□□ -0.23
ACTN1-221ENST00000556571 CELF4Q9BZC1 486 aaKnown RBP13.62□□□□□ -0.23
ACTN1-221ENST00000556571 TLE6Q9H808 572 aa13.62□□□□□ -0.23
ACTN1-221ENST00000556571 JPH1Q9HDC5 661 aaPredicted RBP13.62□□□□□ -0.23
ACTN1-221ENST00000556571 JADE2Q9NQC1 790 aa13.62□□□□□ -0.23
ACTN1-221ENST00000556571 RNF216Q9NWF9 866 aaPredicted RBP13.62□□□□□ -0.23
ACTN1-221ENST00000556571 PKD2L1Q9P0L9 805 aa13.62□□□□□ -0.23
ACTN1-221ENST00000556571 BARX2Q9UMQ3 279 aaPredicted RBP13.62□□□□□ -0.23
ACTN1-221ENST00000556571 TRPC6Q9Y210 931 aa13.62□□□□□ -0.23
ACTN1-221ENST00000556571 PCDHB12Q9Y5F1 795 aa13.62□□□□□ -0.23
ACTN1-221ENST00000556571 ZFHX2Q9C0A1 2572 aaPredicted RBP13.62□□□□□ -0.23
ACTN1-221ENST00000556571 KDM3AQ9Y4C1 1321 aa13.62□□□□□ -0.23
ACTN1-221ENST00000556571 PTPRZ1P23471 2315 aaPredicted RBP13.61□□□□□ -0.23
ACTN1-221ENST00000556571 SPDYE3A6NKU9 549 aa13.61□□□□□ -0.23
ACTN1-221ENST00000556571 PPFIA3O75145 1194 aa13.61□□□□□ -0.23
ACTN1-221ENST00000556571 GLP2RO95838 553 aa13.61□□□□□ -0.23
ACTN1-221ENST00000556571 ATF7P17544 494 aaPredicted RBP13.61□□□□□ -0.23
ACTN1-221ENST00000556571 SIGLEC14Q08ET2 396 aa13.61□□□□□ -0.23
ACTN1-221ENST00000556571 TMEM62Q0P6H9 643 aa13.61□□□□□ -0.23
ACTN1-221ENST00000556571 PLPPR4Q7Z2D5 763 aa13.61□□□□□ -0.23
ACTN1-221ENST00000556571 MB21D2Q8IYB1 491 aaPredicted RBP13.61□□□□□ -0.23
ACTN1-221ENST00000556571 TMTC2Q8N394 836 aa13.61□□□□□ -0.23
ACTN1-221ENST00000556571 PHOX2BQ99453 314 aa13.61□□□□□ -0.23
ACTN1-221ENST00000556571 CDCA3Q99618 268 aaPredicted RBP13.61□□□□□ -0.23
ACTN1-221ENST00000556571 MTA3Q9BTC8 594 aa13.61□□□□□ -0.23
ACTN1-221ENST00000556571 MYL10Q9BUA6 226 aa13.61□□□□□ -0.23
ACTN1-221ENST00000556571 LY9Q9HBG7 655 aa13.61□□□□□ -0.23
ACTN1-221ENST00000556571 AAASQ9NRG9 546 aa13.61□□□□□ -0.23
ACTN1-221ENST00000556571 SLC9A2Q9UBY0 812 aa13.61□□□□□ -0.23
ACTN1-221ENST00000556571 PCDHB7Q9Y5E2 793 aa13.61□□□□□ -0.23
ACTN1-221ENST00000556571 TAF6LQ9Y6J9 622 aa13.61□□□□□ -0.23
ACTN1-221ENST00000556571 DOCK5Q9H7D0 1870 aa13.61□□□□□ -0.23
ACTN1-221ENST00000556571 SMIM35A0A1B0GVV1 85 aa13.6□□□□□ -0.23
ACTN1-221ENST00000556571 ST18O60284 1047 aa13.6□□□□□ -0.23
ACTN1-221ENST00000556571 SARSP49591 514 aaKnown RBP13.6□□□□□ -0.23
ACTN1-221ENST00000556571 GATMP50440 423 aa13.6□□□□□ -0.23
ACTN1-221ENST00000556571 STAT5BP51692 787 aa13.6□□□□□ -0.23
ACTN1-221ENST00000556571 KRT76Q01546 638 aa13.6□□□□□ -0.23
ACTN1-221ENST00000556571 NFX1Q12986 1120 aaKnown RBP13.6□□□□□ -0.23
ACTN1-221ENST00000556571 PLCB4Q15147 1175 aa13.6□□□□□ -0.23
ACTN1-221ENST00000556571 SPOUT1Q5T280 376 aaKnown RBP13.6□□□□□ -0.23
ACTN1-221ENST00000556571 PDE12Q6L8Q7 609 aaKnown RBP13.6□□□□□ -0.23
ACTN1-221ENST00000556571 SRBD1Q8N5C6 995 aaKnown RBP13.6□□□□□ -0.23
ACTN1-221ENST00000556571 ATP8B4Q8TF62 1192 aa13.6□□□□□ -0.23
ACTN1-221ENST00000556571 RPGRIP1Q96KN7 1286 aa13.6□□□□□ -0.23
ACTN1-221ENST00000556571 TMX1Q9H3N1 280 aa13.6□□□□□ -0.23
ACTN1-221ENST00000556571 TLR9Q9NR96 1032 aa13.6□□□□□ -0.23
ACTN1-221ENST00000556571 KCNH7Q9NS40 1196 aa13.6□□□□□ -0.23
ACTN1-221ENST00000556571 PCDHA6Q9UN73 950 aa13.6□□□□□ -0.23
ACTN1-221ENST00000556571 PCDHA8Q9Y5H6 950 aa13.6□□□□□ -0.23
ACTN1-221ENST00000556571 ATG2AQ2TAZ0 1938 aa13.6□□□□□ -0.23
ACTN1-221ENST00000556571 PER2O15055 1255 aa13.59□□□□□ -0.23
ACTN1-221ENST00000556571 PLEKHA8P1O95397 391 aa13.59□□□□□ -0.23
ACTN1-221ENST00000556571 CHMLP26374 656 aa13.59□□□□□ -0.23
ACTN1-221ENST00000556571 SLC26A2P50443 739 aa13.59□□□□□ -0.23
ACTN1-221ENST00000556571 ACTR2P61160 394 aa13.59□□□□□ -0.23
ACTN1-221ENST00000556571 TCF15Q12870 199 aa13.59□□□□□ -0.23
ACTN1-221ENST00000556571 UBE2SQ16763 222 aa13.59□□□□□ -0.23
ACTN1-221ENST00000556571 ODR4Q5SWX8 454 aa13.59□□□□□ -0.23
ACTN1-221ENST00000556571 TTC22Q5TAA0 569 aa13.59□□□□□ -0.23
ACTN1-221ENST00000556571 CASC1Q6TDU7 716 aa13.59□□□□□ -0.23
ACTN1-221ENST00000556571 MTHFD1LQ6UB35 978 aa13.59□□□□□ -0.23
ACTN1-221ENST00000556571 NFXL1Q6ZNB6 911 aa13.59□□□□□ -0.23
ACTN1-221ENST00000556571 TRAPPC12Q8WVT3 735 aa13.59□□□□□ -0.23
ACTN1-221ENST00000556571 SUSD6Q92537 303 aa13.59□□□□□ -0.23
ACTN1-221ENST00000556571 SNX27Q96L92 541 aa13.59□□□□□ -0.23
ACTN1-221ENST00000556571 NEK1Q96PY6 1258 aa13.59□□□□□ -0.23
ACTN1-221ENST00000556571 MXRA8Q9BRK3 442 aa13.59□□□□□ -0.23
ACTN1-221ENST00000556571 SDF4Q9BRK5 362 aa13.59□□□□□ -0.23
ACTN1-221ENST00000556571 IRF2BPLQ9H1B7 796 aa13.59□□□□□ -0.23
ACTN1-221ENST00000556571 C1orf112Q9NSG2 853 aa13.59□□□□□ -0.23
ACTN1-221ENST00000556571 PCDHGC5Q9Y5F6 944 aa13.59□□□□□ -0.23
ACTN1-221ENST00000556571 NFASCO94856 1347 aa13.59□□□□□ -0.23
ACTN1-221ENST00000556571 CCDC69A6NI79 296 aa13.58□□□□□ -0.24
ACTN1-221ENST00000556571 TBKBP1A7MCY6 615 aa13.58□□□□□ -0.24
ACTN1-221ENST00000556571 RPS6KA5O75582 802 aa13.58□□□□□ -0.24
ACTN1-221ENST00000556571 FGF18O76093 207 aa13.58□□□□□ -0.24
ACTN1-221ENST00000556571 SRGAP2BP0DMP2 458 aa13.58□□□□□ -0.24
ACTN1-221ENST00000556571 CALM1P0DP23 149 aa13.58□□□□□ -0.24
ACTN1-221ENST00000556571 CALM2P0DP24 149 aa13.58□□□□□ -0.24
ACTN1-221ENST00000556571 CALM3P0DP25 149 aa13.58□□□□□ -0.24
ACTN1-221ENST00000556571 GSPT1P15170 499 aaKnown RBP13.58□□□□□ -0.24
ACTN1-221ENST00000556571 DUSP6Q16828 381 aa13.58□□□□□ -0.24
ACTN1-221ENST00000556571 TMEM266Q2M3C6 531 aa13.58□□□□□ -0.24
ACTN1-221ENST00000556571 SLC24A5Q71RS6 500 aa13.58□□□□□ -0.24
ACTN1-221ENST00000556571 MAP4K1Q92918 833 aa13.58□□□□□ -0.24
ACTN1-221ENST00000556571 ERVK-5Q9HDB9 667 aa13.58□□□□□ -0.24
ACTN1-221ENST00000556571 RGS18Q9NS28 235 aa13.58□□□□□ -0.24
ACTN1-221ENST00000556571 DENND3A2RUS2 1198 aa13.57□□□□□ -0.24
ACTN1-221ENST00000556571 SGSM2O43147 1006 aa13.57□□□□□ -0.24
ACTN1-221ENST00000556571 PRC1O43663 620 aa13.57□□□□□ -0.24
ACTN1-221ENST00000556571 ATG7O95352 703 aa13.57□□□□□ -0.24
ACTN1-221ENST00000556571 IBSPP21815 317 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms