RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 TLR7Q9NYK1 1049 aaKnown RBP3.31□□□□□ -1.88
HMGN4-202ENST00000477243 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.31□□□□□ -1.88
HMGN4-202ENST00000477243 B4GALT6Q9UBX8 382 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 CFDP1Q9UEE9 299 aaPredicted RBP3.31□□□□□ -1.88
HMGN4-202ENST00000477243 SUSD2Q9UGT4 822 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 PCDHA4Q9UN74 947 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 KCNH4Q9UQ05 1017 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 AKT3Q9Y243 479 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 POLHQ9Y253 713 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 PCDHGB6Q9Y5F9 930 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 PCDHGA9Q9Y5G4 932 aaKnown RBP3.31□□□□□ -1.88
HMGN4-202ENST00000477243 PCDHGA8Q9Y5G5 932 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 PCDHGA7Q9Y5G6 932 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 PCDHGA6Q9Y5G7 932 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 PCDHGA3Q9Y5H0 932 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 PCDHGA2Q9Y5H1 932 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 NOTCH1P46531 2555 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 NCOR1O75376 2440 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 TMEM131LA2VDJ0 1609 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 ADAMTS12P58397 1594 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 LRRK2Q5S007 2527 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 LRRC9Q6ZRR7 1453 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 GPRASP1Q5JY77 1395 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 A0A087X0M5 115 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 A0A1B0GX30 115 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 A0A1W2PNR3 127 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 FSD2A1L4K1 749 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 SYNDIG1LA6NDD5 238 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 TRIM64A6NGJ6 449 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 TRIM64BA6NI03 449 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 SPDYE3A6NKU9 549 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 A6NNZ2 444 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 FAM177BA6PVY3 158 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 B4DLN1 442 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 H3BRJ5 948 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 NFKBIEO00221 500 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 EIF3FO00303 357 aaPredicted RBP3.3□□□□□ -1.88
HMGN4-202ENST00000477243 TRAF5O00463 557 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 GSTA4O15217 222 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 FFAR2O15552 330 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 DTNBO60941 627 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 SKAP2O75563 359 aaPredicted RBP3.3□□□□□ -1.88
HMGN4-202ENST00000477243 GLRX3O76003 335 aaKnown RBP3.3□□□□□ -1.88
HMGN4-202ENST00000477243 TBC1D8O95759 1140 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 S1PR4O95977 384 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 TP53P04637 393 aaPredicted RBP3.3□□□□□ -1.88
HMGN4-202ENST00000477243 THP07101 528 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 GYS1P13807 737 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 GLULP15104 373 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 FOSL1P15407 271 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 KCNA6P17658 529 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 ABCB4P21439 1286 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 TNFSF4P23510 183 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 GRK2P25098 689 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 PEX2P28328 305 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 ADRA1BP35368 520 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 CTSOP43234 321 aaPredicted RBP3.3□□□□□ -1.88
HMGN4-202ENST00000477243 PRIM2P49643 509 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 SCAND1P57086 179 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 SKOR1P84550 965 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 PTPN11Q06124 597 aaPredicted RBP3.3□□□□□ -1.88
HMGN4-202ENST00000477243 PCDH1Q08174 1060 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 PRKG1Q13976 671 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 SPARCL1Q14515 664 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 SKOR2Q2VWA4 1001 aaPredicted RBP3.3□□□□□ -1.88
HMGN4-202ENST00000477243 SLC45A4Q5BKX6 768 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 FAM209BQ5JX69 171 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 WIPI1Q5MNZ9 446 aaPredicted RBP3.3□□□□□ -1.88
HMGN4-202ENST00000477243 CCDC30Q5VVM6 783 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 BROXQ5VW32 411 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 KIAA1614Q5VZ46 1190 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 MAP1SQ66K74 1059 aaPredicted RBP3.3□□□□□ -1.88
HMGN4-202ENST00000477243 LMBRD2Q68DH5 695 aaPredicted RBP3.3□□□□□ -1.88
HMGN4-202ENST00000477243 STYK1Q6J9G0 422 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 LILRA6Q6PI73 481 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 KRT74Q7RTS7 529 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 OVCH2Q7RTZ1 564 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 ERC1Q8IUD2 1116 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 ZC3H7AQ8IWR0 971 aaKnown RBP3.3□□□□□ -1.88
HMGN4-202ENST00000477243 SYTL1Q8IYJ3 562 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 CCAR2Q8N163 923 aaKnown RBP3.3□□□□□ -1.88
HMGN4-202ENST00000477243 ESX1Q8N693 406 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 ZNF713Q8N859 430 aaPredicted RBP3.3□□□□□ -1.88
HMGN4-202ENST00000477243 PANK1Q8TE04 598 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 ADAMTS18Q8TE60 1221 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 CHTF18Q8WVB6 975 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 PHKBQ93100 1093 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 ACSBG1Q96GR2 724 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 TMEM169Q96HH4 297 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 SPATA17Q96L03 361 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 MRGPRX3Q96LB0 322 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 PPP1R16BQ96T49 567 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 BARD1Q99728 777 aaKnown RBP3.3□□□□□ -1.88
HMGN4-202ENST00000477243 TMEM120AQ9BXJ8 343 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 PBX4Q9BYU1 374 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 BTBD1Q9H0C5 482 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 KLHL25Q9H0H3 589 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.3□□□□□ -1.88
HMGN4-202ENST00000477243 BHMT2Q9H2M3 363 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 ELAC1Q9H777 363 aaKnown RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms