RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 CCDC43Q96MW1 224 aaKnown RBP14.23□□□□□ -0.13
CCNL1-216ENST00000475298 FGFBP2Q9BYJ0 223 aa14.23□□□□□ -0.13
CCNL1-216ENST00000475298 JADE2Q9NQC1 790 aa14.23□□□□□ -0.13
CCNL1-216ENST00000475298 TBC1D7Q9P0N9 293 aa14.23□□□□□ -0.13
CCNL1-216ENST00000475298 STIM2Q9P246 746 aa14.23□□□□□ -0.13
CCNL1-216ENST00000475298 TRPC6Q9Y210 931 aa14.23□□□□□ -0.13
CCNL1-216ENST00000475298 QSER1Q2KHR3 1735 aa14.23□□□□□ -0.13
CCNL1-216ENST00000475298 MARCH6O60337 910 aa14.22□□□□□ -0.13
CCNL1-216ENST00000475298 SMNDC1O75940 238 aaKnown RBP eCLIP14.22□□□□□ -0.132e-16■□□□□ 9.6
CCNL1-216ENST00000475298 HLA-DOAP06340 250 aa14.22□□□□□ -0.13
CCNL1-216ENST00000475298 TAL1P17542 331 aaPredicted RBP14.22□□□□□ -0.13
CCNL1-216ENST00000475298 CRKP46108 304 aa14.22□□□□□ -0.13
CCNL1-216ENST00000475298 RPS6KA3P51812 740 aa14.22□□□□□ -0.13
CCNL1-216ENST00000475298 CACNB1Q02641 598 aaPredicted RBP14.22□□□□□ -0.13
CCNL1-216ENST00000475298 PDIA5Q14554 519 aa14.22□□□□□ -0.13
CCNL1-216ENST00000475298 PPP4R3AQ6IN85 833 aa14.22□□□□□ -0.13
CCNL1-216ENST00000475298 TMC4Q7Z404 712 aa14.22□□□□□ -0.13
CCNL1-216ENST00000475298 COL23A1Q86Y22 540 aaPredicted RBP14.22□□□□□ -0.13
CCNL1-216ENST00000475298 CD302Q8IX05 232 aa14.22□□□□□ -0.13
CCNL1-216ENST00000475298 PURBQ96QR8 312 aaKnown RBP14.22□□□□□ -0.13
CCNL1-216ENST00000475298 PPANQ9NQ55 473 aaKnown RBP14.22□□□□□ -0.13
CCNL1-216ENST00000475298 HOMER3Q9NSC5 361 aa14.22□□□□□ -0.13
CCNL1-216ENST00000475298 RGS17Q9UGC6 210 aaPredicted RBP14.22□□□□□ -0.13
CCNL1-216ENST00000475298 SUGT1Q9Y2Z0 365 aa14.22□□□□□ -0.13
CCNL1-216ENST00000475298 ARFGEF1Q9Y6D6 1849 aa14.22□□□□□ -0.13
CCNL1-216ENST00000475298 PVALEFA0A1B0GWK0 134 aa14.22□□□□□ -0.13
CCNL1-216ENST00000475298 DDTLA6NHG4 134 aaPredicted RBP14.22□□□□□ -0.13
CCNL1-216ENST00000475298 ZNF263O14978 683 aa14.22□□□□□ -0.13
CCNL1-216ENST00000475298 DNAJC8O75937 253 aaPredicted RBP14.22□□□□□ -0.13
CCNL1-216ENST00000475298 FAM153BP0C7A2 387 aa14.22□□□□□ -0.13
CCNL1-216ENST00000475298 RAB27AP51159 221 aa14.22□□□□□ -0.13
CCNL1-216ENST00000475298 MYO1EQ12965 1108 aa14.22□□□□□ -0.13
CCNL1-216ENST00000475298 FAM153CQ494X1 144 aa14.22□□□□□ -0.13
CCNL1-216ENST00000475298 VWA3BQ502W6 1294 aa14.22□□□□□ -0.13
CCNL1-216ENST00000475298 ATP6V1G3Q96LB4 118 aa14.22□□□□□ -0.13
CCNL1-216ENST00000475298 ERGIC2Q96RQ1 377 aa14.22□□□□□ -0.13
CCNL1-216ENST00000475298 RAB34Q9BZG1 259 aa14.22□□□□□ -0.13
CCNL1-216ENST00000475298 NDST4Q9H3R1 872 aa14.22□□□□□ -0.13
CCNL1-216ENST00000475298 ZNHIT6Q9NWK9 470 aaKnown RBP14.22□□□□□ -0.13
CCNL1-216ENST00000475298 ZNF219Q9P2Y4 722 aaPredicted RBP14.22□□□□□ -0.13
CCNL1-216ENST00000475298 FAM153AQ9UHL3 310 aa14.22□□□□□ -0.13
CCNL1-216ENST00000475298 SNX12Q9UMY4 172 aa14.22□□□□□ -0.13
CCNL1-216ENST00000475298 NPHP3-ACAD11A0A0J9YXS1 232 aa14.21□□□□□ -0.13
CCNL1-216ENST00000475298 MACROD2A1Z1Q3 448 aa14.21□□□□□ -0.13
CCNL1-216ENST00000475298 E9PMD0 336 aa14.21□□□□□ -0.13
CCNL1-216ENST00000475298 EEF2P13639 858 aaKnown RBP14.21□□□□□ -0.13
CCNL1-216ENST00000475298 RBBP5Q15291 538 aaKnown RBP14.21□□□□□ -0.13
CCNL1-216ENST00000475298 QRICH1Q2TAL8 776 aa14.21□□□□□ -0.13
CCNL1-216ENST00000475298 COBLL1Q53SF7 1204 aa14.21□□□□□ -0.13
CCNL1-216ENST00000475298 GPATCH4Q5T3I0 446 aaKnown RBP14.21□□□□□ -0.13
CCNL1-216ENST00000475298 MSL1Q68DK7 614 aa14.21□□□□□ -0.13
CCNL1-216ENST00000475298 CAPRIN2Q6IMN6 1127 aaKnown RBP14.21□□□□□ -0.13
CCNL1-216ENST00000475298 EHBP1Q8NDI1 1231 aa14.21□□□□□ -0.13
CCNL1-216ENST00000475298 SIK3Q9Y2K2 1263 aa14.21□□□□□ -0.13
CCNL1-216ENST00000475298 NRXN2Q9P2S2 1712 aa14.21□□□□□ -0.13
CCNL1-216ENST00000475298 BRWD3Q6RI45 1802 aa14.21□□□□□ -0.14
CCNL1-216ENST00000475298 COL11A2P13942 1736 aaPredicted RBP14.21□□□□□ -0.14
CCNL1-216ENST00000475298 GREB1LQ9C091 1923 aaPredicted RBP14.21□□□□□ -0.14
CCNL1-216ENST00000475298 GMNCA6NCL1 334 aa14.2□□□□□ -0.14
CCNL1-216ENST00000475298 KRT86O43790 486 aa14.2□□□□□ -0.14
CCNL1-216ENST00000475298 NPR1P16066 1061 aa14.2□□□□□ -0.14
CCNL1-216ENST00000475298 CYLC1P35663 651 aaPredicted RBP14.2□□□□□ -0.14
CCNL1-216ENST00000475298 STAT3P40763 770 aa14.2□□□□□ -0.14
CCNL1-216ENST00000475298 PPP1R2P41236 205 aa14.2□□□□□ -0.14
CCNL1-216ENST00000475298 RBM5P52756 815 aaKnown RBP eCLIP14.2□□□□□ -0.14
CCNL1-216ENST00000475298 EHHADHQ08426 723 aa14.2□□□□□ -0.14
CCNL1-216ENST00000475298 COASYQ13057 564 aa14.2□□□□□ -0.14
CCNL1-216ENST00000475298 TRAF1Q13077 416 aa14.2□□□□□ -0.14
CCNL1-216ENST00000475298 GLE1Q53GS7 698 aaKnown RBP14.2□□□□□ -0.14
CCNL1-216ENST00000475298 CFAP58Q5T655 872 aa14.2□□□□□ -0.14
CCNL1-216ENST00000475298 PPP1R18Q6NYC8 613 aa14.2□□□□□ -0.14
CCNL1-216ENST00000475298 HHIPL2Q6UWX4 724 aa14.2□□□□□ -0.14
CCNL1-216ENST00000475298 LRRC55Q6ZSA7 311 aa14.2□□□□□ -0.14
CCNL1-216ENST00000475298 KRT27Q7Z3Y8 459 aa14.2□□□□□ -0.14
CCNL1-216ENST00000475298 GUF1Q8N442 669 aaKnown RBP14.2□□□□□ -0.14
CCNL1-216ENST00000475298 RETREG2Q8NC44 543 aa14.2□□□□□ -0.14
CCNL1-216ENST00000475298 C1orf131Q8NDD1 294 aaKnown RBP14.2□□□□□ -0.14
CCNL1-216ENST00000475298 SMCR8Q8TEV9 937 aaPredicted RBP14.2□□□□□ -0.14
CCNL1-216ENST00000475298 DNAJC19Q96DA6 116 aa14.2□□□□□ -0.14
CCNL1-216ENST00000475298 SEC16BQ96JE7 1060 aa14.2□□□□□ -0.14
CCNL1-216ENST00000475298 MMRN2Q9H8L6 949 aa14.2□□□□□ -0.14
CCNL1-216ENST00000475298 SMARCAL1Q9NZC9 954 aa14.2□□□□□ -0.14
CCNL1-216ENST00000475298 CPSF2Q9P2I0 782 aaKnown RBP14.2□□□□□ -0.14
CCNL1-216ENST00000475298 PCDHA12Q9UN75 941 aa14.2□□□□□ -0.14
CCNL1-216ENST00000475298 C15orf41Q9Y2V0 281 aa14.2□□□□□ -0.14
CCNL1-216ENST00000475298 SIPA1L1O43166 1804 aa14.2□□□□□ -0.14
CCNL1-216ENST00000475298 CDC25CP30307 473 aa14.2□□□□□ -0.14
CCNL1-216ENST00000475298 KRT83P78385 493 aa14.2□□□□□ -0.14
CCNL1-216ENST00000475298 SLC5A9Q2M3M2 681 aa14.2□□□□□ -0.14
CCNL1-216ENST00000475298 THEMIS2Q5TEJ8 643 aa14.2□□□□□ -0.14
CCNL1-216ENST00000475298 SH3BP5LQ7L8J4 393 aa14.2□□□□□ -0.14
CCNL1-216ENST00000475298 C2CD5Q86YS7 1000 aa14.2□□□□□ -0.14
CCNL1-216ENST00000475298 C3orf20Q8ND61 904 aa14.2□□□□□ -0.14
CCNL1-216ENST00000475298 MTMR8Q96EF0 704 aa14.2□□□□□ -0.14
CCNL1-216ENST00000475298 P2RX7Q99572 595 aaKnown RBP14.2□□□□□ -0.14
CCNL1-216ENST00000475298 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.2□□□□□ -0.14
CCNL1-216ENST00000475298 ATF5Q9Y2D1 282 aaPredicted RBP14.2□□□□□ -0.14
CCNL1-216ENST00000475298 POTEB3A0JP26 581 aa14.19□□□□□ -0.14
CCNL1-216ENST00000475298 POTECB2RU33 542 aa14.19□□□□□ -0.14
CCNL1-216ENST00000475298 TRAPPC3O43617 180 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms