RNA–Protein interactions for RNA: ENST00000471440.6

CFHR3-205, Transcript of complement factor H related 3, humanhuman

TSL 1 (best) BASIC

Gene CFHR3, Length 1,965 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-205ENST00000471440 COL14A1Q05707 1796 aaKnown RBP5.56□□□□□ -1.52
CFHR3-205ENST00000471440 INSRP06213 1382 aa5.56□□□□□ -1.52
CFHR3-205ENST00000471440 FLT4P35916 1363 aa5.56□□□□□ -1.52
CFHR3-205ENST00000471440 ABCA3Q99758 1704 aa5.55□□□□□ -1.52
CFHR3-205ENST00000471440 SLIT2O94813 1529 aa5.55□□□□□ -1.52
CFHR3-205ENST00000471440 AFF2P51816 1311 aa5.55□□□□□ -1.52
CFHR3-205ENST00000471440 A6NNZ2 444 aa5.55□□□□□ -1.52
CFHR3-205ENST00000471440 RGS13O14921 159 aa5.55□□□□□ -1.52
CFHR3-205ENST00000471440 CYP26A1O43174 497 aa5.55□□□□□ -1.52
CFHR3-205ENST00000471440 PCDHGA12O60330 932 aa5.55□□□□□ -1.52
CFHR3-205ENST00000471440 GLRX3O76003 335 aaKnown RBP5.55□□□□□ -1.52
CFHR3-205ENST00000471440 LRIG2O94898 1065 aa5.55□□□□□ -1.52
CFHR3-205ENST00000471440 MED26O95402 600 aa5.55□□□□□ -1.52
CFHR3-205ENST00000471440 NBPF7P0C2Y1 421 aaPredicted RBP5.55□□□□□ -1.52
CFHR3-205ENST00000471440 PDE4BQ07343 736 aa5.55□□□□□ -1.52
CFHR3-205ENST00000471440 PICALMQ13492 652 aa5.55□□□□□ -1.52
CFHR3-205ENST00000471440 CNGB1Q14028 1251 aaPredicted RBP5.55□□□□□ -1.52
CFHR3-205ENST00000471440 BBS9Q3SYG4 887 aa5.55□□□□□ -1.52
CFHR3-205ENST00000471440 CYP27C1Q4G0S4 372 aa5.55□□□□□ -1.52
CFHR3-205ENST00000471440 XRRA1Q6P2D8 792 aa5.55□□□□□ -1.52
CFHR3-205ENST00000471440 MCATQ8IVS2 390 aaKnown RBP5.55□□□□□ -1.52
CFHR3-205ENST00000471440 PTPRN2Q92932 1015 aa5.55□□□□□ -1.52
CFHR3-205ENST00000471440 CFAP53Q96M91 514 aa5.55□□□□□ -1.52
CFHR3-205ENST00000471440 ORAI3Q9BRQ5 295 aa5.55□□□□□ -1.52
CFHR3-205ENST00000471440 MENTQ9BUN1 341 aa5.55□□□□□ -1.52
CFHR3-205ENST00000471440 SLC13A1Q9BZW2 595 aa5.55□□□□□ -1.52
CFHR3-205ENST00000471440 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.55□□□□□ -1.52
CFHR3-205ENST00000471440 EMC7Q9NPA0 242 aa5.55□□□□□ -1.52
CFHR3-205ENST00000471440 ADAM30Q9UKF2 790 aa5.55□□□□□ -1.52
CFHR3-205ENST00000471440 TRPC5Q9UL62 973 aaPredicted RBP5.55□□□□□ -1.52
CFHR3-205ENST00000471440 PCDHGA9Q9Y5G4 932 aaKnown RBP5.55□□□□□ -1.52
CFHR3-205ENST00000471440 PCDHGA8Q9Y5G5 932 aa5.55□□□□□ -1.52
CFHR3-205ENST00000471440 PCDHGA7Q9Y5G6 932 aa5.55□□□□□ -1.52
CFHR3-205ENST00000471440 PCDHGA6Q9Y5G7 932 aa5.55□□□□□ -1.52
CFHR3-205ENST00000471440 PCDHGA3Q9Y5H0 932 aa5.55□□□□□ -1.52
CFHR3-205ENST00000471440 PCDHGA2Q9Y5H1 932 aa5.55□□□□□ -1.52
CFHR3-205ENST00000471440 MYBBP1AQ9BQG0 1328 aaKnown RBP5.55□□□□□ -1.52
CFHR3-205ENST00000471440 PMM2O15305 246 aa5.55□□□□□ -1.52
CFHR3-205ENST00000471440 NBNO60934 754 aa5.55□□□□□ -1.52
CFHR3-205ENST00000471440 SOD2P04179 222 aa5.55□□□□□ -1.52
CFHR3-205ENST00000471440 USP14P54578 494 aa5.55□□□□□ -1.52
CFHR3-205ENST00000471440 ZNF280AP59817 542 aaPredicted RBP5.55□□□□□ -1.52
CFHR3-205ENST00000471440 HTRA3P83110 453 aa5.55□□□□□ -1.52
CFHR3-205ENST00000471440 SAFBQ15424 915 aaKnown RBP eCLIP5.55□□□□□ -1.52
CFHR3-205ENST00000471440 MINDY4Q4G0A6 757 aa5.55□□□□□ -1.52
CFHR3-205ENST00000471440 PRAMEF13Q5VWM6 474 aa5.55□□□□□ -1.52
CFHR3-205ENST00000471440 TMEM145Q8NBT3 493 aa5.55□□□□□ -1.52
CFHR3-205ENST00000471440 FAM13CQ8NE31 585 aa5.55□□□□□ -1.52
CFHR3-205ENST00000471440 XAGE3Q8WTP9 111 aa5.55□□□□□ -1.52
CFHR3-205ENST00000471440 WNK4Q96J92 1243 aa5.55□□□□□ -1.52
CFHR3-205ENST00000471440 DDX21Q9NR30 783 aaKnown RBP eCLIP5.55□□□□□ -1.52
CFHR3-205ENST00000471440 SPTLC3Q9NUV7 552 aa5.55□□□□□ -1.52
CFHR3-205ENST00000471440 NRBP1Q9UHY1 535 aa5.55□□□□□ -1.52
CFHR3-205ENST00000471440 EMC9Q9Y3B6 208 aa5.55□□□□□ -1.52
CFHR3-205ENST00000471440 SMG6Q86US8 1419 aaKnown RBP5.55□□□□□ -1.52
CFHR3-205ENST00000471440 CAMTA1Q9Y6Y1 1673 aa5.54□□□□□ -1.52
CFHR3-205ENST00000471440 BCL9LQ86UU0 1499 aa5.54□□□□□ -1.52
CFHR3-205ENST00000471440 WDR17Q8IZU2 1322 aa5.54□□□□□ -1.52
CFHR3-205ENST00000471440 RASSF10A6NK89 507 aa5.54□□□□□ -1.52
CFHR3-205ENST00000471440 ZRANB2O95218 330 aaKnown RBP eCLIP5.54□□□□□ -1.52
CFHR3-205ENST00000471440 FKBP9O95302 570 aa5.54□□□□□ -1.52
CFHR3-205ENST00000471440 GFRA1P56159 465 aa5.54□□□□□ -1.52
CFHR3-205ENST00000471440 TUBB8Q3ZCM7 444 aa5.54□□□□□ -1.52
CFHR3-205ENST00000471440 IQSEC1Q6DN90 963 aa5.54□□□□□ -1.52
CFHR3-205ENST00000471440 B3GNT9Q6UX72 402 aa5.54□□□□□ -1.52
CFHR3-205ENST00000471440 FKBP9P1Q75LS8 142 aa5.54□□□□□ -1.52
CFHR3-205ENST00000471440 TRIM59Q8IWR1 403 aa5.54□□□□□ -1.52
CFHR3-205ENST00000471440 PHACTR4Q8IZ21 702 aa5.54□□□□□ -1.52
CFHR3-205ENST00000471440 FAM181AQ8N9Y4 354 aa5.54□□□□□ -1.52
CFHR3-205ENST00000471440 CLRN3Q8NCR9 226 aa5.54□□□□□ -1.52
CFHR3-205ENST00000471440 OR2W6PQ8NHA6 318 aa5.54□□□□□ -1.52
CFHR3-205ENST00000471440 BAHD1Q8TBE0 780 aaPredicted RBP5.54□□□□□ -1.52
CFHR3-205ENST00000471440 CLIP3Q96DZ5 547 aa5.54□□□□□ -1.52
CFHR3-205ENST00000471440 KRTAP17-1Q9BYP8 105 aa5.54□□□□□ -1.52
CFHR3-205ENST00000471440 FOXQ1Q9C009 403 aa5.54□□□□□ -1.52
CFHR3-205ENST00000471440 PUF60Q9UHX1 559 aaKnown RBP5.54□□□□□ -1.52
CFHR3-205ENST00000471440 PHTF1Q9UMS5 762 aa5.54□□□□□ -1.52
CFHR3-205ENST00000471440 RNF114Q9Y508 228 aa5.54□□□□□ -1.52
CFHR3-205ENST00000471440 IPPQ9Y573 584 aa5.54□□□□□ -1.52
CFHR3-205ENST00000471440 U3KQE9 123 aa5.54□□□□□ -1.52
CFHR3-205ENST00000471440 NWD2Q9ULI1 1742 aa5.54□□□□□ -1.52
CFHR3-205ENST00000471440 MAP2P11137 1827 aaKnown RBP5.53□□□□□ -1.52
CFHR3-205ENST00000471440 LMO7Q8WWI1 1683 aa5.53□□□□□ -1.52
CFHR3-205ENST00000471440 ANO9A1A5B4 782 aa5.53□□□□□ -1.52
CFHR3-205ENST00000471440 CFAP69A5D8W1 941 aa5.53□□□□□ -1.52
CFHR3-205ENST00000471440 HMGB1P1B2RPK0 211 aaPredicted RBP5.53□□□□□ -1.52
CFHR3-205ENST00000471440 TRAF5O00463 557 aa5.53□□□□□ -1.52
CFHR3-205ENST00000471440 EFCAB14O75071 495 aa5.53□□□□□ -1.52
CFHR3-205ENST00000471440 CT47B1P0C2W7 299 aaPredicted RBP5.53□□□□□ -1.52
CFHR3-205ENST00000471440 CAP2P40123 477 aa5.53□□□□□ -1.52
CFHR3-205ENST00000471440 SCNN1BP51168 640 aa5.53□□□□□ -1.52
CFHR3-205ENST00000471440 MSMPQ1L6U9 139 aa5.53□□□□□ -1.52
CFHR3-205ENST00000471440 INTS5Q6P9B9 1019 aaKnown RBP5.53□□□□□ -1.52
CFHR3-205ENST00000471440 KCNT2Q6UVM3 1135 aa5.53□□□□□ -1.52
CFHR3-205ENST00000471440 TOGARAM2Q6ZUX3 1019 aa5.53□□□□□ -1.52
CFHR3-205ENST00000471440 TOM1L2Q6ZVM7 507 aa5.53□□□□□ -1.52
CFHR3-205ENST00000471440 MRPL41Q8IXM3 137 aaKnown RBP5.53□□□□□ -1.52
CFHR3-205ENST00000471440 FAM9BQ8IZU0 186 aa5.53□□□□□ -1.52
CFHR3-205ENST00000471440 C1orf162Q8NEQ5 155 aaPredicted RBP5.53□□□□□ -1.52
CFHR3-205ENST00000471440 TMEM87BQ96K49 555 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms