RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 USP13Q92995 863 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P22-201ENST00000505315 ATP6V1E2Q96A05 226 aa4.26□□□□□ -1.73
HMGB1P22-201ENST00000505315 EAF2Q96CJ1 260 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P22-201ENST00000505315 TRIM11Q96F44 468 aa4.26□□□□□ -1.73
HMGB1P22-201ENST00000505315 FAM167BQ9BTA0 163 aa4.26□□□□□ -1.73
HMGB1P22-201ENST00000505315 ASPNQ9BXN1 380 aa4.26□□□□□ -1.73
HMGB1P22-201ENST00000505315 KRTAP3-3Q9BYR6 98 aa4.26□□□□□ -1.73
HMGB1P22-201ENST00000505315 KRTAP3-2Q9BYR7 98 aa4.26□□□□□ -1.73
HMGB1P22-201ENST00000505315 TRIT1Q9H3H1 467 aaKnown RBP4.26□□□□□ -1.73
HMGB1P22-201ENST00000505315 BRD9Q9H8M2 597 aa4.26□□□□□ -1.73
HMGB1P22-201ENST00000505315 ARMT1Q9H993 441 aa4.26□□□□□ -1.73
HMGB1P22-201ENST00000505315 PLEKHA5Q9HAU0 1116 aa4.26□□□□□ -1.73
HMGB1P22-201ENST00000505315 STARD7Q9NQZ5 370 aa4.26□□□□□ -1.73
HMGB1P22-201ENST00000505315 CHST7Q9NS84 486 aa4.26□□□□□ -1.73
HMGB1P22-201ENST00000505315 TBC1D22BQ9NU19 505 aa4.26□□□□□ -1.73
HMGB1P22-201ENST00000505315 BTG4Q9NY30 223 aa4.26□□□□□ -1.73
HMGB1P22-201ENST00000505315 CRIM1Q9NZV1 1036 aa4.26□□□□□ -1.73
HMGB1P22-201ENST00000505315 PPARGC1AQ9UBK2 798 aaKnown RBP4.26□□□□□ -1.73
HMGB1P22-201ENST00000505315 SERPINB13Q9UIV8 391 aa4.26□□□□□ -1.73
HMGB1P22-201ENST00000505315 CBLCQ9ULV8 474 aa4.26□□□□□ -1.73
HMGB1P22-201ENST00000505315 MINPP1Q9UNW1 487 aa4.26□□□□□ -1.73
HMGB1P22-201ENST00000505315 SRPK3Q9UPE1 567 aa4.26□□□□□ -1.73
HMGB1P22-201ENST00000505315 TTLL3Q9Y4R7 772 aa4.26□□□□□ -1.73
HMGB1P22-201ENST00000505315 PCDHGC5Q9Y5F6 944 aa4.26□□□□□ -1.73
HMGB1P22-201ENST00000505315 FAM170AA1A519 330 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 ANKRD18BA2A2Z9 1011 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 CDC14CA4D256 554 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 SOBPA7XYQ1 873 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 FAM155AB1AL88 458 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 DLL1O00548 723 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 SCDO00767 359 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 FFAR2O15552 330 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 IRAK2O43187 625 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 GDF9O60383 454 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 SKAP2O75563 359 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 BAIAP3O94812 1187 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 LRIG2O94898 1065 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 RPN1P04843 607 aaKnown RBP4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 GNAT1P11488 350 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 MTHFD2P13995 350 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 CAPN3P20807 821 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 ENPP1P22413 925 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 PTX3P26022 381 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 AFF1P51825 1210 aaKnown RBP4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 SLC5A3P53794 718 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 NAP1L1P55209 391 aaKnown RBP4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 BCAR1P56945 870 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 JAM2P57087 298 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 PHC1P78364 1004 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 CCT2P78371 535 aaKnown RBP4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 PTSQ03393 145 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 CYP4F3Q08477 520 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 TMEM132BQ14DG7 1078 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 POLD3Q15054 466 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 EXOSC6Q5RKV6 272 aaKnown RBP4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 CFAP58Q5T655 872 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 NUTM2GQ5VZR2 741 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 E4F1Q66K89 784 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 CREB3L3Q68CJ9 461 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 LETMD1Q6P1Q0 360 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 CRTC3Q6UUV7 619 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 C16orf54Q6UWD8 224 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 TMC3Q7Z5M5 1100 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 ZZZ3Q8IYH5 903 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 TXLNBQ8N3L3 684 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 OXR1Q8N573 874 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 RCBTB1Q8NDN9 531 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 NPLOC4Q8TAT6 608 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 PPP1R13LQ8WUF5 828 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 RNF141Q8WVD5 230 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 TRAPPC12Q8WVT3 735 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 RTF1Q92541 710 aaKnown RBP4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 RUBCNQ92622 972 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 PHKBQ93100 1093 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 MUL1Q969V5 352 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 ISL2Q96A47 359 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 ZNF837Q96EG3 531 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 PKNOX2Q96KN3 472 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 SDF4Q9BRK5 362 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 MCMBPQ9BTE3 642 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 ZNF287Q9HBT7 754 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 ALG13Q9NP73 1137 aaKnown RBP4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 PNPLA8Q9NP80 782 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 KMT5AQ9NQR1 393 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 PDP2Q9P2J9 529 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 GRHPRQ9UBQ7 328 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 OGDHLQ9ULD0 1010 aa4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 MAGED1Q9Y5V3 778 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P22-201ENST00000505315 NPHP3-ACAD11A0A0J9YXS1 232 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 BICDL2A1A5D9 508 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 SYNDIG1LA6NDD5 238 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 CCDC154A6NI56 674 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 EYA2O00167 538 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 AURKAO14965 403 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 APOL3O95236 402 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 PRAMEF1O95521 474 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 CNOT4O95628 575 aaKnown RBP4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 DLGAP3O95886 979 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 GSNP06396 782 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 PTMAP06454 111 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms