RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 NCAPHQ15003 741 aa1.58□□□□□ -2.16
COPB1-212ENST00000534771 SF1Q15637 639 aaKnown RBP1.58□□□□□ -2.16
COPB1-212ENST00000534771 TBR1Q16650 682 aa1.58□□□□□ -2.16
COPB1-212ENST00000534771 PRSS53Q2L4Q9 553 aa1.58□□□□□ -2.16
COPB1-212ENST00000534771 LDLRAD1Q5T700 205 aa1.58□□□□□ -2.16
COPB1-212ENST00000534771 CD276Q5ZPR3 534 aa1.58□□□□□ -2.16
COPB1-212ENST00000534771 SPTY2D1Q68D10 685 aaPredicted RBP1.58□□□□□ -2.16
COPB1-212ENST00000534771 Q6ZPA2 131 aa1.58□□□□□ -2.16
COPB1-212ENST00000534771 ERICH6Q7L0X2 663 aa1.58□□□□□ -2.16
COPB1-212ENST00000534771 OTOP3Q7RTS5 596 aa1.58□□□□□ -2.16
COPB1-212ENST00000534771 PNPLA5Q7Z6Z6 429 aaPredicted RBP1.58□□□□□ -2.16
COPB1-212ENST00000534771 PPIL6Q8IXY8 311 aa1.58□□□□□ -2.16
COPB1-212ENST00000534771 RPUSD2Q8IZ73 545 aaKnown RBP1.58□□□□□ -2.16
COPB1-212ENST00000534771 CPLX3Q8WVH0 158 aa1.58□□□□□ -2.16
COPB1-212ENST00000534771 HAS1Q92839 578 aa1.58□□□□□ -2.16
COPB1-212ENST00000534771 LGR4Q9BXB1 951 aa1.58□□□□□ -2.16
COPB1-212ENST00000534771 BCL2L13Q9BXK5 485 aa1.58□□□□□ -2.16
COPB1-212ENST00000534771 RIOX1Q9H6W3 641 aa1.58□□□□□ -2.16
COPB1-212ENST00000534771 METTL5Q9NRN9 209 aaKnown RBP1.58□□□□□ -2.16
COPB1-212ENST00000534771 ZNHIT2Q9UHR6 403 aa1.58□□□□□ -2.16
COPB1-212ENST00000534771 DDX41Q9UJV9 622 aaKnown RBP1.58□□□□□ -2.16
COPB1-212ENST00000534771 PCDHGB7Q9Y5F8 929 aa1.58□□□□□ -2.16
COPB1-212ENST00000534771 NPFFR2Q9Y5X5 522 aa1.58□□□□□ -2.16
COPB1-212ENST00000534771 ZNF839A8K0R7 811 aa1.57□□□□□ -2.16
COPB1-212ENST00000534771 CAPN14A8MX76 684 aa1.57□□□□□ -2.16
COPB1-212ENST00000534771 TBX1O43435 398 aa1.57□□□□□ -2.16
COPB1-212ENST00000534771 RPS6KA4O75676 772 aa1.57□□□□□ -2.16
COPB1-212ENST00000534771 HMGCRP04035 888 aa1.57□□□□□ -2.16
COPB1-212ENST00000534771 COL6A2P12110 1019 aa1.57□□□□□ -2.16
COPB1-212ENST00000534771 PDE6AP16499 860 aa1.57□□□□□ -2.16
COPB1-212ENST00000534771 PTGS2P35354 604 aa1.57□□□□□ -2.16
COPB1-212ENST00000534771 KCNQ1P51787 676 aa1.57□□□□□ -2.16
COPB1-212ENST00000534771 EPHA5P54756 1037 aa1.57□□□□□ -2.16
COPB1-212ENST00000534771 DBPQ10586 325 aaPredicted RBP1.57□□□□□ -2.16
COPB1-212ENST00000534771 PAK2Q13177 524 aa1.57□□□□□ -2.16
COPB1-212ENST00000534771 CRHR2Q13324 411 aa1.57□□□□□ -2.16
COPB1-212ENST00000534771 RRP1BQ14684 758 aaKnown RBP1.57□□□□□ -2.16
COPB1-212ENST00000534771 WDR72Q3MJ13 1102 aa1.57□□□□□ -2.16
COPB1-212ENST00000534771 DENND5AQ6IQ26 1287 aa1.57□□□□□ -2.16
COPB1-212ENST00000534771 CRELD2Q6UXH1 353 aaPredicted RBP1.57□□□□□ -2.16
COPB1-212ENST00000534771 ZNF662Q6ZS27 426 aa1.57□□□□□ -2.16
COPB1-212ENST00000534771 CXXC5Q7LFL8 322 aaKnown RBP1.57□□□□□ -2.16
COPB1-212ENST00000534771 GSPT2Q8IYD1 628 aaKnown RBP1.57□□□□□ -2.16
COPB1-212ENST00000534771 ZNF654Q8IZM8 581 aa1.57□□□□□ -2.16
COPB1-212ENST00000534771 D2HGDHQ8N465 521 aa1.57□□□□□ -2.16
COPB1-212ENST00000534771 TMEM145Q8NBT3 493 aa1.57□□□□□ -2.16
COPB1-212ENST00000534771 UHMK1Q8TAS1 419 aaKnown RBP1.57□□□□□ -2.16
COPB1-212ENST00000534771 GIPC2Q8TF65 315 aa1.57□□□□□ -2.16
COPB1-212ENST00000534771 TMEM176AQ96HP8 235 aa1.57□□□□□ -2.16
COPB1-212ENST00000534771 SHDQ96IW2 340 aa1.57□□□□□ -2.16
COPB1-212ENST00000534771 MPHOSPH9Q99550 1183 aa1.57□□□□□ -2.16
COPB1-212ENST00000534771 ADGRE3Q9BY15 652 aa1.57□□□□□ -2.16
COPB1-212ENST00000534771 BACH2Q9BYV9 841 aa1.57□□□□□ -2.16
COPB1-212ENST00000534771 ZDHHC5Q9C0B5 715 aa1.57□□□□□ -2.16
COPB1-212ENST00000534771 SLC39A2Q9NP94 309 aa1.57□□□□□ -2.16
COPB1-212ENST00000534771 GPR27Q9NS67 375 aa1.57□□□□□ -2.16
COPB1-212ENST00000534771 RNF7Q9UBF6 113 aa1.57□□□□□ -2.16
COPB1-212ENST00000534771 FBXO10Q9UK96 956 aa1.57□□□□□ -2.16
COPB1-212ENST00000534771 PACSIN3Q9UKS6 424 aa1.57□□□□□ -2.16
COPB1-212ENST00000534771 DSEQ9UL01 958 aa1.57□□□□□ -2.16
COPB1-212ENST00000534771 PMS2P1A4D2B8 440 aa1.56□□□□□ -2.16
COPB1-212ENST00000534771 ZAR1LA6NP61 321 aa1.56□□□□□ -2.16
COPB1-212ENST00000534771 ACOT7O00154 380 aa1.56□□□□□ -2.16
COPB1-212ENST00000534771 NKRFO15226 690 aaKnown RBP eCLIP1.56□□□□□ -2.16
COPB1-212ENST00000534771 MSCO60682 206 aa1.56□□□□□ -2.16
COPB1-212ENST00000534771 LMNAP02545 664 aaKnown RBP1.56□□□□□ -2.16
COPB1-212ENST00000534771 GNAT1P11488 350 aa1.56□□□□□ -2.16
COPB1-212ENST00000534771 PROZP22891 400 aa1.56□□□□□ -2.16
COPB1-212ENST00000534771 ETV4P43268 484 aa1.56□□□□□ -2.16
COPB1-212ENST00000534771 MEOX1P50221 254 aa1.56□□□□□ -2.16
COPB1-212ENST00000534771 GFRA1P56159 465 aa1.56□□□□□ -2.16
COPB1-212ENST00000534771 FANCCQ00597 558 aa1.56□□□□□ -2.16
COPB1-212ENST00000534771 CNGB1Q14028 1251 aaPredicted RBP1.56□□□□□ -2.16
COPB1-212ENST00000534771 PCOLCEQ15113 449 aa1.56□□□□□ -2.16
COPB1-212ENST00000534771 CCDC27Q2M243 656 aa1.56□□□□□ -2.16
COPB1-212ENST00000534771 STRIP1Q5VSL9 837 aa1.56□□□□□ -2.16
COPB1-212ENST00000534771 MBNL2Q5VZF2 373 aaKnown RBP1.56□□□□□ -2.16
COPB1-212ENST00000534771 TRIM68Q6AZZ1 485 aa1.56□□□□□ -2.16
COPB1-212ENST00000534771 RSPO2Q6UXX9 243 aaPredicted RBP1.56□□□□□ -2.16
COPB1-212ENST00000534771 KCTD1Q719H9 257 aa1.56□□□□□ -2.16
COPB1-212ENST00000534771 LARP4Q71RC2 724 aaKnown RBP eCLIP1.56□□□□□ -2.16
COPB1-212ENST00000534771 MRGPREQ86SM8 312 aa1.56□□□□□ -2.16
COPB1-212ENST00000534771 ZNF227Q86WZ6 799 aa1.56□□□□□ -2.16
COPB1-212ENST00000534771 GPR135Q8IZ08 494 aa1.56□□□□□ -2.16
COPB1-212ENST00000534771 NLGN4XQ8N0W4 816 aa1.56□□□□□ -2.16
COPB1-212ENST00000534771 ANKRD35Q8N283 1001 aa1.56□□□□□ -2.16
COPB1-212ENST00000534771 RASGRP4Q8TDF6 673 aa1.56□□□□□ -2.16
COPB1-212ENST00000534771 CFHR4Q92496 578 aa1.56□□□□□ -2.16
COPB1-212ENST00000534771 KCNJ15Q99712 375 aa1.56□□□□□ -2.16
COPB1-212ENST00000534771 OR10A2Q9H208 303 aa1.56□□□□□ -2.16
COPB1-212ENST00000534771 NRDE2Q9H7Z3 1164 aa1.56□□□□□ -2.16
COPB1-212ENST00000534771 GPRC5BQ9NZH0 403 aa1.56□□□□□ -2.16
COPB1-212ENST00000534771 ARHGAP28Q9P2N2 729 aa1.56□□□□□ -2.16
COPB1-212ENST00000534771 HECAQ9UBI9 543 aaPredicted RBP1.56□□□□□ -2.16
COPB1-212ENST00000534771 CDC42EP3Q9UKI2 254 aa1.56□□□□□ -2.16
COPB1-212ENST00000534771 TELO2Q9Y4R8 837 aa1.56□□□□□ -2.16
COPB1-212ENST00000534771 XDHP47989 1333 aa1.56□□□□□ -2.16
COPB1-212ENST00000534771 A0A0G2JNJ9 132 aa1.55□□□□□ -2.16
COPB1-212ENST00000534771 SLC26A4O43511 780 aa1.55□□□□□ -2.16
COPB1-212ENST00000534771 GJA4P35212 333 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms