RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 TRIML1Q8N9V2 468 aa8.61□□□□□ -1.03
CDC42-205ENST00000498236 KDF1Q8NAX2 398 aaPredicted RBP8.61□□□□□ -1.03
CDC42-205ENST00000498236 ETNPPLQ8TBG4 499 aa8.61□□□□□ -1.03
CDC42-205ENST00000498236 COL26A1Q96A83 441 aa8.61□□□□□ -1.03
CDC42-205ENST00000498236 ATG4CQ96DT6 458 aa8.61□□□□□ -1.03
CDC42-205ENST00000498236 FAM20AQ96MK3 541 aa8.61□□□□□ -1.03
CDC42-205ENST00000498236 PURBQ96QR8 312 aaKnown RBP8.61□□□□□ -1.03
CDC42-205ENST00000498236 BPIFA3Q9BQP9 254 aa8.61□□□□□ -1.03
CDC42-205ENST00000498236 MKNK1Q9BUB5 465 aa8.61□□□□□ -1.03
CDC42-205ENST00000498236 NAT10Q9H0A0 1025 aaKnown RBP8.61□□□□□ -1.03
CDC42-205ENST00000498236 RAVER2Q9HCJ3 691 aaKnown RBP8.61□□□□□ -1.03
CDC42-205ENST00000498236 DISC1Q9NRI5 854 aa8.61□□□□□ -1.03
CDC42-205ENST00000498236 CCDC39Q9UFE4 941 aa8.61□□□□□ -1.03
CDC42-205ENST00000498236 ZNF214Q9UL59 606 aaPredicted RBP8.61□□□□□ -1.03
CDC42-205ENST00000498236 CTDP1Q9Y5B0 961 aaPredicted RBP8.61□□□□□ -1.03
CDC42-205ENST00000498236 PTPRFP10586 1907 aa8.6□□□□□ -1.03
CDC42-205ENST00000498236 IGLV3-22A0A075B6J6 115 aa8.6□□□□□ -1.03
CDC42-205ENST00000498236 FAM86B1E9PN63 330 aa8.6□□□□□ -1.03
CDC42-205ENST00000498236 NFIBO00712 420 aa8.6□□□□□ -1.03
CDC42-205ENST00000498236 SMC2O95347 1197 aa8.6□□□□□ -1.03
CDC42-205ENST00000498236 ABL1P00519 1130 aa8.6□□□□□ -1.03
CDC42-205ENST00000498236 FAM86B2P0C5J1 330 aa8.6□□□□□ -1.03
CDC42-205ENST00000498236 TAL1P17542 331 aaPredicted RBP8.6□□□□□ -1.03
CDC42-205ENST00000498236 TECP42680 631 aa8.6□□□□□ -1.03
CDC42-205ENST00000498236 TXKP42681 527 aa8.6□□□□□ -1.03
CDC42-205ENST00000498236 ZNF165P49910 485 aa8.6□□□□□ -1.03
CDC42-205ENST00000498236 NLRP12P59046 1061 aa8.6□□□□□ -1.03
CDC42-205ENST00000498236 FOXK2Q01167 660 aa8.6□□□□□ -1.03
CDC42-205ENST00000498236 PNOCQ13519 176 aa8.6□□□□□ -1.03
CDC42-205ENST00000498236 TLR1Q15399 786 aa8.6□□□□□ -1.03
CDC42-205ENST00000498236 ZRSR1Q15695 479 aaKnown RBP8.6□□□□□ -1.03
CDC42-205ENST00000498236 NAALADL2Q58DX5 795 aa8.6□□□□□ -1.03
CDC42-205ENST00000498236 CT47A1Q5JQC4 288 aaPredicted RBP8.6□□□□□ -1.03
CDC42-205ENST00000498236 HYIQ5T013 277 aa8.6□□□□□ -1.03
CDC42-205ENST00000498236 RRAGBQ5VZM2 374 aa8.6□□□□□ -1.03
CDC42-205ENST00000498236 XRRA1Q6P2D8 792 aa8.6□□□□□ -1.03
CDC42-205ENST00000498236 FASTKD5Q7L8L6 764 aaKnown RBP8.6□□□□□ -1.03
CDC42-205ENST00000498236 NIPA1Q7RTP0 329 aa8.6□□□□□ -1.03
CDC42-205ENST00000498236 CABP7Q86V35 215 aa8.6□□□□□ -1.03
CDC42-205ENST00000498236 PDILTQ8N807 584 aa8.6□□□□□ -1.03
CDC42-205ENST00000498236 TBC1D5Q92609 795 aa8.6□□□□□ -1.03
CDC42-205ENST00000498236 VTI1AQ96AJ9 217 aa8.6□□□□□ -1.03
CDC42-205ENST00000498236 DHX58Q96C10 678 aa8.6□□□□□ -1.03
CDC42-205ENST00000498236 PAGE5Q96GU1 130 aa8.6□□□□□ -1.03
CDC42-205ENST00000498236 TRERF1Q96PN7 1200 aa8.6□□□□□ -1.03
CDC42-205ENST00000498236 GSDMAQ96QA5 445 aa8.6□□□□□ -1.03
CDC42-205ENST00000498236 MMTAG2Q9BU76 263 aaKnown RBP8.6□□□□□ -1.03
CDC42-205ENST00000498236 TEX13BQ9BXU2 312 aa8.6□□□□□ -1.03
CDC42-205ENST00000498236 PANK2Q9BZ23 570 aa8.6□□□□□ -1.03
CDC42-205ENST00000498236 TTC12Q9H892 705 aaPredicted RBP8.6□□□□□ -1.03
CDC42-205ENST00000498236 ELP3Q9H9T3 547 aa8.6□□□□□ -1.03
CDC42-205ENST00000498236 LRWD1Q9UFC0 647 aa8.6□□□□□ -1.03
CDC42-205ENST00000498236 EGFL7Q9UHF1 273 aa8.6□□□□□ -1.03
CDC42-205ENST00000498236 PCDHA12Q9UN75 941 aa8.6□□□□□ -1.03
CDC42-205ENST00000498236 PCDHA5Q9Y5H7 936 aa8.6□□□□□ -1.03
CDC42-205ENST00000498236 A0A0G2JMZ2 1700 aa8.6□□□□□ -1.03
CDC42-205ENST00000498236 RBBP6Q7Z6E9 1792 aaKnown RBP8.59□□□□□ -1.03
CDC42-205ENST00000498236 MEIS1O00470 390 aa8.59□□□□□ -1.03
CDC42-205ENST00000498236 BCRP11274 1271 aa8.59□□□□□ -1.03
CDC42-205ENST00000498236 ALAS1P13196 640 aa8.59□□□□□ -1.03
CDC42-205ENST00000498236 STAT6P42226 847 aa8.59□□□□□ -1.03
CDC42-205ENST00000498236 SETQ01105 290 aaPredicted RBP8.59□□□□□ -1.03
CDC42-205ENST00000498236 SPIRE1Q08AE8 756 aa8.59□□□□□ -1.03
CDC42-205ENST00000498236 PABPC4Q13310 644 aaKnown RBP eCLIP8.59□□□□□ -1.03
CDC42-205ENST00000498236 MOGSQ13724 837 aa8.59□□□□□ -1.03
CDC42-205ENST00000498236 TMEM132BQ14DG7 1078 aa8.59□□□□□ -1.03
CDC42-205ENST00000498236 KARSQ15046 597 aaKnown RBP8.59□□□□□ -1.03
CDC42-205ENST00000498236 IQCB1Q15051 598 aa8.59□□□□□ -1.03
CDC42-205ENST00000498236 CEP55Q53EZ4 464 aa8.59□□□□□ -1.03
CDC42-205ENST00000498236 PRR16Q569H4 304 aa8.59□□□□□ -1.03
CDC42-205ENST00000498236 MUM1L1Q5H9M0 696 aa8.59□□□□□ -1.03
CDC42-205ENST00000498236 TREML2Q5T2D2 321 aa8.59□□□□□ -1.03
CDC42-205ENST00000498236 LCE2CQ5TA81 110 aa8.59□□□□□ -1.03
CDC42-205ENST00000498236 PCNX4Q63HM2 1172 aa8.59□□□□□ -1.03
CDC42-205ENST00000498236 MOB2Q70IA6 237 aa8.59□□□□□ -1.03
CDC42-205ENST00000498236 FCHSD1Q86WN1 690 aa8.59□□□□□ -1.03
CDC42-205ENST00000498236 SLC9A9Q8IVB4 645 aa8.59□□□□□ -1.03
CDC42-205ENST00000498236 CPXCR1Q8N123 301 aa8.59□□□□□ -1.03
CDC42-205ENST00000498236 RNF214Q8ND24 703 aa8.59□□□□□ -1.03
CDC42-205ENST00000498236 CHST13Q8NET6 341 aa8.59□□□□□ -1.03
CDC42-205ENST00000498236 SYTL5Q8TDW5 730 aaPredicted RBP8.59□□□□□ -1.03
CDC42-205ENST00000498236 ANP32BQ92688 251 aaKnown RBP8.59□□□□□ -1.03
CDC42-205ENST00000498236 SMARCE1Q969G3 411 aa8.59□□□□□ -1.03
CDC42-205ENST00000498236 CALML4Q96GE6 196 aa8.59□□□□□ -1.03
CDC42-205ENST00000498236 WNK4Q96J92 1243 aa8.59□□□□□ -1.03
CDC42-205ENST00000498236 CLMNQ96JQ2 1002 aa8.59□□□□□ -1.03
CDC42-205ENST00000498236 DNAJC25Q9H1X3 360 aa8.59□□□□□ -1.03
CDC42-205ENST00000498236 RRAGCQ9HB90 399 aa8.59□□□□□ -1.03
CDC42-205ENST00000498236 CBX8Q9HC52 389 aa8.59□□□□□ -1.03
CDC42-205ENST00000498236 KBTBD4Q9NVX7 518 aa8.59□□□□□ -1.03
CDC42-205ENST00000498236 SEPT3Q9UH03 358 aa8.59□□□□□ -1.03
CDC42-205ENST00000498236 AGTPBP1Q9UPW5 1226 aa8.59□□□□□ -1.03
CDC42-205ENST00000498236 HRH3Q9Y5N1 445 aa8.59□□□□□ -1.03
CDC42-205ENST00000498236 SMCHD1A6NHR9 2005 aa8.59□□□□□ -1.03
CDC42-205ENST00000498236 KDM3AQ9Y4C1 1321 aa8.58□□□□□ -1.04
CDC42-205ENST00000498236 PP2D1A8MPX8 630 aa8.58□□□□□ -1.04
CDC42-205ENST00000498236 CDK2AP1O14519 115 aa8.58□□□□□ -1.04
CDC42-205ENST00000498236 FOXN1O15353 648 aa8.58□□□□□ -1.04
CDC42-205ENST00000498236 MSH4O15457 936 aa8.58□□□□□ -1.04
CDC42-205ENST00000498236 MARCH6O60337 910 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms