RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 KCTD10Q9H3F6 313 aa16.84■□□□□ 0.29
ACTB-204ENST00000425660 SEL1LQ9UBV2 794 aa16.84■□□□□ 0.29
ACTB-204ENST00000425660 ITIH6Q6UXX5 1313 aa16.84■□□□□ 0.29
ACTB-204ENST00000425660 ARHGEF35A5YM69 484 aa16.84■□□□□ 0.29
ACTB-204ENST00000425660 YWHABP31946 246 aaKnown RBP16.84■□□□□ 0.29
ACTB-204ENST00000425660 UGCGQ16739 394 aa16.84■□□□□ 0.29
ACTB-204ENST00000425660 SMCR8Q8TEV9 937 aaPredicted RBP16.84■□□□□ 0.29
ACTB-204ENST00000425660 TBC1D7Q9P0N9 293 aa16.84■□□□□ 0.29
ACTB-204ENST00000425660 MAGEC2Q9UBF1 373 aaPredicted RBP16.84■□□□□ 0.29
ACTB-204ENST00000425660 SLC9A2Q9UBY0 812 aa16.84■□□□□ 0.29
ACTB-204ENST00000425660 B4DLN1 442 aa16.83■□□□□ 0.28
ACTB-204ENST00000425660 N4BP3O15049 544 aa16.83■□□□□ 0.28
ACTB-204ENST00000425660 FGFR1OPO95684 399 aaKnown RBP16.83■□□□□ 0.28
ACTB-204ENST00000425660 TGFB3P10600 412 aa16.83■□□□□ 0.28
ACTB-204ENST00000425660 SFPQP23246 707 aaKnown RBP eCLIP16.83■□□□□ 0.28
ACTB-204ENST00000425660 CASP5P51878 434 aa16.83■□□□□ 0.28
ACTB-204ENST00000425660 CCZ1BP86790 482 aa16.83■□□□□ 0.28
ACTB-204ENST00000425660 CCZ1P86791 482 aaPredicted RBP16.83■□□□□ 0.28
ACTB-204ENST00000425660 SP2Q02086 613 aa16.83■□□□□ 0.28
ACTB-204ENST00000425660 KCTD2Q14681 263 aa16.83■□□□□ 0.28
ACTB-204ENST00000425660 PPP4R3CPQ6ZMV5 832 aa16.83■□□□□ 0.28
ACTB-204ENST00000425660 ZC3H3Q8IXZ2 948 aaKnown RBP16.83■□□□□ 0.28
ACTB-204ENST00000425660 GPRC5AQ8NFJ5 357 aa16.83■□□□□ 0.28
ACTB-204ENST00000425660 FIZ1Q96SL8 496 aa16.83■□□□□ 0.28
ACTB-204ENST00000425660 TSG101Q99816 390 aa16.83■□□□□ 0.28
ACTB-204ENST00000425660 ZHX3Q9H4I2 956 aa16.83■□□□□ 0.28
ACTB-204ENST00000425660 PARVGQ9HBI0 331 aa16.83■□□□□ 0.28
ACTB-204ENST00000425660 ANKEF1Q9NU02 776 aa16.83■□□□□ 0.28
ACTB-204ENST00000425660 PYCARDQ9ULZ3 195 aa16.83■□□□□ 0.28
ACTB-204ENST00000425660 LGALS16A8MUM7 142 aa16.82■□□□□ 0.28
ACTB-204ENST00000425660 GCLCP48506 637 aaPredicted RBP16.82■□□□□ 0.28
ACTB-204ENST00000425660 FKBP3Q00688 224 aaKnown RBP16.82■□□□□ 0.28
ACTB-204ENST00000425660 MAPK7Q13164 816 aa16.82■□□□□ 0.28
ACTB-204ENST00000425660 PADI6Q6TGC4 694 aa16.82■□□□□ 0.28
ACTB-204ENST00000425660 ABHD15Q6UXT9 468 aa16.82■□□□□ 0.28
ACTB-204ENST00000425660 MORC4Q8TE76 937 aa16.82■□□□□ 0.28
ACTB-204ENST00000425660 CNOT6LQ96LI5 555 aaKnown RBP16.82■□□□□ 0.28
ACTB-204ENST00000425660 MMP19Q99542 508 aa16.82■□□□□ 0.28
ACTB-204ENST00000425660 MPHOSPH6Q99547 160 aaKnown RBP16.82■□□□□ 0.28
ACTB-204ENST00000425660 BCAS3Q9H6U6 928 aa16.82■□□□□ 0.28
ACTB-204ENST00000425660 TAB2Q9NYJ8 693 aa16.82■□□□□ 0.28
ACTB-204ENST00000425660 MORF4L1Q9UBU8 362 aa16.82■□□□□ 0.28
ACTB-204ENST00000425660 KIAA1217Q5T5P2 1943 aa16.82■□□□□ 0.28
ACTB-204ENST00000425660 LRRC37A2A6NM11 1700 aa16.82■□□□□ 0.28
ACTB-204ENST00000425660 KIF3CO14782 793 aa16.82■□□□□ 0.28
ACTB-204ENST00000425660 EIF3DO15371 548 aaKnown RBP eCLIP16.82■□□□□ 0.28
ACTB-204ENST00000425660 DKC1O60832 514 aaKnown RBP eCLIP16.82■□□□□ 0.28
ACTB-204ENST00000425660 FAM13AO94988 1023 aa16.82■□□□□ 0.28
ACTB-204ENST00000425660 ATG7O95352 703 aa16.82■□□□□ 0.28
ACTB-204ENST00000425660 ACTR2P61160 394 aa16.82■□□□□ 0.28
ACTB-204ENST00000425660 CCNA1P78396 465 aa16.82■□□□□ 0.28
ACTB-204ENST00000425660 EDRF1Q3B7T1 1238 aa16.82■□□□□ 0.28
ACTB-204ENST00000425660 CHADLQ6NUI6 762 aa16.82■□□□□ 0.28
ACTB-204ENST00000425660 ZNF507Q8TCN5 953 aa16.82■□□□□ 0.28
ACTB-204ENST00000425660 ATP6V0A1Q93050 837 aa16.82■□□□□ 0.28
ACTB-204ENST00000425660 TUBGCP2Q9BSJ2 902 aa16.82■□□□□ 0.28
ACTB-204ENST00000425660 TIPINQ9BVW5 301 aa16.82■□□□□ 0.28
ACTB-204ENST00000425660 PORCNQ9H237 461 aa16.82■□□□□ 0.28
ACTB-204ENST00000425660 VPS16Q9H269 839 aa16.82■□□□□ 0.28
ACTB-204ENST00000425660 TRAF3IP3Q9Y228 551 aa16.82■□□□□ 0.28
ACTB-204ENST00000425660 PGK2P07205 417 aa16.81■□□□□ 0.28
ACTB-204ENST00000425660 PSAPP07602 524 aa16.81■□□□□ 0.28
ACTB-204ENST00000425660 HOXD13P35453 343 aa16.81■□□□□ 0.28
ACTB-204ENST00000425660 PTPN21Q16825 1174 aa16.81■□□□□ 0.28
ACTB-204ENST00000425660 KNOP1Q1ED39 458 aaKnown RBP16.81■□□□□ 0.28
ACTB-204ENST00000425660 DAW1Q8N136 415 aa16.81■□□□□ 0.28
ACTB-204ENST00000425660 EEF2KMTQ96G04 330 aa16.81■□□□□ 0.28
ACTB-204ENST00000425660 CEP63Q96MT8 703 aa16.81■□□□□ 0.28
ACTB-204ENST00000425660 TMX1Q9H3N1 280 aa16.81■□□□□ 0.28
ACTB-204ENST00000425660 MRPL44Q9H9J2 332 aaKnown RBP16.81■□□□□ 0.28
ACTB-204ENST00000425660 A0A1W2PQC6 194 aa16.8■□□□□ 0.28
ACTB-204ENST00000425660 STBD1O95210 358 aa16.8■□□□□ 0.28
ACTB-204ENST00000425660 SKILP12757 684 aa16.8■□□□□ 0.28
ACTB-204ENST00000425660 MKRN3Q13064 507 aaKnown RBP16.8■□□□□ 0.28
ACTB-204ENST00000425660 ANO5Q75V66 913 aa16.8■□□□□ 0.28
ACTB-204ENST00000425660 ABRAQ8N0Z2 381 aa16.8■□□□□ 0.28
ACTB-204ENST00000425660 ZNF784Q8NCA9 323 aaPredicted RBP16.8■□□□□ 0.28
ACTB-204ENST00000425660 PTPN18Q99952 460 aa16.8■□□□□ 0.28
ACTB-204ENST00000425660 EFCC1Q9HA90 598 aa16.8■□□□□ 0.28
ACTB-204ENST00000425660 SPTLC3Q9NUV7 552 aa16.8■□□□□ 0.28
ACTB-204ENST00000425660 SFI1A8K8P3 1242 aa16.8■□□□□ 0.28
ACTB-204ENST00000425660 PDXKO00764 312 aa16.8■□□□□ 0.28
ACTB-204ENST00000425660 ZNF862O60290 1169 aa16.8■□□□□ 0.28
ACTB-204ENST00000425660 HIP1RO75146 1068 aa16.8■□□□□ 0.28
ACTB-204ENST00000425660 MYBP10242 640 aa16.8■□□□□ 0.28
ACTB-204ENST00000425660 UBA1P22314 1058 aaKnown RBP16.8■□□□□ 0.28
ACTB-204ENST00000425660 MARSP56192 900 aaKnown RBP16.8■□□□□ 0.28
ACTB-204ENST00000425660 MIIPQ5JXC2 388 aa16.8■□□□□ 0.28
ACTB-204ENST00000425660 MIS18BP1Q6P0N0 1132 aa16.8■□□□□ 0.28
ACTB-204ENST00000425660 SEPT14Q6ZU15 432 aa16.8■□□□□ 0.28
ACTB-204ENST00000425660 ZNF720Q7Z2F6 126 aa16.8■□□□□ 0.28
ACTB-204ENST00000425660 NELFCDQ8IXH7 590 aa16.8■□□□□ 0.28
ACTB-204ENST00000425660 MYCT1Q8N699 235 aa16.8■□□□□ 0.28
ACTB-204ENST00000425660 ANKRD13CQ8N6S4 541 aa16.8■□□□□ 0.28
ACTB-204ENST00000425660 PARK7Q99497 189 aaKnown RBP16.8■□□□□ 0.28
ACTB-204ENST00000425660 STRA6Q9BX79 667 aa16.8■□□□□ 0.28
ACTB-204ENST00000425660 GABBR1Q9UBS5 961 aa16.8■□□□□ 0.28
ACTB-204ENST00000425660 UBE4BO95155 1302 aa16.79■□□□□ 0.28
ACTB-204ENST00000425660 SYNGAP1Q96PV0 1343 aa16.79■□□□□ 0.28
ACTB-204ENST00000425660 IGSF9BQ9UPX0 1349 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms