RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-206ENST00000416651 LMAN2LQ9H0V9 348 aa10.21□□□□□ -0.77
NIF3L1-206ENST00000416651 MRPL42Q9Y6G3 142 aaKnown RBP10.21□□□□□ -0.77
NIF3L1-206ENST00000416651 RAD50Q92878 1312 aa10.21□□□□□ -0.78
NIF3L1-206ENST00000416651 ANP32CO43423 234 aa10.2□□□□□ -0.78
NIF3L1-206ENST00000416651 PPFIA3O75145 1194 aa10.2□□□□□ -0.78
NIF3L1-206ENST00000416651 F2P00734 622 aa10.2□□□□□ -0.78
NIF3L1-206ENST00000416651 RB1P06400 928 aa10.2□□□□□ -0.78
NIF3L1-206ENST00000416651 ASGR2P07307 311 aa10.2□□□□□ -0.78
NIF3L1-206ENST00000416651 CT47B1P0C2W7 299 aaPredicted RBP10.2□□□□□ -0.78
NIF3L1-206ENST00000416651 TSPY3P0CV98 308 aa10.2□□□□□ -0.78
NIF3L1-206ENST00000416651 TSPY8P0CW00 308 aa10.2□□□□□ -0.78
NIF3L1-206ENST00000416651 CASTP20810 708 aaKnown RBP10.2□□□□□ -0.78
NIF3L1-206ENST00000416651 CCDC96Q2M329 555 aa10.2□□□□□ -0.78
NIF3L1-206ENST00000416651 KIAA1217Q5T5P2 1943 aa10.2□□□□□ -0.78
NIF3L1-206ENST00000416651 SYDE2Q5VT97 1194 aa10.2□□□□□ -0.78
NIF3L1-206ENST00000416651 KLHL23Q8NBE8 558 aa10.2□□□□□ -0.78
NIF3L1-206ENST00000416651 LINC01599Q8WXQ3 324 aa10.2□□□□□ -0.78
NIF3L1-206ENST00000416651 SEPT8Q92599 483 aa10.2□□□□□ -0.78
NIF3L1-206ENST00000416651 CLP1Q92989 425 aaKnown RBP10.2□□□□□ -0.78
NIF3L1-206ENST00000416651 ZNF689Q96CS4 500 aaPredicted RBP10.2□□□□□ -0.78
NIF3L1-206ENST00000416651 DDRGK1Q96HY6 314 aa10.2□□□□□ -0.78
NIF3L1-206ENST00000416651 PLIN4Q96Q06 1357 aa10.2□□□□□ -0.78
NIF3L1-206ENST00000416651 HAUS7Q99871 368 aa10.2□□□□□ -0.78
NIF3L1-206ENST00000416651 C11orf84Q9BUA3 381 aaPredicted RBP10.2□□□□□ -0.78
NIF3L1-206ENST00000416651 IRF2BPLQ9H1B7 796 aa10.2□□□□□ -0.78
NIF3L1-206ENST00000416651 DDX41Q9UJV9 622 aaKnown RBP10.2□□□□□ -0.78
NIF3L1-206ENST00000416651 ADGRA3Q8IWK6 1321 aa10.19□□□□□ -0.78
NIF3L1-206ENST00000416651 DGKDQ16760 1214 aa10.19□□□□□ -0.78
NIF3L1-206ENST00000416651 HSDL1Q3SXM5 330 aa10.19□□□□□ -0.78
NIF3L1-206ENST00000416651 PAN2Q504Q3 1202 aaKnown RBP10.19□□□□□ -0.78
NIF3L1-206ENST00000416651 CWF19L1Q69YN2 538 aaKnown RBP10.19□□□□□ -0.78
NIF3L1-206ENST00000416651 DHX37Q8IY37 1157 aaKnown RBP10.19□□□□□ -0.78
NIF3L1-206ENST00000416651 POF1BQ8WVV4 589 aa10.19□□□□□ -0.78
NIF3L1-206ENST00000416651 S1PR5Q9H228 398 aa10.19□□□□□ -0.78
NIF3L1-206ENST00000416651 STX8Q9UNK0 236 aa10.19□□□□□ -0.78
NIF3L1-206ENST00000416651 USP24Q9UPU5 2620 aa10.19□□□□□ -0.78
NIF3L1-206ENST00000416651 FRYLO94915 3013 aa10.18□□□□□ -0.78
NIF3L1-206ENST00000416651 EMSYQ7Z589 1322 aa10.18□□□□□ -0.78
NIF3L1-206ENST00000416651 C2CD4DB7Z1M9 353 aa10.18□□□□□ -0.78
NIF3L1-206ENST00000416651 ENPP3O14638 875 aa10.18□□□□□ -0.78
NIF3L1-206ENST00000416651 IFIT2P09913 472 aaKnown RBP10.18□□□□□ -0.78
NIF3L1-206ENST00000416651 WEE2P0C1S8 567 aa10.18□□□□□ -0.78
NIF3L1-206ENST00000416651 MS4A1P11836 297 aa10.18□□□□□ -0.78
NIF3L1-206ENST00000416651 ATP5JP18859 108 aa10.18□□□□□ -0.78
NIF3L1-206ENST00000416651 TDO2P48775 406 aa10.18□□□□□ -0.78
NIF3L1-206ENST00000416651 SP2Q02086 613 aa10.18□□□□□ -0.78
NIF3L1-206ENST00000416651 CTDSPL2Q05D32 466 aa10.18□□□□□ -0.78
NIF3L1-206ENST00000416651 BTG3Q14201 252 aaPredicted RBP10.18□□□□□ -0.78
NIF3L1-206ENST00000416651 PTPRNQ16849 979 aa10.18□□□□□ -0.78
NIF3L1-206ENST00000416651 USH1GQ495M9 461 aa10.18□□□□□ -0.78
NIF3L1-206ENST00000416651 TSHZ3Q63HK5 1081 aa10.18□□□□□ -0.78
NIF3L1-206ENST00000416651 SYCE2Q6PIF2 218 aa10.18□□□□□ -0.78
NIF3L1-206ENST00000416651 BTNL9Q6UXG8 535 aa10.18□□□□□ -0.78
NIF3L1-206ENST00000416651 ZBTB33Q86T24 672 aa10.18□□□□□ -0.78
NIF3L1-206ENST00000416651 RTN4RL1Q86UN2 441 aaPredicted RBP10.18□□□□□ -0.78
NIF3L1-206ENST00000416651 ITPRIPQ8IWB1 547 aa10.18□□□□□ -0.78
NIF3L1-206ENST00000416651 SIRT2Q8IXJ6 389 aa10.18□□□□□ -0.78
NIF3L1-206ENST00000416651 IFNL3Q8IZI9 196 aa10.18□□□□□ -0.78
NIF3L1-206ENST00000416651 ATP8B4Q8TF62 1192 aa10.18□□□□□ -0.78
NIF3L1-206ENST00000416651 ATP6V0A1Q93050 837 aa10.18□□□□□ -0.78
NIF3L1-206ENST00000416651 C16orf70Q9BSU1 422 aa10.18□□□□□ -0.78
NIF3L1-206ENST00000416651 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.18□□□□□ -0.78
NIF3L1-206ENST00000416651 RNPEPQ9H4A4 650 aa10.18□□□□□ -0.78
NIF3L1-206ENST00000416651 R4GN57 208 aa10.18□□□□□ -0.78
NIF3L1-206ENST00000416651 GPR179Q6PRD1 2367 aa10.17□□□□□ -0.78
NIF3L1-206ENST00000416651 CHD8Q9HCK8 2581 aa10.17□□□□□ -0.78
NIF3L1-206ENST00000416651 IPO8O15397 1037 aaKnown RBP10.17□□□□□ -0.78
NIF3L1-206ENST00000416651 FOXP2O15409 715 aa10.17□□□□□ -0.78
NIF3L1-206ENST00000416651 GPAA1O43292 621 aa10.17□□□□□ -0.78
NIF3L1-206ENST00000416651 SMARCA5O60264 1052 aaPredicted RBP10.17□□□□□ -0.78
NIF3L1-206ENST00000416651 CHRNA1P02708 482 aa10.17□□□□□ -0.78
NIF3L1-206ENST00000416651 CCNYL3P0C7X3 344 aa10.17□□□□□ -0.78
NIF3L1-206ENST00000416651 GHRP10912 638 aa10.17□□□□□ -0.78
NIF3L1-206ENST00000416651 NPR3P17342 541 aa10.17□□□□□ -0.78
NIF3L1-206ENST00000416651 ERVFC1P60507 584 aa10.17□□□□□ -0.78
NIF3L1-206ENST00000416651 SH3BP2P78314 561 aa10.17□□□□□ -0.78
NIF3L1-206ENST00000416651 KANK3Q6NY19 840 aa10.17□□□□□ -0.78
NIF3L1-206ENST00000416651 SYTL5Q8TDW5 730 aaPredicted RBP10.17□□□□□ -0.78
NIF3L1-206ENST00000416651 ZBTB10Q96DT7 871 aa10.17□□□□□ -0.78
NIF3L1-206ENST00000416651 SETD4Q9NVD3 440 aa10.17□□□□□ -0.78
NIF3L1-206ENST00000416651 SYNPO2Q9UMS6 1093 aa10.17□□□□□ -0.78
NIF3L1-206ENST00000416651 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.17□□□□□ -0.78
NIF3L1-206ENST00000416651 OTOGLQ3ZCN5 2332 aa10.17□□□□□ -0.78
NIF3L1-206ENST00000416651 TTC3P53804 2025 aa10.16□□□□□ -0.78
NIF3L1-206ENST00000416651 LOC102724159A0A0B4J2E5 919 aa10.16□□□□□ -0.78
NIF3L1-206ENST00000416651 C17orf102A2RUQ5 167 aa10.16□□□□□ -0.78
NIF3L1-206ENST00000416651 APPP05067 770 aa10.16□□□□□ -0.78
NIF3L1-206ENST00000416651 SMIM10L2AP0DMW4 78 aa10.16□□□□□ -0.78
NIF3L1-206ENST00000416651 SMIM10L2BP0DMW5 78 aa10.16□□□□□ -0.78
NIF3L1-206ENST00000416651 ATF7P17544 494 aaPredicted RBP10.16□□□□□ -0.78
NIF3L1-206ENST00000416651 NDUFV2P19404 249 aa10.16□□□□□ -0.78
NIF3L1-206ENST00000416651 EIF2AK2P19525 551 aaKnown RBP10.16□□□□□ -0.78
NIF3L1-206ENST00000416651 IBSPP21815 317 aaPredicted RBP10.16□□□□□ -0.78
NIF3L1-206ENST00000416651 HOXC8P31273 242 aa10.16□□□□□ -0.78
NIF3L1-206ENST00000416651 APOBRQ0VD83 1088 aa10.16□□□□□ -0.78
NIF3L1-206ENST00000416651 COL9A2Q14055 689 aaPredicted RBP10.16□□□□□ -0.78
NIF3L1-206ENST00000416651 SUZ12Q15022 739 aaKnown RBP10.16□□□□□ -0.78
NIF3L1-206ENST00000416651 PWP2Q15269 919 aaKnown RBP10.16□□□□□ -0.78
NIF3L1-206ENST00000416651 ANGPT1Q15389 498 aa10.16□□□□□ -0.78
NIF3L1-206ENST00000416651 DESI1Q6ICB0 168 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms