RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 PADI3Q9ULW8 664 aa13.2□□□□□ -0.3
PRPF40B-212ENST00000551111 TRPC6Q9Y210 931 aa13.2□□□□□ -0.3
PRPF40B-212ENST00000551111 WDFY4Q6ZS81 3184 aa13.2□□□□□ -0.3
PRPF40B-212ENST00000551111 NFASCO94856 1347 aa13.19□□□□□ -0.3
PRPF40B-212ENST00000551111 MUC6Q6W4X9 2439 aa13.19□□□□□ -0.3
PRPF40B-212ENST00000551111 GOLGA8AA7E2F4 631 aa13.19□□□□□ -0.3
PRPF40B-212ENST00000551111 GOLGA8BA8MQT2 603 aa13.19□□□□□ -0.3
PRPF40B-212ENST00000551111 C5orf67F2Z3F1 127 aa13.19□□□□□ -0.3
PRPF40B-212ENST00000551111 PI4K2BG5E9Z4 385 aa13.19□□□□□ -0.3
PRPF40B-212ENST00000551111 MAFGO15525 162 aa13.19□□□□□ -0.3
PRPF40B-212ENST00000551111 LINC01565O15544 149 aa13.19□□□□□ -0.3
PRPF40B-212ENST00000551111 DHX15O43143 795 aaKnown RBP13.19□□□□□ -0.3
PRPF40B-212ENST00000551111 MGEA5O60502 916 aa13.19□□□□□ -0.3
PRPF40B-212ENST00000551111 ATG7O95352 703 aa13.19□□□□□ -0.3
PRPF40B-212ENST00000551111 ATP4AP20648 1035 aa13.19□□□□□ -0.3
PRPF40B-212ENST00000551111 STAT5BP51692 787 aa13.19□□□□□ -0.3
PRPF40B-212ENST00000551111 ADCY7P51828 1080 aa13.19□□□□□ -0.3
PRPF40B-212ENST00000551111 APOBRQ0VD83 1088 aa13.19□□□□□ -0.3
PRPF40B-212ENST00000551111 HYAL1Q12794 435 aa13.19□□□□□ -0.3
PRPF40B-212ENST00000551111 CLUL1Q15846 466 aa13.19□□□□□ -0.3
PRPF40B-212ENST00000551111 PTPROQ16827 1216 aa13.19□□□□□ -0.3
PRPF40B-212ENST00000551111 PAN2Q504Q3 1202 aaKnown RBP13.19□□□□□ -0.3
PRPF40B-212ENST00000551111 SYNE3Q6ZMZ3 975 aa13.19□□□□□ -0.3
PRPF40B-212ENST00000551111 GJD3Q8N144 294 aa13.19□□□□□ -0.3
PRPF40B-212ENST00000551111 PABPC5Q96DU9 382 aaKnown RBP13.19□□□□□ -0.3
PRPF40B-212ENST00000551111 NSUN3Q9H649 340 aaKnown RBP13.19□□□□□ -0.3
PRPF40B-212ENST00000551111 CLDND1Q9NY35 253 aa13.19□□□□□ -0.3
PRPF40B-212ENST00000551111 BARHL2Q9NY43 387 aa13.19□□□□□ -0.3
PRPF40B-212ENST00000551111 PCDHA2Q9Y5H9 948 aa13.19□□□□□ -0.3
PRPF40B-212ENST00000551111 MRPL42Q9Y6G3 142 aaKnown RBP13.19□□□□□ -0.3
PRPF40B-212ENST00000551111 IGLV3-22A0A075B6J6 115 aa13.18□□□□□ -0.3
PRPF40B-212ENST00000551111 IGKV6D-21A0A0A0MT36 114 aa13.18□□□□□ -0.3
PRPF40B-212ENST00000551111 RRN3P2A6NIE6 340 aa13.18□□□□□ -0.3
PRPF40B-212ENST00000551111 ZBTB42B2RXF5 422 aa13.18□□□□□ -0.3
PRPF40B-212ENST00000551111 EDIL3O43854 480 aa13.18□□□□□ -0.3
PRPF40B-212ENST00000551111 IBSPP21815 317 aaPredicted RBP13.18□□□□□ -0.3
PRPF40B-212ENST00000551111 SREBF1P36956 1147 aa13.18□□□□□ -0.3
PRPF40B-212ENST00000551111 BTG3Q14201 252 aaPredicted RBP13.18□□□□□ -0.3
PRPF40B-212ENST00000551111 CTC1Q2NKJ3 1217 aa13.18□□□□□ -0.3
PRPF40B-212ENST00000551111 TSGA10IPQ3SY00 556 aa13.18□□□□□ -0.3
PRPF40B-212ENST00000551111 TIGD5Q53EQ6 642 aa13.18□□□□□ -0.3
PRPF40B-212ENST00000551111 TMEM31Q5JXX7 168 aa13.18□□□□□ -0.3
PRPF40B-212ENST00000551111 MTHFD1LQ6UB35 978 aa13.18□□□□□ -0.3
PRPF40B-212ENST00000551111 ABHD15Q6UXT9 468 aa13.18□□□□□ -0.3
PRPF40B-212ENST00000551111 PLPPR4Q7Z2D5 763 aa13.18□□□□□ -0.3
PRPF40B-212ENST00000551111 TRMT1LQ7Z2T5 733 aaKnown RBP13.18□□□□□ -0.3
PRPF40B-212ENST00000551111 RSPH3Q86UC2 560 aa13.18□□□□□ -0.3
PRPF40B-212ENST00000551111 CCDC60Q8IWA6 550 aaPredicted RBP13.18□□□□□ -0.3
PRPF40B-212ENST00000551111 TMEM40Q8WWA1 233 aa13.18□□□□□ -0.3
PRPF40B-212ENST00000551111 CRYGNQ8WXF5 182 aa13.18□□□□□ -0.3
PRPF40B-212ENST00000551111 PPP1R16BQ96T49 567 aa13.18□□□□□ -0.3
PRPF40B-212ENST00000551111 SDF4Q9BRK5 362 aa13.18□□□□□ -0.3
PRPF40B-212ENST00000551111 CELF4Q9BZC1 486 aaKnown RBP13.18□□□□□ -0.3
PRPF40B-212ENST00000551111 RBM28Q9NW13 759 aaKnown RBP13.18□□□□□ -0.3
PRPF40B-212ENST00000551111 HCSTQ9UBK5 93 aa13.18□□□□□ -0.3
PRPF40B-212ENST00000551111 PCDHGC5Q9Y5F6 944 aa13.18□□□□□ -0.3
PRPF40B-212ENST00000551111 TRPV2Q9Y5S1 764 aa13.18□□□□□ -0.3
PRPF40B-212ENST00000551111 IGSF9BQ9UPX0 1349 aa13.17□□□□□ -0.3
PRPF40B-212ENST00000551111 GPR37L1O60883 481 aa13.17□□□□□ -0.3
PRPF40B-212ENST00000551111 KLRC1P26715 233 aa13.17□□□□□ -0.3
PRPF40B-212ENST00000551111 IRS1P35568 1242 aa13.17□□□□□ -0.3
PRPF40B-212ENST00000551111 PLA2G5P39877 138 aa13.17□□□□□ -0.3
PRPF40B-212ENST00000551111 PKN1Q16512 942 aa13.17□□□□□ -0.3
PRPF40B-212ENST00000551111 RNF20Q5VTR2 975 aa13.17□□□□□ -0.3
PRPF40B-212ENST00000551111 ADGRD2Q7Z7M1 963 aa13.17□□□□□ -0.3
PRPF40B-212ENST00000551111 KIAA0319LQ8IZA0 1049 aa13.17□□□□□ -0.3
PRPF40B-212ENST00000551111 RASGRP4Q8TDF6 673 aa13.17□□□□□ -0.3
PRPF40B-212ENST00000551111 IGFLR1Q9H665 355 aa13.17□□□□□ -0.3
PRPF40B-212ENST00000551111 AZI2Q9H6S1 392 aa13.17□□□□□ -0.3
PRPF40B-212ENST00000551111 NAP1L2Q9ULW6 460 aaPredicted RBP13.17□□□□□ -0.3
PRPF40B-212ENST00000551111 PLAGL2Q9UPG8 496 aa13.17□□□□□ -0.3
PRPF40B-212ENST00000551111 GINS2Q9Y248 185 aa13.17□□□□□ -0.3
PRPF40B-212ENST00000551111 NOC2LQ9Y3T9 749 aaKnown RBP13.17□□□□□ -0.3
PRPF40B-212ENST00000551111 MYO10Q9HD67 2058 aa13.16□□□□□ -0.3
PRPF40B-212ENST00000551111 TECTAO75443 2155 aa13.16□□□□□ -0.3
PRPF40B-212ENST00000551111 SMIM35A0A1B0GVV1 85 aa13.16□□□□□ -0.3
PRPF40B-212ENST00000551111 TBX10O75333 385 aa13.16□□□□□ -0.3
PRPF40B-212ENST00000551111 FOSP01100 380 aaPredicted RBP13.16□□□□□ -0.3
PRPF40B-212ENST00000551111 ITGB1P05556 798 aa13.16□□□□□ -0.3
PRPF40B-212ENST00000551111 RB1P06400 928 aa13.16□□□□□ -0.3
PRPF40B-212ENST00000551111 SSTR3P32745 418 aaPredicted RBP13.16□□□□□ -0.3
PRPF40B-212ENST00000551111 ZNF76P36508 570 aa13.16□□□□□ -0.3
PRPF40B-212ENST00000551111 PFKFB3Q16875 520 aaPredicted RBP13.16□□□□□ -0.3
PRPF40B-212ENST00000551111 IER5Q5VY09 327 aa13.16□□□□□ -0.3
PRPF40B-212ENST00000551111 SWSAP1Q6NVH7 229 aa13.16□□□□□ -0.3
PRPF40B-212ENST00000551111 PPP1R18Q6NYC8 613 aa13.16□□□□□ -0.3
PRPF40B-212ENST00000551111 Q6ZUG5 572 aa13.16□□□□□ -0.3
PRPF40B-212ENST00000551111 PLA2G4DQ86XP0 818 aa13.16□□□□□ -0.3
PRPF40B-212ENST00000551111 SPPL3Q8TCT6 385 aa13.16□□□□□ -0.3
PRPF40B-212ENST00000551111 C11orf84Q9BUA3 381 aaPredicted RBP13.16□□□□□ -0.3
PRPF40B-212ENST00000551111 ERVK-5Q9HDB9 667 aa13.16□□□□□ -0.3
PRPF40B-212ENST00000551111 ZNF318Q5VUA4 2279 aa13.16□□□□□ -0.3
PRPF40B-212ENST00000551111 SCG2P13521 617 aa13.15□□□□□ -0.3
PRPF40B-212ENST00000551111 KRT76Q01546 638 aa13.15□□□□□ -0.3
PRPF40B-212ENST00000551111 ZP2Q05996 745 aa13.15□□□□□ -0.3
PRPF40B-212ENST00000551111 NFX1Q12986 1120 aaKnown RBP13.15□□□□□ -0.3
PRPF40B-212ENST00000551111 PAK2Q13177 524 aa13.15□□□□□ -0.3
PRPF40B-212ENST00000551111 FAM102BQ5T8I3 360 aa13.15□□□□□ -0.3
PRPF40B-212ENST00000551111 KLHL23Q8NBE8 558 aa13.15□□□□□ -0.3
PRPF40B-212ENST00000551111 KCNB2Q92953 911 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms