RNA–Protein interactions for RNA: ENST00000493335.5

SMTN-219, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 2,937 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-219ENST00000493335 NBPF5PQ86XG9 351 aaPredicted RBP16.12■□□□□ 0.17
SMTN-219ENST00000493335 TRIM59Q8IWR1 403 aa16.12■□□□□ 0.17
SMTN-219ENST00000493335 TEX11Q8IYF3 940 aa16.12■□□□□ 0.17
SMTN-219ENST00000493335 CCDC26Q8TAB7 109 aa16.12■□□□□ 0.17
SMTN-219ENST00000493335 MGARPQ8TDB4 240 aa16.12■□□□□ 0.17
SMTN-219ENST00000493335 TBC1D22AQ8WUA7 517 aa16.12■□□□□ 0.17
SMTN-219ENST00000493335 DNAJC19Q96DA6 116 aa16.12■□□□□ 0.17
SMTN-219ENST00000493335 PSMD1Q99460 953 aa16.12■□□□□ 0.17
SMTN-219ENST00000493335 A1CFQ9NQ94 594 aaKnown RBP16.12■□□□□ 0.17
SMTN-219ENST00000493335 ARMCX3Q9UH62 379 aaPredicted RBP16.12■□□□□ 0.17
SMTN-219ENST00000493335 COL4A1P02462 1669 aa16.11■□□□□ 0.17
SMTN-219ENST00000493335 DDR1Q08345 913 aa16.11■□□□□ 0.17
SMTN-219ENST00000493335 TBC1D1Q86TI0 1168 aaPredicted RBP16.11■□□□□ 0.17
SMTN-219ENST00000493335 FMO2Q99518 471 aa16.11■□□□□ 0.17
SMTN-219ENST00000493335 SPZ1Q9BXG8 430 aa16.11■□□□□ 0.17
SMTN-219ENST00000493335 EDEM3Q9BZQ6 932 aa16.11■□□□□ 0.17
SMTN-219ENST00000493335 BCS1LQ9Y276 419 aa16.11■□□□□ 0.17
SMTN-219ENST00000493335 TMEM110-MUSTN1A8MSY1 372 aa16.11■□□□□ 0.17
SMTN-219ENST00000493335 H0YGN5 161 aa16.11■□□□□ 0.17
SMTN-219ENST00000493335 FLOT1O75955 427 aa16.11■□□□□ 0.17
SMTN-219ENST00000493335 SHBGP04278 402 aa16.11■□□□□ 0.17
SMTN-219ENST00000493335 H2AFZP0C0S5 128 aa16.11■□□□□ 0.17
SMTN-219ENST00000493335 PLA2G4BP0C869 781 aa16.11■□□□□ 0.17
SMTN-219ENST00000493335 CASP5P51878 434 aa16.11■□□□□ 0.17
SMTN-219ENST00000493335 BIRC3Q13489 604 aa16.11■□□□□ 0.17
SMTN-219ENST00000493335 IFI16Q16666 785 aaKnown RBP16.11■□□□□ 0.17
SMTN-219ENST00000493335 NBPF9Q3BBW0 867 aa16.11■□□□□ 0.17
SMTN-219ENST00000493335 CCDC38Q502W7 563 aa16.11■□□□□ 0.17
SMTN-219ENST00000493335 C6orf89Q6UWU4 347 aa16.11■□□□□ 0.17
SMTN-219ENST00000493335 H2AFVQ71UI9 128 aa16.11■□□□□ 0.17
SMTN-219ENST00000493335 PROM2Q8N271 834 aa16.11■□□□□ 0.17
SMTN-219ENST00000493335 SCFD1Q8WVM8 642 aa16.11■□□□□ 0.17
SMTN-219ENST00000493335 CNKSR2Q8WXI2 1034 aa16.11■□□□□ 0.17
SMTN-219ENST00000493335 ELAC2Q9BQ52 826 aaKnown RBP16.11■□□□□ 0.17
SMTN-219ENST00000493335 LZTS2Q9BRK4 669 aa16.11■□□□□ 0.17
SMTN-219ENST00000493335 ACTR5Q9H9F9 607 aaPredicted RBP16.11■□□□□ 0.17
SMTN-219ENST00000493335 SNX24Q9Y343 169 aa16.11■□□□□ 0.17
SMTN-219ENST00000493335 NFS1Q9Y697 457 aa16.11■□□□□ 0.17
SMTN-219ENST00000493335 POTEFA5A3E0 1075 aa16.1■□□□□ 0.17
SMTN-219ENST00000493335 POTEIP0CG38 1075 aa16.1■□□□□ 0.17
SMTN-219ENST00000493335 PABPC4Q13310 644 aaKnown RBP eCLIP16.1■□□□□ 0.175e-6■□□□□ 10.8
SMTN-219ENST00000493335 POTEGQ6S5H5 508 aa16.1■□□□□ 0.17
SMTN-219ENST00000493335 POTEEQ6S8J3 1075 aa16.1■□□□□ 0.17
SMTN-219ENST00000493335 TMC3Q7Z5M5 1100 aa16.1■□□□□ 0.17
SMTN-219ENST00000493335 CCDC25Q86WR0 208 aa16.1■□□□□ 0.17
SMTN-219ENST00000493335 PBKQ96KB5 322 aa16.1■□□□□ 0.17
SMTN-219ENST00000493335 LRRC27Q9C0I9 530 aa16.1■□□□□ 0.17
SMTN-219ENST00000493335 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.1■□□□□ 0.172e-6■■■■■ 149.1
SMTN-219ENST00000493335 BCORQ6W2J9 1755 aa16.1■□□□□ 0.17
SMTN-219ENST00000493335 MMEP08473 750 aa16.1■□□□□ 0.17
SMTN-219ENST00000493335 BTDP43251 543 aa16.1■□□□□ 0.17
SMTN-219ENST00000493335 PSMD2Q13200 908 aa16.1■□□□□ 0.17
SMTN-219ENST00000493335 MTMR3Q13615 1198 aa16.1■□□□□ 0.17
SMTN-219ENST00000493335 TBC1D9BQ66K14 1250 aa16.1■□□□□ 0.17
SMTN-219ENST00000493335 LRIG3Q6UXM1 1119 aa16.1■□□□□ 0.17
SMTN-219ENST00000493335 VPS36Q86VN1 386 aa16.1■□□□□ 0.17
SMTN-219ENST00000493335 TPCN2Q8NHX9 752 aa16.1■□□□□ 0.17
SMTN-219ENST00000493335 SCFD2Q8WU76 684 aa16.1■□□□□ 0.17
SMTN-219ENST00000493335 TACO1Q9BSH4 297 aaKnown RBP16.1■□□□□ 0.17
SMTN-219ENST00000493335 CHORDC1Q9UHD1 332 aaPredicted RBP16.1■□□□□ 0.17
SMTN-219ENST00000493335 NUP98P52948 1817 aa16.09■□□□□ 0.17
SMTN-219ENST00000493335 SFI1A8K8P3 1242 aa16.09■□□□□ 0.17
SMTN-219ENST00000493335 XRCC5P13010 732 aaKnown RBP16.09■□□□□ 0.17
SMTN-219ENST00000493335 FXR2P51116 673 aaKnown RBP eCLIP16.09■□□□□ 0.17
SMTN-219ENST00000493335 SRP68Q9UHB9 627 aaKnown RBP16.09■□□□□ 0.17
SMTN-219ENST00000493335 KIF3CO14782 793 aa16.09■□□□□ 0.17
SMTN-219ENST00000493335 KCNQ2O43526 872 aa16.09■□□□□ 0.17
SMTN-219ENST00000493335 SKAP2O75563 359 aaPredicted RBP16.09■□□□□ 0.17
SMTN-219ENST00000493335 CHN1P15882 459 aa16.09■□□□□ 0.17
SMTN-219ENST00000493335 PDE6BP35913 854 aa16.09■□□□□ 0.17
SMTN-219ENST00000493335 INHBEP58166 350 aa16.09■□□□□ 0.17
SMTN-219ENST00000493335 CYP4A11Q02928 519 aa16.09■□□□□ 0.17
SMTN-219ENST00000493335 ZCWPW2Q504Y3 356 aa16.09■□□□□ 0.17
SMTN-219ENST00000493335 NAIF1Q69YI7 327 aaPredicted RBP16.09■□□□□ 0.17
SMTN-219ENST00000493335 GLYCTKQ8IVS8 523 aa16.09■□□□□ 0.17
SMTN-219ENST00000493335 CHMP6Q96FZ7 201 aa16.09■□□□□ 0.17
SMTN-219ENST00000493335 IKZF4Q9H2S9 585 aa16.09■□□□□ 0.17
SMTN-219ENST00000493335 BCAS3Q9H6U6 928 aa16.09■□□□□ 0.17
SMTN-219ENST00000493335 ZNF287Q9HBT7 754 aa16.09■□□□□ 0.17
SMTN-219ENST00000493335 SLC24A3Q9HC58 644 aa16.09■□□□□ 0.17
SMTN-219ENST00000493335 MLXIPLQ9NP71 852 aa16.09■□□□□ 0.17
SMTN-219ENST00000493335 TMOD4Q9NZQ9 345 aa16.09■□□□□ 0.17
SMTN-219ENST00000493335 MCM8Q9UJA3 840 aa16.09■□□□□ 0.17
SMTN-219ENST00000493335 ABCB11O95342 1321 aa16.09■□□□□ 0.17
SMTN-219ENST00000493335 ATXN2Q99700 1313 aaKnown RBP16.09■□□□□ 0.17
SMTN-219ENST00000493335 DOCK2Q92608 1830 aa16.09■□□□□ 0.17
SMTN-219ENST00000493335 USP17L15C9J2P7 530 aa16.08■□□□□ 0.17
SMTN-219ENST00000493335 USP17L13C9JLJ4 530 aa16.08■□□□□ 0.17
SMTN-219ENST00000493335 USP17L11C9JVI0 530 aa16.08■□□□□ 0.17
SMTN-219ENST00000493335 USP17L18D6R9N7 530 aa16.08■□□□□ 0.17
SMTN-219ENST00000493335 USP17L22D6RA61 530 aa16.08■□□□□ 0.17
SMTN-219ENST00000493335 USP17L17D6RBQ6 530 aa16.08■□□□□ 0.17
SMTN-219ENST00000493335 USP17L19D6RCP7 530 aa16.08■□□□□ 0.17
SMTN-219ENST00000493335 USP17L20D6RJB6 530 aa16.08■□□□□ 0.17
SMTN-219ENST00000493335 F8W031 263 aaPredicted RBP16.08■□□□□ 0.17
SMTN-219ENST00000493335 PAX7P23759 505 aa16.08■□□□□ 0.17
SMTN-219ENST00000493335 USP17L24Q0WX57 530 aa16.08■□□□□ 0.17
SMTN-219ENST00000493335 PREPLQ4J6C6 727 aaPredicted RBP16.08■□□□□ 0.17
SMTN-219ENST00000493335 TTBK2Q6IQ55 1244 aa16.08■□□□□ 0.17
SMTN-219ENST00000493335 AADACL2Q6P093 401 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms