RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 CWC27Q6UX04 472 aaKnown RBP14.29□□□□□ -0.12
CAPN1-223ENST00000533079 ZBTB33Q86T24 672 aa14.29□□□□□ -0.12
CAPN1-223ENST00000533079 EXOC6Q8TAG9 804 aa14.29□□□□□ -0.12
CAPN1-223ENST00000533079 MICAL1Q8TDZ2 1067 aa14.29□□□□□ -0.12
CAPN1-223ENST00000533079 GLG1Q92896 1179 aa14.29□□□□□ -0.12
CAPN1-223ENST00000533079 LZTS1Q9Y250 596 aa14.29□□□□□ -0.12
CAPN1-223ENST00000533079 ERICH2A1L162 156 aa14.28□□□□□ -0.12
CAPN1-223ENST00000533079 PRR23AA6NEV1 266 aa14.28□□□□□ -0.12
CAPN1-223ENST00000533079 H0Y858 1186 aa14.28□□□□□ -0.12
CAPN1-223ENST00000533079 MAFGO15525 162 aa14.28□□□□□ -0.12
CAPN1-223ENST00000533079 FGF18O76093 207 aa14.28□□□□□ -0.12
CAPN1-223ENST00000533079 MARK3P27448 753 aa14.28□□□□□ -0.12
CAPN1-223ENST00000533079 TRDNQ13061 729 aa14.28□□□□□ -0.12
CAPN1-223ENST00000533079 KCNC3Q14003 757 aa14.28□□□□□ -0.12
CAPN1-223ENST00000533079 SLC35G1Q2M3R5 365 aa14.28□□□□□ -0.12
CAPN1-223ENST00000533079 ODR4Q5SWX8 454 aa14.28□□□□□ -0.12
CAPN1-223ENST00000533079 RTN4RL1Q86UN2 441 aaPredicted RBP14.28□□□□□ -0.12
CAPN1-223ENST00000533079 NME8Q8N427 588 aa14.28□□□□□ -0.12
CAPN1-223ENST00000533079 VN1R2Q8NFZ6 395 aa14.28□□□□□ -0.12
CAPN1-223ENST00000533079 KAT6AQ92794 2004 aa14.28□□□□□ -0.12
CAPN1-223ENST00000533079 OSBPL3Q9H4L5 887 aa14.28□□□□□ -0.12
CAPN1-223ENST00000533079 C1orf112Q9NSG2 853 aa14.28□□□□□ -0.12
CAPN1-223ENST00000533079 SORCS3Q9UPU3 1222 aa14.28□□□□□ -0.12
CAPN1-223ENST00000533079 TELO2Q9Y4R8 837 aa14.28□□□□□ -0.12
CAPN1-223ENST00000533079 GSTTP1A0A1W2PQM5 241 aa14.27□□□□□ -0.13
CAPN1-223ENST00000533079 FSCN2O14926 492 aa14.27□□□□□ -0.13
CAPN1-223ENST00000533079 TROAPQ12815 778 aa14.27□□□□□ -0.13
CAPN1-223ENST00000533079 MTMR1Q13613 665 aa14.27□□□□□ -0.13
CAPN1-223ENST00000533079 SART3Q15020 963 aaKnown RBP14.27□□□□□ -0.13
CAPN1-223ENST00000533079 SPOUT1Q5T280 376 aaKnown RBP14.27□□□□□ -0.13
CAPN1-223ENST00000533079 ANKRD54Q6NXT1 300 aa14.27□□□□□ -0.13
CAPN1-223ENST00000533079 CCDC136Q96JN2 1154 aa14.27□□□□□ -0.13
CAPN1-223ENST00000533079 NECTIN4Q96NY8 510 aa14.27□□□□□ -0.13
CAPN1-223ENST00000533079 CELF4Q9BZC1 486 aaKnown RBP14.27□□□□□ -0.13
CAPN1-223ENST00000533079 FAM49AQ9H0Q0 323 aaPredicted RBP14.27□□□□□ -0.13
CAPN1-223ENST00000533079 S1PR5Q9H228 398 aa14.27□□□□□ -0.13
CAPN1-223ENST00000533079 AZI2Q9H6S1 392 aa14.27□□□□□ -0.13
CAPN1-223ENST00000533079 PCDHB7Q9Y5E2 793 aa14.27□□□□□ -0.13
CAPN1-223ENST00000533079 PCDHGC5Q9Y5F6 944 aa14.27□□□□□ -0.13
CAPN1-223ENST00000533079 PCDHA2Q9Y5H9 948 aa14.27□□□□□ -0.13
CAPN1-223ENST00000533079 DCHS1Q96JQ0 3298 aa14.27□□□□□ -0.13
CAPN1-223ENST00000533079 SMIM35A0A1B0GVV1 85 aa14.26□□□□□ -0.13
CAPN1-223ENST00000533079 MEIS2O14770 477 aa14.26□□□□□ -0.13
CAPN1-223ENST00000533079 PER2O15055 1255 aa14.26□□□□□ -0.13
CAPN1-223ENST00000533079 INSRRP14616 1297 aa14.26□□□□□ -0.13
CAPN1-223ENST00000533079 LAG3P18627 525 aa14.26□□□□□ -0.13
CAPN1-223ENST00000533079 IGBP1P78318 339 aa14.26□□□□□ -0.13
CAPN1-223ENST00000533079 PLCB3Q01970 1234 aa14.26□□□□□ -0.13
CAPN1-223ENST00000533079 CYB5R4Q7L1T6 521 aa14.26□□□□□ -0.13
CAPN1-223ENST00000533079 ASCL5Q7RTU5 278 aa14.26□□□□□ -0.13
CAPN1-223ENST00000533079 THNSL1Q8IYQ7 743 aa14.26□□□□□ -0.13
CAPN1-223ENST00000533079 MAP3K14Q99558 947 aa14.26□□□□□ -0.13
CAPN1-223ENST00000533079 SPZ1Q9BXG8 430 aa14.26□□□□□ -0.13
CAPN1-223ENST00000533079 JPH1Q9HDC5 661 aaPredicted RBP14.26□□□□□ -0.13
CAPN1-223ENST00000533079 NGRNQ9NPE2 291 aaKnown RBP14.26□□□□□ -0.13
CAPN1-223ENST00000533079 SEC63Q9UGP8 760 aaKnown RBP14.26□□□□□ -0.13
CAPN1-223ENST00000533079 TRPC6Q9Y210 931 aa14.26□□□□□ -0.13
CAPN1-223ENST00000533079 FNDC1Q4ZHG4 1894 aaPredicted RBP14.26□□□□□ -0.13
CAPN1-223ENST00000533079 MYO7AQ13402 2215 aa14.26□□□□□ -0.13
CAPN1-223ENST00000533079 ATP9AO75110 1047 aa14.25□□□□□ -0.13
CAPN1-223ENST00000533079 PPFIA3O75145 1194 aa14.25□□□□□ -0.13
CAPN1-223ENST00000533079 ITGB5P18084 799 aa14.25□□□□□ -0.13
CAPN1-223ENST00000533079 SMARCA1P28370 1054 aa14.25□□□□□ -0.13
CAPN1-223ENST00000533079 PPM1AP35813 382 aa14.25□□□□□ -0.13
CAPN1-223ENST00000533079 TECP42680 631 aa14.25□□□□□ -0.13
CAPN1-223ENST00000533079 SLC26A2P50443 739 aa14.25□□□□□ -0.13
CAPN1-223ENST00000533079 KRT76Q01546 638 aa14.25□□□□□ -0.13
CAPN1-223ENST00000533079 WTAPQ15007 396 aa14.25□□□□□ -0.13
CAPN1-223ENST00000533079 TPRNQ4KMQ1 711 aa14.25□□□□□ -0.13
CAPN1-223ENST00000533079 B4GALNT3Q6L9W6 998 aa14.25□□□□□ -0.13
CAPN1-223ENST00000533079 USP17L6PQ6QN14 398 aa14.25□□□□□ -0.13
CAPN1-223ENST00000533079 COLGALT1Q8NBJ5 622 aa14.25□□□□□ -0.13
CAPN1-223ENST00000533079 KREMEN2Q8NCW0 462 aa14.25□□□□□ -0.13
CAPN1-223ENST00000533079 CASP10Q92851 521 aa14.25□□□□□ -0.13
CAPN1-223ENST00000533079 RRP36Q96EU6 259 aaKnown RBP14.25□□□□□ -0.13
CAPN1-223ENST00000533079 LNPKQ9C0E8 428 aa14.25□□□□□ -0.13
CAPN1-223ENST00000533079 TMX1Q9H3N1 280 aa14.25□□□□□ -0.13
CAPN1-223ENST00000533079 RGS18Q9NS28 235 aa14.25□□□□□ -0.13
CAPN1-223ENST00000533079 TMEM260Q9NX78 707 aa14.25□□□□□ -0.13
CAPN1-223ENST00000533079 PUF60Q9UHX1 559 aaKnown RBP14.25□□□□□ -0.13
CAPN1-223ENST00000533079 VPS13AQ96RL7 3174 aa14.25□□□□□ -0.13
CAPN1-223ENST00000533079 DENND3A2RUS2 1198 aa14.24□□□□□ -0.13
CAPN1-223ENST00000533079 TBKBP1A7MCY6 615 aa14.24□□□□□ -0.13
CAPN1-223ENST00000533079 IFIT3O14879 490 aaKnown RBP14.24□□□□□ -0.13
CAPN1-223ENST00000533079 GATMP50440 423 aa14.24□□□□□ -0.13
CAPN1-223ENST00000533079 ERVFC1P60507 584 aa14.24□□□□□ -0.13
CAPN1-223ENST00000533079 RBM10P98175 930 aaKnown RBP14.24□□□□□ -0.13
CAPN1-223ENST00000533079 ITIH3Q06033 890 aa14.24□□□□□ -0.13
CAPN1-223ENST00000533079 SLC24A5Q71RS6 500 aa14.24□□□□□ -0.13
CAPN1-223ENST00000533079 PLPPR4Q7Z2D5 763 aa14.24□□□□□ -0.13
CAPN1-223ENST00000533079 CATIPQ7Z7H3 387 aa14.24□□□□□ -0.13
CAPN1-223ENST00000533079 MRPS27Q92552 414 aaKnown RBP14.24□□□□□ -0.13
CAPN1-223ENST00000533079 TCF25Q9BQ70 676 aa14.24□□□□□ -0.13
CAPN1-223ENST00000533079 ELAC1Q9H777 363 aaKnown RBP14.24□□□□□ -0.13
CAPN1-223ENST00000533079 ENTPD7Q9NQZ7 604 aa14.24□□□□□ -0.13
CAPN1-223ENST00000533079 UBIAD1Q9Y5Z9 338 aa14.24□□□□□ -0.13
CAPN1-223ENST00000533079 ZDBF2Q9HCK1 2354 aa14.24□□□□□ -0.13
CAPN1-223ENST00000533079 ZFHX2Q9C0A1 2572 aaPredicted RBP14.24□□□□□ -0.13
CAPN1-223ENST00000533079 LOXHD1Q8IVV2 1947 aa14.23□□□□□ -0.13
CAPN1-223ENST00000533079 NFASCO94856 1347 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms