RNA–Protein interactions for RNA: ENST00000524115.2

NKX6-3-202, Transcript of NK6 homeobox 3, humanhuman

TSL 2 BASIC

Gene NKX6-3, Length 1,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-202ENST00000524115 ARHGAP4P98171 946 aa24.78■■□□□ 1.56
NKX6-3-202ENST00000524115 ITIH3Q06033 890 aa24.78■■□□□ 1.56
NKX6-3-202ENST00000524115 TAF3Q5VWG9 929 aa24.78■■□□□ 1.56
NKX6-3-202ENST00000524115 PDXDC1Q6P996 788 aa24.78■■□□□ 1.56
NKX6-3-202ENST00000524115 CRYGNQ8WXF5 182 aa24.78■■□□□ 1.56
NKX6-3-202ENST00000524115 IFIH1Q9BYX4 1025 aaKnown RBP24.78■■□□□ 1.56
NKX6-3-202ENST00000524115 PCDHA13Q9Y5I0 950 aa24.78■■□□□ 1.56
NKX6-3-202ENST00000524115 CCL15-CCL14A0A0B4J2E2 113 aa24.77■■□□□ 1.56
NKX6-3-202ENST00000524115 PHF20L1A8MW92 1017 aa24.77■■□□□ 1.56
NKX6-3-202ENST00000524115 IRF6O14896 467 aa24.77■■□□□ 1.56
NKX6-3-202ENST00000524115 PJA2O43164 708 aa24.77■■□□□ 1.56
NKX6-3-202ENST00000524115 AKR1B10O60218 316 aa24.77■■□□□ 1.56
NKX6-3-202ENST00000524115 KRT18P05783 430 aaKnown RBP24.77■■□□□ 1.56
NKX6-3-202ENST00000524115 SLURP2P0DP57 97 aa24.77■■□□□ 1.56
NKX6-3-202ENST00000524115 CIITAP33076 1130 aa24.77■■□□□ 1.56
NKX6-3-202ENST00000524115 KIF11P52732 1056 aa24.77■■□□□ 1.56
NKX6-3-202ENST00000524115 PPIL2Q13356 520 aa24.77■■□□□ 1.56
NKX6-3-202ENST00000524115 CCL15Q16663 113 aa24.77■■□□□ 1.56
NKX6-3-202ENST00000524115 SYDE2Q5VT97 1194 aa24.77■■□□□ 1.56
NKX6-3-202ENST00000524115 TANGO6Q9C0B7 1094 aa24.77■■□□□ 1.56
NKX6-3-202ENST00000524115 TRIM10Q9UDY6 481 aa24.77■■□□□ 1.56
NKX6-3-202ENST00000524115 F5H6K3 240 aa24.76■■□□□ 1.55
NKX6-3-202ENST00000524115 MEIS2O14770 477 aa24.76■■□□□ 1.55
NKX6-3-202ENST00000524115 SASH3O75995 380 aa24.76■■□□□ 1.55
NKX6-3-202ENST00000524115 SSBP05455 408 aaKnown RBP eCLIP24.76■■□□□ 1.55
NKX6-3-202ENST00000524115 SREBF1P36956 1147 aa24.76■■□□□ 1.55
NKX6-3-202ENST00000524115 USP14P54578 494 aa24.76■■□□□ 1.55
NKX6-3-202ENST00000524115 PPATQ06203 517 aa24.76■■□□□ 1.55
NKX6-3-202ENST00000524115 KLRC3Q07444 240 aa24.76■■□□□ 1.55
NKX6-3-202ENST00000524115 ECM1Q16610 540 aa24.76■■□□□ 1.55
NKX6-3-202ENST00000524115 HERC4Q5GLZ8 1057 aaPredicted RBP24.76■■□□□ 1.55
NKX6-3-202ENST00000524115 NOL9Q5SY16 702 aaKnown RBP24.76■■□□□ 1.55
NKX6-3-202ENST00000524115 RNF10Q8N5U6 811 aaKnown RBP24.76■■□□□ 1.55
NKX6-3-202ENST00000524115 FAM207AQ9NSI2 230 aaPredicted RBP24.76■■□□□ 1.55
NKX6-3-202ENST00000524115 L1RE1Q9UN81 338 aa24.76■■□□□ 1.55
NKX6-3-202ENST00000524115 DNM3Q9UQ16 869 aa24.76■■□□□ 1.55
NKX6-3-202ENST00000524115 PCDHA2Q9Y5H9 948 aa24.76■■□□□ 1.55
NKX6-3-202ENST00000524115 MYH7BA7E2Y1 1941 aa24.76■■□□□ 1.55
NKX6-3-202ENST00000524115 CASP8AP2Q9UKL3 1982 aa24.76■■□□□ 1.55
NKX6-3-202ENST00000524115 CCDC66A2RUB6 948 aa24.75■■□□□ 1.55
NKX6-3-202ENST00000524115 USP17L15C9J2P7 530 aa24.75■■□□□ 1.55
NKX6-3-202ENST00000524115 USP17L13C9JLJ4 530 aa24.75■■□□□ 1.55
NKX6-3-202ENST00000524115 USP17L11C9JVI0 530 aa24.75■■□□□ 1.55
NKX6-3-202ENST00000524115 USP17L18D6R9N7 530 aa24.75■■□□□ 1.55
NKX6-3-202ENST00000524115 USP17L22D6RA61 530 aa24.75■■□□□ 1.55
NKX6-3-202ENST00000524115 USP17L17D6RBQ6 530 aa24.75■■□□□ 1.55
NKX6-3-202ENST00000524115 USP17L19D6RCP7 530 aa24.75■■□□□ 1.55
NKX6-3-202ENST00000524115 USP17L20D6RJB6 530 aa24.75■■□□□ 1.55
NKX6-3-202ENST00000524115 ATP1A1P05023 1023 aaKnown RBP24.75■■□□□ 1.55
NKX6-3-202ENST00000524115 CYP11B2P19099 503 aa24.75■■□□□ 1.55
NKX6-3-202ENST00000524115 RPA1P27694 616 aa24.75■■□□□ 1.55
NKX6-3-202ENST00000524115 USP17L24Q0WX57 530 aa24.75■■□□□ 1.55
NKX6-3-202ENST00000524115 USP17L6PQ6QN14 398 aa24.75■■□□□ 1.55
NKX6-3-202ENST00000524115 RRAGAQ7L523 313 aa24.75■■□□□ 1.55
NKX6-3-202ENST00000524115 BAP1Q92560 729 aa24.75■■□□□ 1.55
NKX6-3-202ENST00000524115 SH2D4AQ9H788 454 aa24.75■■□□□ 1.55
NKX6-3-202ENST00000524115 EMILIN3Q9NT22 766 aa24.75■■□□□ 1.55
NKX6-3-202ENST00000524115 CETN3O15182 167 aa24.75■■□□□ 1.55
NKX6-3-202ENST00000524115 CYP3A4P08684 503 aa24.75■■□□□ 1.55
NKX6-3-202ENST00000524115 BMP3P12645 472 aa24.75■■□□□ 1.55
NKX6-3-202ENST00000524115 EIF4A3P38919 411 aaKnown RBP24.75■■□□□ 1.55
NKX6-3-202ENST00000524115 SNAPC2Q13487 334 aa24.75■■□□□ 1.55
NKX6-3-202ENST00000524115 SLC9C1Q4G0N8 1177 aa24.75■■□□□ 1.55
NKX6-3-202ENST00000524115 CTU1Q7Z7A3 348 aaKnown RBP24.75■■□□□ 1.55
NKX6-3-202ENST00000524115 ETNPPLQ8TBG4 499 aa24.75■■□□□ 1.55
NKX6-3-202ENST00000524115 PNKPQ96T60 521 aa24.75■■□□□ 1.55
NKX6-3-202ENST00000524115 ARHGAP20Q9P2F6 1191 aa24.75■■□□□ 1.55
NKX6-3-202ENST00000524115 SIPA1L1O43166 1804 aa24.74■■□□□ 1.55
NKX6-3-202ENST00000524115 E9PMD0 336 aa24.74■■□□□ 1.55
NKX6-3-202ENST00000524115 PIK3CDO00329 1044 aa24.74■■□□□ 1.55
NKX6-3-202ENST00000524115 FKTNO75072 461 aa24.74■■□□□ 1.55
NKX6-3-202ENST00000524115 RHOXF2BP0C7M4 288 aa24.74■■□□□ 1.55
NKX6-3-202ENST00000524115 CETPP11597 493 aa24.74■■□□□ 1.55
NKX6-3-202ENST00000524115 TCP1P17987 556 aaKnown RBP24.74■■□□□ 1.55
NKX6-3-202ENST00000524115 OAS2P29728 719 aaKnown RBP24.74■■□□□ 1.55
NKX6-3-202ENST00000524115 CRHR2Q13324 411 aa24.74■■□□□ 1.55
NKX6-3-202ENST00000524115 EEF2KMTQ96G04 330 aa24.74■■□□□ 1.55
NKX6-3-202ENST00000524115 RHOXF2Q9BQY4 288 aa24.74■■□□□ 1.55
NKX6-3-202ENST00000524115 LACRTQ9GZZ8 138 aa24.74■■□□□ 1.55
NKX6-3-202ENST00000524115 VIPAS39Q9H9C1 493 aa24.74■■□□□ 1.55
NKX6-3-202ENST00000524115 HERC5Q9UII4 1024 aaKnown RBP24.74■■□□□ 1.55
NKX6-3-202ENST00000524115 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.74■■□□□ 1.55
NKX6-3-202ENST00000524115 OTOFQ9HC10 1997 aa24.73■■□□□ 1.55
NKX6-3-202ENST00000524115 LRRC53A6NM62 1247 aa24.73■■□□□ 1.55
NKX6-3-202ENST00000524115 RBAK-RBAKDNI3L0D1 243 aa24.73■■□□□ 1.55
NKX6-3-202ENST00000524115 RAD21O60216 631 aa24.73■■□□□ 1.55
NKX6-3-202ENST00000524115 TBC1D12O60347 775 aa24.73■■□□□ 1.55
NKX6-3-202ENST00000524115 SERPING1P05155 500 aa24.73■■□□□ 1.55
NKX6-3-202ENST00000524115 MAGEA1P43355 309 aa24.73■■□□□ 1.55
NKX6-3-202ENST00000524115 SLC12A3P55017 1021 aa24.73■■□□□ 1.55
NKX6-3-202ENST00000524115 LRRC41Q15345 812 aa24.73■■□□□ 1.55
NKX6-3-202ENST00000524115 SFMBT2Q5VUG0 894 aa24.73■■□□□ 1.55
NKX6-3-202ENST00000524115 NCAPH2Q6IBW4 605 aa24.73■■□□□ 1.55
NKX6-3-202ENST00000524115 ZNF572Q7Z3I7 529 aaPredicted RBP24.73■■□□□ 1.55
NKX6-3-202ENST00000524115 TRIM59Q8IWR1 403 aa24.73■■□□□ 1.55
NKX6-3-202ENST00000524115 SYT2Q8N9I0 419 aaPredicted RBP24.73■■□□□ 1.55
NKX6-3-202ENST00000524115 CAGE1Q8TC20 777 aa24.73■■□□□ 1.55
NKX6-3-202ENST00000524115 POTEB3A0JP26 581 aa24.72■■□□□ 1.55
NKX6-3-202ENST00000524115 NDUFB10O96000 172 aa24.72■■□□□ 1.55
NKX6-3-202ENST00000524115 POTEBQ6S5H4 581 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms