RNA–Protein interactions for RNA: ENST00000482236.5

SORT1-204, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-204ENST00000482236 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.68□□□□□ -0.387e-10■■■■■ 35.1
SORT1-204ENST00000482236 TSHZ1Q6ZSZ6 1077 aa12.68□□□□□ -0.38
SORT1-204ENST00000482236 MIER3Q7Z3K6 550 aa12.68□□□□□ -0.38
SORT1-204ENST00000482236 CCDC60Q8IWA6 550 aaPredicted RBP12.68□□□□□ -0.38
SORT1-204ENST00000482236 ZBTB10Q96DT7 871 aa12.68□□□□□ -0.38
SORT1-204ENST00000482236 AIFM3Q96NN9 605 aa12.68□□□□□ -0.38
SORT1-204ENST00000482236 TGS1Q96RS0 853 aaKnown RBP12.68□□□□□ -0.38
SORT1-204ENST00000482236 NAP1L4Q99733 375 aaKnown RBP12.68□□□□□ -0.38
SORT1-204ENST00000482236 DDX25Q9UHL0 483 aaKnown RBP12.68□□□□□ -0.38
SORT1-204ENST00000482236 LRFN2Q9ULH4 789 aa12.68□□□□□ -0.38
SORT1-204ENST00000482236 AKT3Q9Y243 479 aa12.68□□□□□ -0.38
SORT1-204ENST00000482236 INSL6Q9Y581 213 aa12.68□□□□□ -0.38
SORT1-204ENST00000482236 STK36Q9NRP7 1315 aa12.67□□□□□ -0.38
SORT1-204ENST00000482236 IGLV3-22A0A075B6J6 115 aa12.67□□□□□ -0.38
SORT1-204ENST00000482236 CCNT1O60563 726 aaKnown RBP12.67□□□□□ -0.38
SORT1-204ENST00000482236 PFKFB2O60825 505 aa12.67□□□□□ -0.38
SORT1-204ENST00000482236 KLRC1P26715 233 aa12.67□□□□□ -0.38
SORT1-204ENST00000482236 TMOD1P28289 359 aa12.67□□□□□ -0.38
SORT1-204ENST00000482236 SFNP31947 248 aa12.67□□□□□ -0.38
SORT1-204ENST00000482236 KRT2P35908 639 aa12.67□□□□□ -0.38
SORT1-204ENST00000482236 TAP1Q03518 808 aa12.67□□□□□ -0.38
SORT1-204ENST00000482236 NFX1Q12986 1120 aaKnown RBP12.67□□□□□ -0.38
SORT1-204ENST00000482236 INF2Q27J81 1249 aa12.67□□□□□ -0.38
SORT1-204ENST00000482236 ZNF484Q5JVG2 852 aa12.67□□□□□ -0.38
SORT1-204ENST00000482236 ODR4Q5SWX8 454 aa12.67□□□□□ -0.38
SORT1-204ENST00000482236 TRAF7Q6Q0C0 670 aa12.67□□□□□ -0.38
SORT1-204ENST00000482236 MTHFD1LQ6UB35 978 aa12.67□□□□□ -0.38
SORT1-204ENST00000482236 PIK3AP1Q6ZUJ8 805 aa12.67□□□□□ -0.38
SORT1-204ENST00000482236 FAM177A1Q8N128 213 aaPredicted RBP12.67□□□□□ -0.38
SORT1-204ENST00000482236 NECAB1Q8N987 351 aa12.67□□□□□ -0.38
SORT1-204ENST00000482236 GDPD5Q8WTR4 605 aa12.67□□□□□ -0.38
SORT1-204ENST00000482236 BBXQ8WY36 941 aaPredicted RBP12.67□□□□□ -0.38
SORT1-204ENST00000482236 CCDC43Q96MW1 224 aaKnown RBP12.67□□□□□ -0.38
SORT1-204ENST00000482236 PCYT2Q99447 389 aa12.67□□□□□ -0.38
SORT1-204ENST00000482236 DISC1Q9NRI5 854 aa12.67□□□□□ -0.38
SORT1-204ENST00000482236 NRBP2Q9NSY0 501 aa12.67□□□□□ -0.38
SORT1-204ENST00000482236 THEGQ9P2T0 379 aa12.67□□□□□ -0.38
SORT1-204ENST00000482236 SEPT9Q9UHD8 586 aaPredicted RBP12.67□□□□□ -0.38
SORT1-204ENST00000482236 PCDHA2Q9Y5H9 948 aa12.67□□□□□ -0.38
SORT1-204ENST00000482236 COL1A2P08123 1366 aa12.67□□□□□ -0.38
SORT1-204ENST00000482236 DENND3A2RUS2 1198 aa12.66□□□□□ -0.38
SORT1-204ENST00000482236 LCHNA4D1U4 455 aa12.66□□□□□ -0.38
SORT1-204ENST00000482236 MBLAC1A4D2B0 266 aaPredicted RBP12.66□□□□□ -0.38
SORT1-204ENST00000482236 RFXAPO00287 272 aa12.66□□□□□ -0.38
SORT1-204ENST00000482236 MSH4O15457 936 aa12.66□□□□□ -0.38
SORT1-204ENST00000482236 TDP2O95551 362 aa12.66□□□□□ -0.38
SORT1-204ENST00000482236 CHRNA1P02708 482 aa12.66□□□□□ -0.38
SORT1-204ENST00000482236 CD52P31358 61 aa12.66□□□□□ -0.38
SORT1-204ENST00000482236 CIITAP33076 1130 aa12.66□□□□□ -0.38
SORT1-204ENST00000482236 PRKCEQ02156 737 aa12.66□□□□□ -0.38
SORT1-204ENST00000482236 SAFBQ15424 915 aaKnown RBP eCLIP12.66□□□□□ -0.38
SORT1-204ENST00000482236 ABHD15Q6UXT9 468 aa12.66□□□□□ -0.38
SORT1-204ENST00000482236 NEK8Q86SG6 692 aa12.66□□□□□ -0.38
SORT1-204ENST00000482236 NME8Q8N427 588 aa12.66□□□□□ -0.38
SORT1-204ENST00000482236 USP38Q8NB14 1042 aa12.66□□□□□ -0.38
SORT1-204ENST00000482236 DAGLBQ8NCG7 672 aa12.66□□□□□ -0.38
SORT1-204ENST00000482236 FBXO22Q8NEZ5 403 aa12.66□□□□□ -0.38
SORT1-204ENST00000482236 VWCEQ96DN2 955 aa12.66□□□□□ -0.38
SORT1-204ENST00000482236 RIT2Q99578 217 aa12.66□□□□□ -0.38
SORT1-204ENST00000482236 TRIP12Q14669 1992 aaPredicted RBP12.66□□□□□ -0.38
SORT1-204ENST00000482236 SMIM35A0A1B0GVV1 85 aa12.65□□□□□ -0.38
SORT1-204ENST00000482236 ADAMTS3O15072 1205 aa12.65□□□□□ -0.38
SORT1-204ENST00000482236 CSPG5O95196 566 aa12.65□□□□□ -0.38
SORT1-204ENST00000482236 BAG4O95429 457 aaKnown RBP12.65□□□□□ -0.38
SORT1-204ENST00000482236 OATP04181 439 aa12.65□□□□□ -0.38
SORT1-204ENST00000482236 STAG3L1P0CL83 205 aa12.65□□□□□ -0.38
SORT1-204ENST00000482236 CTNNB1P35222 781 aa12.65□□□□□ -0.38
SORT1-204ENST00000482236 TBC1D8BQ0IIM8 1120 aa12.65□□□□□ -0.38
SORT1-204ENST00000482236 LPIN1Q14693 890 aa12.65□□□□□ -0.38
SORT1-204ENST00000482236 GPNMBQ14956 572 aa12.65□□□□□ -0.38
SORT1-204ENST00000482236 PTPROQ16827 1216 aa12.65□□□□□ -0.38
SORT1-204ENST00000482236 TCTN1Q2MV58 587 aa12.65□□□□□ -0.38
SORT1-204ENST00000482236 FAM26DQ5JW98 314 aa12.65□□□□□ -0.38
SORT1-204ENST00000482236 FBXO47Q5MNV8 452 aa12.65□□□□□ -0.38
SORT1-204ENST00000482236 SPOUT1Q5T280 376 aaKnown RBP12.65□□□□□ -0.38
SORT1-204ENST00000482236 EP400NLQ6ZTU2 488 aa12.65□□□□□ -0.38
SORT1-204ENST00000482236 FIBCD1Q8N539 461 aa12.65□□□□□ -0.38
SORT1-204ENST00000482236 FAM184AQ8NB25 1140 aa12.65□□□□□ -0.38
SORT1-204ENST00000482236 SYMPKQ92797 1274 aaKnown RBP12.65□□□□□ -0.38
SORT1-204ENST00000482236 GTF3C6Q969F1 213 aa12.65□□□□□ -0.38
SORT1-204ENST00000482236 IL17RAQ96F46 866 aa12.65□□□□□ -0.38
SORT1-204ENST00000482236 FTHL17Q9BXU8 183 aa12.65□□□□□ -0.38
SORT1-204ENST00000482236 CELF4Q9BZC1 486 aaKnown RBP12.65□□□□□ -0.38
SORT1-204ENST00000482236 SUGCTQ9HAC7 445 aa12.65□□□□□ -0.38
SORT1-204ENST00000482236 GBF1Q92538 1859 aa12.64□□□□□ -0.39
SORT1-204ENST00000482236 LINC01553A4QN01 128 aa12.64□□□□□ -0.39
SORT1-204ENST00000482236 MAGEB2O15479 319 aa12.64□□□□□ -0.39
SORT1-204ENST00000482236 DTNBO60941 627 aa12.64□□□□□ -0.39
SORT1-204ENST00000482236 RPS6KA5O75582 802 aa12.64□□□□□ -0.39
SORT1-204ENST00000482236 ATG7O95352 703 aa12.64□□□□□ -0.39
SORT1-204ENST00000482236 GCFC2P16383 781 aaKnown RBP12.64□□□□□ -0.39
SORT1-204ENST00000482236 ADAM17P78536 824 aa12.64□□□□□ -0.39
SORT1-204ENST00000482236 BTG3Q14201 252 aaPredicted RBP12.64□□□□□ -0.39
SORT1-204ENST00000482236 ADGRE1Q14246 886 aa12.64□□□□□ -0.39
SORT1-204ENST00000482236 AAK1Q2M2I8 961 aa12.64□□□□□ -0.39
SORT1-204ENST00000482236 TMEM266Q2M3C6 531 aa12.64□□□□□ -0.39
SORT1-204ENST00000482236 MTERF2Q49AM1 385 aa12.64□□□□□ -0.39
SORT1-204ENST00000482236 Q4G0T1 1027 aa12.64□□□□□ -0.39
SORT1-204ENST00000482236 MARCH8Q5T0T0 291 aa12.64□□□□□ -0.39
SORT1-204ENST00000482236 RPAINQ86UA6 219 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms