RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 M0QZ92 97 aa20.19■□□□□ 0.82
GPC1-203ENST00000425056 ENPP3O14638 875 aa20.19■□□□□ 0.82
GPC1-203ENST00000425056 CYP3A4P08684 503 aa20.19■□□□□ 0.82
GPC1-203ENST00000425056 ZNF76P36508 570 aa20.19■□□□□ 0.82
GPC1-203ENST00000425056 JAKMIP3Q5VZ66 844 aa20.19■□□□□ 0.82
GPC1-203ENST00000425056 MCTP2Q6DN12 878 aa20.19■□□□□ 0.82
GPC1-203ENST00000425056 BLOC1S2Q6QNY1 142 aa20.19■□□□□ 0.82
GPC1-203ENST00000425056 POTEBQ6S5H4 581 aa20.19■□□□□ 0.82
GPC1-203ENST00000425056 PLA2G4DQ86XP0 818 aa20.19■□□□□ 0.82
GPC1-203ENST00000425056 IGSF9BQ9UPX0 1349 aa20.19■□□□□ 0.82
GPC1-203ENST00000425056 KDM3AQ9Y4C1 1321 aa20.19■□□□□ 0.82
GPC1-203ENST00000425056 SMIM35A0A1B0GVV1 85 aa20.18■□□□□ 0.82
GPC1-203ENST00000425056 DHX15O43143 795 aaKnown RBP20.18■□□□□ 0.82
GPC1-203ENST00000425056 CD52P31358 61 aa20.18■□□□□ 0.82
GPC1-203ENST00000425056 CTNNB1P35222 781 aa20.18■□□□□ 0.82
GPC1-203ENST00000425056 PKN1Q16512 942 aa20.18■□□□□ 0.82
GPC1-203ENST00000425056 LEXMQ3ZCV2 418 aa20.18■□□□□ 0.82
GPC1-203ENST00000425056 ABHD15Q6UXT9 468 aa20.18■□□□□ 0.82
GPC1-203ENST00000425056 CCDC60Q8IWA6 550 aaPredicted RBP20.18■□□□□ 0.82
GPC1-203ENST00000425056 REXO1Q8N1G1 1221 aaKnown RBP20.18■□□□□ 0.82
GPC1-203ENST00000425056 BANK1Q8NDB2 785 aa20.18■□□□□ 0.82
GPC1-203ENST00000425056 CCDC12Q8WUD4 166 aaPredicted RBP20.18■□□□□ 0.82
GPC1-203ENST00000425056 CLP1Q92989 425 aaKnown RBP20.18■□□□□ 0.82
GPC1-203ENST00000425056 ZNF689Q96CS4 500 aaPredicted RBP20.18■□□□□ 0.82
GPC1-203ENST00000425056 FTHL17Q9BXU8 183 aa20.18■□□□□ 0.82
GPC1-203ENST00000425056 RWDD3Q9Y3V2 267 aa20.18■□□□□ 0.82
GPC1-203ENST00000425056 KIAA1671Q9BY89 1806 aa20.18■□□□□ 0.82
GPC1-203ENST00000425056 MYH9P35579 1960 aaKnown RBP20.17■□□□□ 0.82
GPC1-203ENST00000425056 DDX39AO00148 427 aaKnown RBP20.17■□□□□ 0.82
GPC1-203ENST00000425056 IPO5O00410 1097 aaKnown RBP20.17■□□□□ 0.82
GPC1-203ENST00000425056 ADAMTS3O15072 1205 aa20.17■□□□□ 0.82
GPC1-203ENST00000425056 PRPF3O43395 683 aaKnown RBP20.17■□□□□ 0.82
GPC1-203ENST00000425056 RB1P06400 928 aa20.17■□□□□ 0.82
GPC1-203ENST00000425056 RPS6KB1P23443 525 aa20.17■□□□□ 0.82
GPC1-203ENST00000425056 SETQ01105 290 aaPredicted RBP20.17■□□□□ 0.82
GPC1-203ENST00000425056 TMEM62Q0P6H9 643 aa20.17■□□□□ 0.82
GPC1-203ENST00000425056 FAM160B1Q5W0V3 765 aa20.17■□□□□ 0.82
GPC1-203ENST00000425056 MTHFD1LQ6UB35 978 aa20.17■□□□□ 0.82
GPC1-203ENST00000425056 CRIPAKQ8N1N5 446 aa20.17■□□□□ 0.82
GPC1-203ENST00000425056 ATP8B4Q8TF62 1192 aa20.17■□□□□ 0.82
GPC1-203ENST00000425056 C6orf50Q9HD87 102 aa20.17■□□□□ 0.82
GPC1-203ENST00000425056 COL1A2P08123 1366 aa20.17■□□□□ 0.82
GPC1-203ENST00000425056 WDR81Q562E7 1941 aa20.16■□□□□ 0.82
GPC1-203ENST00000425056 BACH1O14867 736 aa20.16■□□□□ 0.82
GPC1-203ENST00000425056 HBP1O60381 514 aa20.16■□□□□ 0.82
GPC1-203ENST00000425056 DGKIO75912 1065 aa20.16■□□□□ 0.82
GPC1-203ENST00000425056 COL9A1P20849 921 aa20.16■□□□□ 0.82
GPC1-203ENST00000425056 KCNA5P22460 613 aa20.16■□□□□ 0.82
GPC1-203ENST00000425056 BMPR1AP36894 532 aa20.16■□□□□ 0.82
GPC1-203ENST00000425056 COL19A1Q14993 1142 aa20.16■□□□□ 0.82
GPC1-203ENST00000425056 NME8Q8N427 588 aa20.16■□□□□ 0.82
GPC1-203ENST00000425056 C11orf84Q9BUA3 381 aaPredicted RBP20.16■□□□□ 0.82
GPC1-203ENST00000425056 CELF4Q9BZC1 486 aaKnown RBP20.16■□□□□ 0.82
GPC1-203ENST00000425056 NSUN3Q9H649 340 aaKnown RBP20.16■□□□□ 0.82
GPC1-203ENST00000425056 PADI3Q9ULW8 664 aa20.16■□□□□ 0.82
GPC1-203ENST00000425056 EVPLQ92817 2033 aa20.15■□□□□ 0.82
GPC1-203ENST00000425056 MYO7AQ13402 2215 aa20.15■□□□□ 0.82
GPC1-203ENST00000425056 REC8O95072 547 aa20.15■□□□□ 0.82
GPC1-203ENST00000425056 GNA11P29992 359 aa20.15■□□□□ 0.82
GPC1-203ENST00000425056 PAK2Q13177 524 aa20.15■□□□□ 0.82
GPC1-203ENST00000425056 NTRK3Q16288 839 aa20.15■□□□□ 0.82
GPC1-203ENST00000425056 TCEAL5Q5H9L2 206 aa20.15■□□□□ 0.82
GPC1-203ENST00000425056 MIS18BP1Q6P0N0 1132 aa20.15■□□□□ 0.82
GPC1-203ENST00000425056 RTN4RL1Q86UN2 441 aaPredicted RBP20.15■□□□□ 0.82
GPC1-203ENST00000425056 NEK9Q8TD19 979 aa20.15■□□□□ 0.82
GPC1-203ENST00000425056 PHKBQ93100 1093 aa20.15■□□□□ 0.82
GPC1-203ENST00000425056 C1QTNF1Q9BXJ1 281 aa20.15■□□□□ 0.82
GPC1-203ENST00000425056 RNF26Q9BY78 433 aaPredicted RBP20.15■□□□□ 0.82
GPC1-203ENST00000425056 LMAN2LQ9H0V9 348 aa20.15■□□□□ 0.82
GPC1-203ENST00000425056 ZNF302Q9NR11 478 aa20.15■□□□□ 0.82
GPC1-203ENST00000425056 KLRC1P26715 233 aa20.14■□□□□ 0.81
GPC1-203ENST00000425056 PSMA5P28066 241 aa20.14■□□□□ 0.81
GPC1-203ENST00000425056 CIITAP33076 1130 aa20.14■□□□□ 0.81
GPC1-203ENST00000425056 EVCP57679 992 aa20.14■□□□□ 0.81
GPC1-203ENST00000425056 KRT76Q01546 638 aa20.14■□□□□ 0.81
GPC1-203ENST00000425056 BTG3Q14201 252 aaPredicted RBP20.14■□□□□ 0.81
GPC1-203ENST00000425056 ZNF746Q6NUN9 644 aaPredicted RBP20.14■□□□□ 0.81
GPC1-203ENST00000425056 PDXDC2PQ6P474 469 aa20.14■□□□□ 0.81
GPC1-203ENST00000425056 NPAS4Q8IUM7 802 aa20.14■□□□□ 0.81
GPC1-203ENST00000425056 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.14■□□□□ 0.81
GPC1-203ENST00000425056 PABPC5Q96DU9 382 aaKnown RBP20.14■□□□□ 0.81
GPC1-203ENST00000425056 CCDC136Q96JN2 1154 aa20.14■□□□□ 0.81
GPC1-203ENST00000425056 ZNF577Q9BSK1 485 aa20.14■□□□□ 0.81
GPC1-203ENST00000425056 TBC1D22BQ9NU19 505 aa20.14■□□□□ 0.81
GPC1-203ENST00000425056 ZBTB42B2RXF5 422 aa20.13■□□□□ 0.81
GPC1-203ENST00000425056 IFNAR1P17181 557 aa20.13■□□□□ 0.81
GPC1-203ENST00000425056 ATP4AP20648 1035 aa20.13■□□□□ 0.81
GPC1-203ENST00000425056 AKAP17AQ02040 695 aaKnown RBP20.13■□□□□ 0.81
GPC1-203ENST00000425056 ZNF484Q5JVG2 852 aa20.13■□□□□ 0.81
GPC1-203ENST00000425056 SWSAP1Q6NVH7 229 aa20.13■□□□□ 0.81
GPC1-203ENST00000425056 FAM43BQ6ZT52 329 aaPredicted RBP20.13■□□□□ 0.81
GPC1-203ENST00000425056 SMAP1Q8IYB5 467 aaPredicted RBP20.13■□□□□ 0.81
GPC1-203ENST00000425056 CMTR2Q8IYT2 770 aaKnown RBP20.13■□□□□ 0.81
GPC1-203ENST00000425056 CCDC148Q8NFR7 591 aa20.13■□□□□ 0.81
GPC1-203ENST00000425056 BICD2Q8TD16 824 aa20.13■□□□□ 0.81
GPC1-203ENST00000425056 PLVAPQ9BX97 442 aa20.13■□□□□ 0.81
GPC1-203ENST00000425056 TMX1Q9H3N1 280 aa20.13■□□□□ 0.81
GPC1-203ENST00000425056 MAFBQ9Y5Q3 323 aaPredicted RBP20.13■□□□□ 0.81
GPC1-203ENST00000425056 GRM6O15303 877 aa20.12■□□□□ 0.81
GPC1-203ENST00000425056 EPB41L2O43491 1005 aaKnown RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms