RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 LMAN1P49257 510 aa11.43□□□□□ -0.58
CD44-210ENST00000434472 PRELPP51888 382 aa11.43□□□□□ -0.58
CD44-210ENST00000434472 PPP2R5CQ13362 524 aa11.43□□□□□ -0.58
CD44-210ENST00000434472 AOC3Q16853 763 aa11.43□□□□□ -0.58
CD44-210ENST00000434472 VPS36Q86VN1 386 aa11.43□□□□□ -0.58
CD44-210ENST00000434472 AENQ8WTP8 325 aaKnown RBP11.43□□□□□ -0.58
CD44-210ENST00000434472 FAM151AQ8WW52 585 aa11.43□□□□□ -0.58
CD44-210ENST00000434472 TAF4BQ92750 862 aa11.43□□□□□ -0.58
CD44-210ENST00000434472 SLC5A5Q92911 643 aa11.43□□□□□ -0.58
CD44-210ENST00000434472 UIMC1Q96RL1 719 aa11.43□□□□□ -0.58
CD44-210ENST00000434472 SELENOOQ9BVL4 669 aa11.43□□□□□ -0.58
CD44-210ENST00000434472 WDR11Q9BZH6 1224 aa11.43□□□□□ -0.58
CD44-210ENST00000434472 BHMT2Q9H2M3 363 aa11.43□□□□□ -0.58
CD44-210ENST00000434472 RNF216Q9NWF9 866 aaPredicted RBP11.43□□□□□ -0.58
CD44-210ENST00000434472 KCND2Q9NZV8 630 aa11.43□□□□□ -0.58
CD44-210ENST00000434472 FAN1Q9Y2M0 1017 aa11.43□□□□□ -0.58
CD44-210ENST00000434472 PCDHGC5Q9Y5F6 944 aa11.43□□□□□ -0.58
CD44-210ENST00000434472 A0A1W2PRG0 241 aa11.42□□□□□ -0.58
CD44-210ENST00000434472 BUB1O43683 1085 aa11.42□□□□□ -0.58
CD44-210ENST00000434472 GCNT3O95395 438 aa11.42□□□□□ -0.58
CD44-210ENST00000434472 ERCC3P19447 782 aa11.42□□□□□ -0.58
CD44-210ENST00000434472 HOXA13P31271 388 aaPredicted RBP11.42□□□□□ -0.58
CD44-210ENST00000434472 CASP5P51878 434 aa11.42□□□□□ -0.58
CD44-210ENST00000434472 EPHB4P54760 987 aa11.42□□□□□ -0.58
CD44-210ENST00000434472 SETQ01105 290 aaPredicted RBP11.42□□□□□ -0.58
CD44-210ENST00000434472 NNTQ13423 1086 aa11.42□□□□□ -0.58
CD44-210ENST00000434472 EPHA7Q15375 998 aa11.42□□□□□ -0.58
CD44-210ENST00000434472 MEI1Q5TIA1 1274 aa11.42□□□□□ -0.58
CD44-210ENST00000434472 LRCH2Q5VUJ6 765 aa11.42□□□□□ -0.58
CD44-210ENST00000434472 RINT1Q6NUQ1 792 aa11.42□□□□□ -0.58
CD44-210ENST00000434472 C8orf74Q6P047 294 aa11.42□□□□□ -0.58
CD44-210ENST00000434472 EMBQ6PCB8 327 aa11.42□□□□□ -0.58
CD44-210ENST00000434472 LEKR1Q6ZMV7 388 aa11.42□□□□□ -0.58
CD44-210ENST00000434472 ANKRD13CQ8N6S4 541 aa11.42□□□□□ -0.58
CD44-210ENST00000434472 FAM133AQ8N9E0 248 aa11.42□□□□□ -0.58
CD44-210ENST00000434472 NEK9Q8TD19 979 aa11.42□□□□□ -0.58
CD44-210ENST00000434472 LMBR1Q8WVP7 490 aa11.42□□□□□ -0.58
CD44-210ENST00000434472 C7orf43Q8WVR3 580 aa11.42□□□□□ -0.58
CD44-210ENST00000434472 PRMT6Q96LA8 375 aaPredicted RBP11.42□□□□□ -0.58
CD44-210ENST00000434472 NACC1Q96RE7 527 aa11.42□□□□□ -0.58
CD44-210ENST00000434472 HSD17B14Q9BPX1 270 aa11.42□□□□□ -0.58
CD44-210ENST00000434472 MKNK1Q9BUB5 465 aa11.42□□□□□ -0.58
CD44-210ENST00000434472 RANBP17Q9H2T7 1088 aaKnown RBP11.42□□□□□ -0.58
CD44-210ENST00000434472 PPIP5K2O43314 1243 aa11.42□□□□□ -0.58
CD44-210ENST00000434472 PALMO75781 387 aa11.42□□□□□ -0.58
CD44-210ENST00000434472 PSMD10O75832 226 aa11.42□□□□□ -0.58
CD44-210ENST00000434472 UCHL3P15374 230 aa11.42□□□□□ -0.58
CD44-210ENST00000434472 FERP16591 822 aa11.42□□□□□ -0.58
CD44-210ENST00000434472 PON1P27169 355 aa11.42□□□□□ -0.58
CD44-210ENST00000434472 HOXD13P35453 343 aa11.42□□□□□ -0.58
CD44-210ENST00000434472 ACTN2P35609 894 aa11.42□□□□□ -0.58
CD44-210ENST00000434472 PSMC2P35998 433 aaKnown RBP11.42□□□□□ -0.58
CD44-210ENST00000434472 JAG1P78504 1218 aa11.42□□□□□ -0.58
CD44-210ENST00000434472 KIAA0753Q2KHM9 967 aa11.42□□□□□ -0.58
CD44-210ENST00000434472 MSL1Q68DK7 614 aa11.42□□□□□ -0.58
CD44-210ENST00000434472 DPY19L2P1Q6NXN4 242 aa11.42□□□□□ -0.58
CD44-210ENST00000434472 OTOP1Q7RTM1 612 aa11.42□□□□□ -0.58
CD44-210ENST00000434472 IFT20Q8IY31 132 aa11.42□□□□□ -0.58
CD44-210ENST00000434472 AFAP1L1Q8TED9 768 aa11.42□□□□□ -0.58
CD44-210ENST00000434472 DYDC2Q96IM9 177 aa11.42□□□□□ -0.58
CD44-210ENST00000434472 LRRC1Q9BTT6 524 aa11.42□□□□□ -0.58
CD44-210ENST00000434472 RUSC1Q9BVN2 902 aa11.42□□□□□ -0.58
CD44-210ENST00000434472 STIM2Q9P246 746 aa11.42□□□□□ -0.58
CD44-210ENST00000434472 SALL4Q9UJQ4 1053 aa11.42□□□□□ -0.58
CD44-210ENST00000434472 INTUQ9ULD6 942 aa11.42□□□□□ -0.58
CD44-210ENST00000434472 ODF2LQ9ULJ1 636 aa11.42□□□□□ -0.58
CD44-210ENST00000434472 ASTN1O14525 1302 aa11.42□□□□□ -0.58
CD44-210ENST00000434472 SCN9AQ15858 1988 aa11.41□□□□□ -0.58
CD44-210ENST00000434472 A0A087X0T9 212 aa11.41□□□□□ -0.58
CD44-210ENST00000434472 SPDYE2BA6NHP3 402 aa11.41□□□□□ -0.58
CD44-210ENST00000434472 EML1O00423 815 aa11.41□□□□□ -0.58
CD44-210ENST00000434472 NCK2O43639 380 aa11.41□□□□□ -0.58
CD44-210ENST00000434472 OPA1O60313 960 aa11.41□□□□□ -0.58
CD44-210ENST00000434472 TBC1D12O60347 775 aa11.41□□□□□ -0.58
CD44-210ENST00000434472 N4BP1O75113 896 aaKnown RBP11.41□□□□□ -0.58
CD44-210ENST00000434472 RNF40O75150 1001 aa11.41□□□□□ -0.58
CD44-210ENST00000434472 RPS6KA5O75582 802 aa11.41□□□□□ -0.58
CD44-210ENST00000434472 FLOT1O75955 427 aa11.41□□□□□ -0.58
CD44-210ENST00000434472 AKAP3O75969 853 aa11.41□□□□□ -0.58
CD44-210ENST00000434472 CFBP00751 764 aa11.41□□□□□ -0.58
CD44-210ENST00000434472 IVLP07476 585 aa11.41□□□□□ -0.58
CD44-210ENST00000434472 FAM228BP0C875 321 aa11.41□□□□□ -0.58
CD44-210ENST00000434472 SPDYE6P0CI01 402 aa11.41□□□□□ -0.58
CD44-210ENST00000434472 SLC9A1P19634 815 aa11.41□□□□□ -0.58
CD44-210ENST00000434472 KLRC1P26715 233 aa11.41□□□□□ -0.58
CD44-210ENST00000434472 CYP4A11Q02928 519 aa11.41□□□□□ -0.58
CD44-210ENST00000434472 SF3B2Q13435 895 aaKnown RBP11.41□□□□□ -0.58
CD44-210ENST00000434472 RRP1BQ14684 758 aaKnown RBP11.41□□□□□ -0.58
CD44-210ENST00000434472 DLGAP5Q15398 846 aa11.41□□□□□ -0.58
CD44-210ENST00000434472 DCAF17Q5H9S7 520 aaPredicted RBP11.41□□□□□ -0.58
CD44-210ENST00000434472 FKBP1CQ5VVH2 108 aa11.41□□□□□ -0.58
CD44-210ENST00000434472 RSBN1LQ6PCB5 846 aaPredicted RBP11.41□□□□□ -0.58
CD44-210ENST00000434472 C1orf186Q6ZWK4 172 aa11.41□□□□□ -0.58
CD44-210ENST00000434472 IRF2BP2Q7Z5L9 587 aa11.41□□□□□ -0.58
CD44-210ENST00000434472 MYCT1Q8N699 235 aa11.41□□□□□ -0.58
CD44-210ENST00000434472 CAVIN3Q969G5 261 aa11.41□□□□□ -0.58
CD44-210ENST00000434472 PBKQ96KB5 322 aa11.41□□□□□ -0.58
CD44-210ENST00000434472 TEKT3Q9BXF9 490 aa11.41□□□□□ -0.58
CD44-210ENST00000434472 PARVGQ9HBI0 331 aa11.41□□□□□ -0.58
CD44-210ENST00000434472 ZNF219Q9P2Y4 722 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms