RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 TPP1O14773 563 aa5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 SLC27A2O14975 620 aa5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 BUB1BO60566 1050 aaPredicted RBP5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 NDUFS2O75306 463 aa5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 TADA3O75528 432 aa5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 DGKIO75912 1065 aa5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 EFEMP2O95967 443 aa5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 SDHAP31040 664 aa5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 CYP27A1Q02318 531 aa5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 KIR3DS1Q14943 382 aa5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 ZBTB41Q5SVQ8 909 aa5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 DUSP27Q5VZP5 1158 aa5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 CD163Q86VB7 1156 aa5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 FAM9AQ8IZU1 332 aaPredicted RBP5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 CLEC4DQ8WXI8 215 aa5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 GJA10Q969M2 543 aa5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 TTC17Q96AE7 1141 aa5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 FOXRED1Q96CU9 486 aaPredicted RBP5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 ACAP3Q96P50 834 aa5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 MAF1Q9H063 256 aa5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 RNF38Q9H0F5 515 aa5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 KLHL11Q9NVR0 708 aa5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 BSDC1Q9NW68 430 aaPredicted RBP5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 EDARQ9UNE0 448 aa5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 PPP2R3BQ9Y5P8 575 aa5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 ATP23Q9Y6H3 246 aa5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 NOTOA8MTQ0 251 aa5.33□□□□□ -1.56
HMGN3P1-201ENST00000453847 ACOT7O00154 380 aa5.33□□□□□ -1.56
HMGN3P1-201ENST00000453847 OFD1O75665 1012 aa5.33□□□□□ -1.56
HMGN3P1-201ENST00000453847 HRGP04196 525 aa5.33□□□□□ -1.56
HMGN3P1-201ENST00000453847 PDCP20941 246 aa5.33□□□□□ -1.56
HMGN3P1-201ENST00000453847 ENDOUP21128 410 aaKnown RBP5.33□□□□□ -1.56
HMGN3P1-201ENST00000453847 EDNRBP24530 442 aa5.33□□□□□ -1.56
HMGN3P1-201ENST00000453847 THBS2P35442 1172 aa5.33□□□□□ -1.56
HMGN3P1-201ENST00000453847 MVKQ03426 396 aa5.33□□□□□ -1.56
HMGN3P1-201ENST00000453847 EMC4Q5J8M3 183 aa5.33□□□□□ -1.56
HMGN3P1-201ENST00000453847 PRR23CQ6ZRP0 262 aa5.33□□□□□ -1.56
HMGN3P1-201ENST00000453847 TTLL7Q6ZT98 887 aa5.33□□□□□ -1.56
HMGN3P1-201ENST00000453847 KCTD1Q719H9 257 aa5.33□□□□□ -1.56
HMGN3P1-201ENST00000453847 FAM156AQ8NDB6 213 aa5.33□□□□□ -1.56
HMGN3P1-201ENST00000453847 COA7Q96BR5 231 aa5.33□□□□□ -1.56
HMGN3P1-201ENST00000453847 ASIC4Q96FT7 647 aa5.33□□□□□ -1.56
HMGN3P1-201ENST00000453847 MAP6Q96JE9 813 aa5.33□□□□□ -1.56
HMGN3P1-201ENST00000453847 LRFN3Q9BTN0 628 aa5.33□□□□□ -1.56
HMGN3P1-201ENST00000453847 PDGFDQ9GZP0 370 aaPredicted RBP5.33□□□□□ -1.56
HMGN3P1-201ENST00000453847 TNFRSF10DQ9UBN6 386 aa5.33□□□□□ -1.56
HMGN3P1-201ENST00000453847 SNX11Q9Y5W9 270 aa5.33□□□□□ -1.56
HMGN3P1-201ENST00000453847 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 HIP1RO75146 1068 aa5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 TUSC2O75896 110 aa5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 ZBED1O96006 694 aa5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 LPLP06858 475 aa5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 MYL3P08590 195 aa5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 PTPN1P18031 435 aaKnown RBP5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 GJA9P57773 515 aa5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 ALDH6A1Q02252 535 aaKnown RBP5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 ADCY1Q08828 1119 aa5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 NFIAQ12857 509 aa5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 TUSC3Q13454 348 aa5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 UGT8Q16880 541 aa5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 GRAMD1BQ3KR37 738 aa5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 MROH9Q5TGP6 573 aa5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 RTN4RL1Q86UN2 441 aaPredicted RBP5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 COL23A1Q86Y22 540 aaPredicted RBP5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 SLC41A1Q8IVJ1 513 aa5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 ZZZ3Q8IYH5 903 aa5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 KIAA0319LQ8IZA0 1049 aa5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 NLGN4XQ8N0W4 816 aa5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 PPM1NQ8N819 430 aa5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 SHKBP1Q8TBC3 707 aa5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 TSPEARQ8WU66 669 aa5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 CSRNP2Q9H175 543 aa5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 BHMT2Q9H2M3 363 aa5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 LRRC4CQ9HCJ2 640 aa5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 PUF60Q9UHX1 559 aaKnown RBP5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 A0A1W2PQ45 241 aaPredicted RBP5.31□□□□□ -1.56
HMGN3P1-201ENST00000453847 A0A1W2PQY0 241 aa5.31□□□□□ -1.56
HMGN3P1-201ENST00000453847 C1QTNF9BB2RNN3 333 aa5.31□□□□□ -1.56
HMGN3P1-201ENST00000453847 FOSP01100 380 aaPredicted RBP5.31□□□□□ -1.56
HMGN3P1-201ENST00000453847 NTRK1P04629 796 aa5.31□□□□□ -1.56
HMGN3P1-201ENST00000453847 TRAPPC10P48553 1259 aa5.31□□□□□ -1.56
HMGN3P1-201ENST00000453847 FNTBP49356 437 aa5.31□□□□□ -1.56
HMGN3P1-201ENST00000453847 KIF23Q02241 960 aaPredicted RBP5.31□□□□□ -1.56
HMGN3P1-201ENST00000453847 TRIM25Q14258 630 aaKnown RBP5.31□□□□□ -1.56
HMGN3P1-201ENST00000453847 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.31□□□□□ -1.56
HMGN3P1-201ENST00000453847 MUM1Q2TAK8 710 aa5.31□□□□□ -1.56
HMGN3P1-201ENST00000453847 TMEM95Q3KNT9 176 aa5.31□□□□□ -1.56
HMGN3P1-201ENST00000453847 PLA2G4EQ3MJ16 856 aa5.31□□□□□ -1.56
HMGN3P1-201ENST00000453847 BTBD8Q5XKL5 378 aa5.31□□□□□ -1.56
HMGN3P1-201ENST00000453847 STEAP3Q658P3 488 aa5.31□□□□□ -1.56
HMGN3P1-201ENST00000453847 XRRA1Q6P2D8 792 aa5.31□□□□□ -1.56
HMGN3P1-201ENST00000453847 CCDC62Q6P9F0 684 aa5.31□□□□□ -1.56
HMGN3P1-201ENST00000453847 UNQ6494/PRO21346Q6UXR6 183 aa5.31□□□□□ -1.56
HMGN3P1-201ENST00000453847 USP45Q70EL2 814 aa5.31□□□□□ -1.56
HMGN3P1-201ENST00000453847 GRAMD1CQ8IYS0 662 aa5.31□□□□□ -1.56
HMGN3P1-201ENST00000453847 MIER2Q8N344 545 aa5.31□□□□□ -1.56
HMGN3P1-201ENST00000453847 LZTR1Q8N653 840 aa5.31□□□□□ -1.56
HMGN3P1-201ENST00000453847 SSH1Q8WYL5 1049 aa5.31□□□□□ -1.56
HMGN3P1-201ENST00000453847 TP53INP1Q96A56 240 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms