RNA–Protein interactions for RNA: ENST00000553999.5

HIF1A-206, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-206ENST00000553999 RRN3P2A6NIE6 340 aa23.36■■□□□ 1.33
HIF1A-206ENST00000553999 GAS7O60861 476 aa23.36■■□□□ 1.33
HIF1A-206ENST00000553999 CAND2O75155 1236 aa23.36■■□□□ 1.33
HIF1A-206ENST00000553999 AMHP03971 560 aa23.36■■□□□ 1.33
HIF1A-206ENST00000553999 TAP1Q03518 808 aa23.36■■□□□ 1.33
HIF1A-206ENST00000553999 NONOQ15233 471 aaKnown RBP eCLIP23.36■■□□□ 1.33
HIF1A-206ENST00000553999 C8orf34Q49A92 452 aa23.36■■□□□ 1.33
HIF1A-206ENST00000553999 LRCH2Q5VUJ6 765 aa23.36■■□□□ 1.33
HIF1A-206ENST00000553999 DAGLBQ8NCG7 672 aa23.36■■□□□ 1.33
HIF1A-206ENST00000553999 GTF3C6Q969F1 213 aa23.36■■□□□ 1.33
HIF1A-206ENST00000553999 PRDM6Q9NQX0 595 aa23.36■■□□□ 1.33
HIF1A-206ENST00000553999 COL6A3P12111 3177 aa23.36■■□□□ 1.33
HIF1A-206ENST00000553999 SIP14410 1827 aa23.36■■□□□ 1.33
HIF1A-206ENST00000553999 IGKV6D-21A0A0A0MT36 114 aa23.35■■□□□ 1.33
HIF1A-206ENST00000553999 CCDC194A0A1B0GVG4 234 aa23.35■■□□□ 1.33
HIF1A-206ENST00000553999 M0R2N6 131 aa23.35■■□□□ 1.33
HIF1A-206ENST00000553999 PSAPP07602 524 aa23.35■■□□□ 1.33
HIF1A-206ENST00000553999 ATP4AP20648 1035 aa23.35■■□□□ 1.33
HIF1A-206ENST00000553999 MRPS6P82932 125 aaKnown RBP23.35■■□□□ 1.33
HIF1A-206ENST00000553999 KRT76Q01546 638 aa23.35■■□□□ 1.33
HIF1A-206ENST00000553999 MGAT3Q09327 533 aa23.35■■□□□ 1.33
HIF1A-206ENST00000553999 LPIN1Q14693 890 aa23.35■■□□□ 1.33
HIF1A-206ENST00000553999 LETM2Q2VYF4 491 aa23.35■■□□□ 1.33
HIF1A-206ENST00000553999 KRT40Q6A162 431 aa23.35■■□□□ 1.33
HIF1A-206ENST00000553999 ZNF746Q6NUN9 644 aaPredicted RBP23.35■■□□□ 1.33
HIF1A-206ENST00000553999 MTHFD1LQ6UB35 978 aa23.35■■□□□ 1.33
HIF1A-206ENST00000553999 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.35■■□□□ 1.33
HIF1A-206ENST00000553999 ATP8B4Q8TF62 1192 aa23.35■■□□□ 1.33
HIF1A-206ENST00000553999 PHF20Q9BVI0 1012 aa23.35■■□□□ 1.33
HIF1A-206ENST00000553999 TEKT3Q9BXF9 490 aa23.35■■□□□ 1.33
HIF1A-206ENST00000553999 UNC45AQ9H3U1 944 aa23.35■■□□□ 1.33
HIF1A-206ENST00000553999 FDPSP14324 419 aaKnown RBP23.34■■□□□ 1.33
HIF1A-206ENST00000553999 KLRC1P26715 233 aa23.34■■□□□ 1.33
HIF1A-206ENST00000553999 USP11P51784 963 aa23.34■■□□□ 1.33
HIF1A-206ENST00000553999 UGCGQ16739 394 aa23.34■■□□□ 1.33
HIF1A-206ENST00000553999 FAM26DQ5JW98 314 aa23.34■■□□□ 1.33
HIF1A-206ENST00000553999 PIK3AP1Q6ZUJ8 805 aa23.34■■□□□ 1.33
HIF1A-206ENST00000553999 KRT25Q7Z3Z0 450 aa23.34■■□□□ 1.33
HIF1A-206ENST00000553999 PCDHA10Q9Y5I2 948 aa23.34■■□□□ 1.33
HIF1A-206ENST00000553999 SLC37A4O43826 429 aa23.33■■□□□ 1.33
HIF1A-206ENST00000553999 HBP1O60381 514 aa23.33■■□□□ 1.33
HIF1A-206ENST00000553999 GJB5O95377 273 aa23.33■■□□□ 1.33
HIF1A-206ENST00000553999 XBP1P17861 261 aa23.33■■□□□ 1.33
HIF1A-206ENST00000553999 CD52P31358 61 aa23.33■■□□□ 1.33
HIF1A-206ENST00000553999 ST3GAL1Q11201 340 aa23.33■■□□□ 1.33
HIF1A-206ENST00000553999 EARS2Q5JPH6 523 aaKnown RBP23.33■■□□□ 1.33
HIF1A-206ENST00000553999 NSUN7Q8NE18 718 aaKnown RBP23.33■■□□□ 1.33
HIF1A-206ENST00000553999 SLC5A5Q92911 643 aa23.33■■□□□ 1.33
HIF1A-206ENST00000553999 C22orf23Q9BZE7 217 aa23.33■■□□□ 1.33
HIF1A-206ENST00000553999 DISC1Q9NRI5 854 aa23.33■■□□□ 1.33
HIF1A-206ENST00000553999 MICAL3Q7RTP6 2002 aa23.32■■□□□ 1.32
HIF1A-206ENST00000553999 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.32■■□□□ 1.32
HIF1A-206ENST00000553999 WDR64B1ANS9 1081 aa23.32■■□□□ 1.32
HIF1A-206ENST00000553999 M0QZ92 97 aa23.32■■□□□ 1.32
HIF1A-206ENST00000553999 EFCAB14O75071 495 aa23.32■■□□□ 1.32
HIF1A-206ENST00000553999 NR5A1Q13285 461 aa23.32■■□□□ 1.32
HIF1A-206ENST00000553999 TMEM266Q2M3C6 531 aa23.32■■□□□ 1.32
HIF1A-206ENST00000553999 FBXO47Q5MNV8 452 aa23.32■■□□□ 1.32
HIF1A-206ENST00000553999 CCDC83Q8IWF9 413 aa23.32■■□□□ 1.32
HIF1A-206ENST00000553999 SMAP1Q8IYB5 467 aaPredicted RBP23.32■■□□□ 1.32
HIF1A-206ENST00000553999 GDPD5Q8WTR4 605 aa23.32■■□□□ 1.32
HIF1A-206ENST00000553999 AGO3Q9H9G7 860 aaKnown RBP23.32■■□□□ 1.32
HIF1A-206ENST00000553999 DDX25Q9UHL0 483 aaKnown RBP23.32■■□□□ 1.32
HIF1A-206ENST00000553999 PCDHA2Q9Y5H9 948 aa23.32■■□□□ 1.32
HIF1A-206ENST00000553999 TRPV2Q9Y5S1 764 aa23.32■■□□□ 1.32
HIF1A-206ENST00000553999 SLC26A2P50443 739 aa23.31■■□□□ 1.32
HIF1A-206ENST00000553999 GUCY1B3Q02153 619 aa23.31■■□□□ 1.32
HIF1A-206ENST00000553999 PRKCEQ02156 737 aa23.31■■□□□ 1.32
HIF1A-206ENST00000553999 GALNT17Q6IS24 598 aa23.31■■□□□ 1.32
HIF1A-206ENST00000553999 MIER3Q7Z3K6 550 aa23.31■■□□□ 1.32
HIF1A-206ENST00000553999 METTL13Q8N6R0 699 aa23.31■■□□□ 1.32
HIF1A-206ENST00000553999 TNPO1Q92973 898 aaKnown RBP23.31■■□□□ 1.32
HIF1A-206ENST00000553999 ZNF668Q96K58 619 aaPredicted RBP23.31■■□□□ 1.32
HIF1A-206ENST00000553999 TMEM150BA6NC51 233 aa23.3■■□□□ 1.32
HIF1A-206ENST00000553999 ZBTB42B2RXF5 422 aa23.3■■□□□ 1.32
HIF1A-206ENST00000553999 EIF5BO60841 1220 aaKnown RBP23.3■■□□□ 1.32
HIF1A-206ENST00000553999 CLCN3P51790 818 aa23.3■■□□□ 1.32
HIF1A-206ENST00000553999 MKRN4PQ13434 485 aaPredicted RBP23.3■■□□□ 1.32
HIF1A-206ENST00000553999 Q4G0T1 1027 aa23.3■■□□□ 1.32
HIF1A-206ENST00000553999 WASF1Q92558 559 aa23.3■■□□□ 1.32
HIF1A-206ENST00000553999 IL17RAQ96F46 866 aa23.3■■□□□ 1.32
HIF1A-206ENST00000553999 YME1L1Q96TA2 773 aa23.3■■□□□ 1.32
HIF1A-206ENST00000553999 RAD9AQ99638 391 aa23.3■■□□□ 1.32
HIF1A-206ENST00000553999 SH2D3AQ9BRG2 576 aa23.3■■□□□ 1.32
HIF1A-206ENST00000553999 MAFBQ9Y5Q3 323 aaPredicted RBP23.3■■□□□ 1.32
HIF1A-206ENST00000553999 CDH23Q9H251 3354 aa23.3■■□□□ 1.32
HIF1A-206ENST00000553999 IGSF9BQ9UPX0 1349 aa23.3■■□□□ 1.32
HIF1A-206ENST00000553999 LINC01553A4QN01 128 aa23.29■■□□□ 1.32
HIF1A-206ENST00000553999 ZNF862O60290 1169 aa23.29■■□□□ 1.32
HIF1A-206ENST00000553999 CCNT1O60563 726 aaKnown RBP23.29■■□□□ 1.32
HIF1A-206ENST00000553999 VTNP04004 478 aa23.29■■□□□ 1.32
HIF1A-206ENST00000553999 KRT2P35908 639 aa23.29■■□□□ 1.32
HIF1A-206ENST00000553999 IER5Q5VY09 327 aa23.29■■□□□ 1.32
HIF1A-206ENST00000553999 TSHZ1Q6ZSZ6 1077 aa23.29■■□□□ 1.32
HIF1A-206ENST00000553999 NEK8Q86SG6 692 aa23.29■■□□□ 1.32
HIF1A-206ENST00000553999 RPAINQ86UA6 219 aa23.29■■□□□ 1.32
HIF1A-206ENST00000553999 RIT2Q99578 217 aa23.29■■□□□ 1.32
HIF1A-206ENST00000553999 CDHR5Q9HBB8 845 aa23.29■■□□□ 1.32
HIF1A-206ENST00000553999 CHD9Q3L8U1 2897 aa23.29■■□□□ 1.32
HIF1A-206ENST00000553999 COL4A4P53420 1690 aaPredicted RBP23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms