RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 NPR3P17342 541 aa2.89□□□□□ -1.95
TRAV1-1-201ENST00000542354 ATF7P17544 494 aaPredicted RBP2.89□□□□□ -1.95
TRAV1-1-201ENST00000542354 NCLP19338 710 aaKnown RBP2.89□□□□□ -1.95
TRAV1-1-201ENST00000542354 GRNP28799 593 aaKnown RBP2.89□□□□□ -1.95
TRAV1-1-201ENST00000542354 ZAP70P43403 619 aa2.89□□□□□ -1.95
TRAV1-1-201ENST00000542354 PREPP48147 710 aa2.89□□□□□ -1.95
TRAV1-1-201ENST00000542354 NDUFV1P49821 464 aa2.89□□□□□ -1.95
TRAV1-1-201ENST00000542354 ACLYP53396 1101 aa2.89□□□□□ -1.95
TRAV1-1-201ENST00000542354 RRP1P56182 461 aaKnown RBP2.89□□□□□ -1.95
TRAV1-1-201ENST00000542354 IKBKEQ14164 716 aa2.89□□□□□ -1.95
TRAV1-1-201ENST00000542354 CSRP2Q16527 193 aa2.89□□□□□ -1.95
TRAV1-1-201ENST00000542354 ZNF528Q3MIS6 628 aa2.89□□□□□ -1.95
TRAV1-1-201ENST00000542354 CRTC2Q53ET0 693 aaPredicted RBP2.89□□□□□ -1.95
TRAV1-1-201ENST00000542354 SNRNP48Q6IEG0 339 aaKnown RBP2.89□□□□□ -1.95
TRAV1-1-201ENST00000542354 TXNDC11Q6PKC3 985 aa2.89□□□□□ -1.95
TRAV1-1-201ENST00000542354 ZNF438Q7Z4V0 828 aa2.89□□□□□ -1.95
TRAV1-1-201ENST00000542354 GPR142Q7Z601 462 aa2.89□□□□□ -1.95
TRAV1-1-201ENST00000542354 NGEFQ8N5V2 710 aa2.89□□□□□ -1.95
TRAV1-1-201ENST00000542354 FAM181AQ8N9Y4 354 aa2.89□□□□□ -1.95
TRAV1-1-201ENST00000542354 SMRP1Q8NCR6 262 aa2.89□□□□□ -1.95
TRAV1-1-201ENST00000542354 SMG8Q8ND04 991 aaKnown RBP2.89□□□□□ -1.95
TRAV1-1-201ENST00000542354 GLT1D1Q96MS3 346 aa2.89□□□□□ -1.95
TRAV1-1-201ENST00000542354 TBC1D32Q96NH3 1257 aa2.89□□□□□ -1.95
TRAV1-1-201ENST00000542354 EPC1Q9H2F5 836 aa2.89□□□□□ -1.95
TRAV1-1-201ENST00000542354 RASSF4Q9H2L5 321 aa2.89□□□□□ -1.95
TRAV1-1-201ENST00000542354 TDRD3Q9H7E2 651 aaKnown RBP2.89□□□□□ -1.95
TRAV1-1-201ENST00000542354 INCENPQ9NQS7 918 aa2.89□□□□□ -1.95
TRAV1-1-201ENST00000542354 PICK1Q9NRD5 415 aa2.89□□□□□ -1.95
TRAV1-1-201ENST00000542354 SEMA4GQ9NTN9 838 aa2.89□□□□□ -1.95
TRAV1-1-201ENST00000542354 FAM53CQ9NYF3 392 aa2.89□□□□□ -1.95
TRAV1-1-201ENST00000542354 FLRT1Q9NZU1 646 aa2.89□□□□□ -1.95
TRAV1-1-201ENST00000542354 SLC5A6Q9Y289 635 aa2.89□□□□□ -1.95
TRAV1-1-201ENST00000542354 PCDHAC2Q9Y5I4 1007 aa2.89□□□□□ -1.95
TRAV1-1-201ENST00000542354 MYO7AQ13402 2215 aa2.89□□□□□ -1.95
TRAV1-1-201ENST00000542354 ITPR2Q14571 2701 aa2.89□□□□□ -1.95
TRAV1-1-201ENST00000542354 XDHP47989 1333 aa2.89□□□□□ -1.95
TRAV1-1-201ENST00000542354 COL6A6A6NMZ7 2263 aa2.89□□□□□ -1.95
TRAV1-1-201ENST00000542354 URB1O60287 2271 aaKnown RBP2.89□□□□□ -1.95
TRAV1-1-201ENST00000542354 DNHD1Q96M86 4753 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 FANCMQ8IYD8 2048 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 ARID1BQ8NFD5 2236 aaPredicted RBP2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 FLNCQ14315 2725 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 MYO10Q9HD67 2058 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 AHCTF1Q8WYP5 2266 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 ATRQ13535 2644 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 LINC01553A4QN01 128 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 F8W031 263 aaPredicted RBP2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 PYCARD-AS1I3L0S3 204 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 ARVCFO00192 962 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 PDE2AO00408 941 aaPredicted RBP2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 TBX10O75333 385 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 LUC7L3O95232 432 aaKnown RBP2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 TOP3BO95985 862 aaKnown RBP2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 SNRPA1P09661 255 aaKnown RBP2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 EDN3P14138 238 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 EPHA1P21709 976 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 CES1P23141 567 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 CDC25BP30305 580 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 KCNJ6P48051 423 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 NLRP12P59046 1061 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 ATP11AP98196 1134 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 EHHADHQ08426 723 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 ZNF252P-AS1Q0IIN9 211 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 TEFQ10587 303 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 HYAL1Q12794 435 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 COASYQ13057 564 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 ADAM15Q13444 863 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 GPM6BQ13491 265 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 EIF4A2Q14240 407 aaKnown RBP2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 PLCL1Q15111 1095 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 MSMPQ1L6U9 139 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 CYP27C1Q4G0S4 372 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 FAM47AQ5JRC9 791 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 COX20Q5RI15 118 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 EXOSC6Q5RKV6 272 aaKnown RBP2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 NOL9Q5SY16 702 aaKnown RBP2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 ALKBH2Q6NS38 261 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 CBLL1Q75N03 491 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 MIGA2Q7L4E1 593 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 FAM126BQ8IXS8 530 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 ZSCAN18Q8TBC5 510 aaPredicted RBP2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 UBASH3BQ8TF42 649 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 FOXD4L4Q8WXT5 416 aaPredicted RBP2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 SLC7A3Q8WY07 619 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 BSNDQ8WZ55 320 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 POM121Q96HA1 1249 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 MSLNLQ96KJ4 702 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 SAMD11Q96NU1 681 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 PPP1R16BQ96T49 567 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 RAD9AQ99638 391 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 USP26Q9BXU7 913 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 BCAS3Q9H6U6 928 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 STIM2Q9P246 746 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 IL17BQ9UHF5 180 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 ZNF112Q9UJU3 913 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 NR2E1Q9Y466 385 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 USP15Q9Y4E8 981 aaPredicted RBP2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 AFG3L2Q9Y4W6 797 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 KIF16BQ96L93 1317 aa2.88□□□□□ -1.95
TRAV1-1-201ENST00000542354 NOTCH1P46531 2555 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms