RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 SNX1Q13596 522 aa17.81■□□□□ 0.44
PHTF1-205ENST00000393357 CAPN12Q6ZSI9 719 aa17.81■□□□□ 0.44
PHTF1-205ENST00000393357 ELMO3Q96BJ8 720 aa17.81■□□□□ 0.44
PHTF1-205ENST00000393357 FAM84BQ96KN1 310 aaPredicted RBP17.81■□□□□ 0.44
PHTF1-205ENST00000393357 C6orf50Q9HD87 102 aa17.81■□□□□ 0.44
PHTF1-205ENST00000393357 ERVK-5Q9HDB9 667 aa17.81■□□□□ 0.44
PHTF1-205ENST00000393357 CEP72Q9P209 647 aa17.81■□□□□ 0.44
PHTF1-205ENST00000393357 CYP19A1P11511 503 aaPredicted RBP17.81■□□□□ 0.44
PHTF1-205ENST00000393357 SLC8A1P32418 973 aa17.81■□□□□ 0.44
PHTF1-205ENST00000393357 TMEM266Q2M3C6 531 aa17.81■□□□□ 0.44
PHTF1-205ENST00000393357 UNC13DQ70J99 1090 aa17.81■□□□□ 0.44
PHTF1-205ENST00000393357 YTHDF3Q7Z739 585 aaKnown RBP17.81■□□□□ 0.44
PHTF1-205ENST00000393357 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.81■□□□□ 0.44
PHTF1-205ENST00000393357 POTEB3A0JP26 581 aa17.8■□□□□ 0.44
PHTF1-205ENST00000393357 POTECB2RU33 542 aa17.8■□□□□ 0.44
PHTF1-205ENST00000393357 MPHOSPH10O00566 681 aaKnown RBP17.8■□□□□ 0.44
PHTF1-205ENST00000393357 ITIH3Q06033 890 aa17.8■□□□□ 0.44
PHTF1-205ENST00000393357 POTEBQ6S5H4 581 aa17.8■□□□□ 0.44
PHTF1-205ENST00000393357 ZNF662Q6ZS27 426 aa17.8■□□□□ 0.44
PHTF1-205ENST00000393357 SH3RF3Q8TEJ3 882 aaPredicted RBP17.8■□□□□ 0.44
PHTF1-205ENST00000393357 ECT2Q9H8V3 914 aa17.8■□□□□ 0.44
PHTF1-205ENST00000393357 BARHL2Q9NY43 387 aa17.8■□□□□ 0.44
PHTF1-205ENST00000393357 TCP11X1B4DZS4 312 aa17.8■□□□□ 0.44
PHTF1-205ENST00000393357 AP1G2O75843 785 aa17.8■□□□□ 0.44
PHTF1-205ENST00000393357 ALDH5A1P51649 535 aaPredicted RBP17.8■□□□□ 0.44
PHTF1-205ENST00000393357 CDK17Q00537 523 aa17.8■□□□□ 0.44
PHTF1-205ENST00000393357 ZNF746Q6NUN9 644 aaPredicted RBP17.8■□□□□ 0.44
PHTF1-205ENST00000393357 GPBP1Q86WP2 473 aa17.8■□□□□ 0.44
PHTF1-205ENST00000393357 CCDC26Q8TAB7 109 aa17.8■□□□□ 0.44
PHTF1-205ENST00000393357 LMBR1Q8WVP7 490 aa17.8■□□□□ 0.44
PHTF1-205ENST00000393357 C18orf8Q96DM3 657 aa17.8■□□□□ 0.44
PHTF1-205ENST00000393357 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.8■□□□□ 0.44
PHTF1-205ENST00000393357 ZMYND12Q9H0C1 365 aa17.8■□□□□ 0.44
PHTF1-205ENST00000393357 BMP2KQ9NSY1 1161 aaPredicted RBP17.8■□□□□ 0.44
PHTF1-205ENST00000393357 CTNNAL1Q9UBT7 734 aa17.8■□□□□ 0.44
PHTF1-205ENST00000393357 TNS3Q68CZ2 1445 aa17.8■□□□□ 0.44
PHTF1-205ENST00000393357 ORC4O43929 436 aa17.79■□□□□ 0.44
PHTF1-205ENST00000393357 CASP5P51878 434 aa17.79■□□□□ 0.44
PHTF1-205ENST00000393357 PABPC4Q13310 644 aaKnown RBP eCLIP17.79■□□□□ 0.44
PHTF1-205ENST00000393357 HP1BP3Q5SSJ5 553 aaPredicted RBP17.79■□□□□ 0.44
PHTF1-205ENST00000393357 NSUN4Q96CB9 384 aaKnown RBP17.79■□□□□ 0.44
PHTF1-205ENST00000393357 POP1Q99575 1024 aaKnown RBP17.79■□□□□ 0.44
PHTF1-205ENST00000393357 AJAP1Q9UKB5 411 aaPredicted RBP17.79■□□□□ 0.44
PHTF1-205ENST00000393357 FIGNQ5HY92 759 aa17.79■□□□□ 0.44
PHTF1-205ENST00000393357 FAM118BQ9BPY3 351 aa17.79■□□□□ 0.44
PHTF1-205ENST00000393357 PPP1R9AQ9ULJ8 1098 aa17.79■□□□□ 0.44
PHTF1-205ENST00000393357 USP17L5A8MUK1 530 aa17.79■□□□□ 0.44
PHTF1-205ENST00000393357 PJA2O43164 708 aa17.79■□□□□ 0.44
PHTF1-205ENST00000393357 CASP4P49662 377 aa17.79■□□□□ 0.44
PHTF1-205ENST00000393357 SATB1Q01826 763 aa17.79■□□□□ 0.44
PHTF1-205ENST00000393357 PICALMQ13492 652 aa17.79■□□□□ 0.44
PHTF1-205ENST00000393357 WLSQ5T9L3 541 aa17.79■□□□□ 0.44
PHTF1-205ENST00000393357 TRPM8Q7Z2W7 1104 aa17.79■□□□□ 0.44
PHTF1-205ENST00000393357 MXD3Q9BW11 206 aa17.79■□□□□ 0.44
PHTF1-205ENST00000393357 TAL1P17542 331 aaPredicted RBP17.78■□□□□ 0.44
PHTF1-205ENST00000393357 SNAP25P60880 206 aa17.78■□□□□ 0.44
PHTF1-205ENST00000393357 DR1Q01658 176 aa17.78■□□□□ 0.44
PHTF1-205ENST00000393357 KCNA1Q09470 495 aa17.78■□□□□ 0.44
PHTF1-205ENST00000393357 ERFEQ4G0M1 354 aa17.78■□□□□ 0.44
PHTF1-205ENST00000393357 FMNL3Q8IVF7 1028 aa17.78■□□□□ 0.44
PHTF1-205ENST00000393357 NAGPAQ9UK23 515 aa17.78■□□□□ 0.44
PHTF1-205ENST00000393357 HDAC9Q9UKV0 1011 aa17.78■□□□□ 0.44
PHTF1-205ENST00000393357 DAAM1Q9Y4D1 1078 aa17.78■□□□□ 0.44
PHTF1-205ENST00000393357 SSU72P8A0A1W2PR75 194 aa17.78■□□□□ 0.44
PHTF1-205ENST00000393357 H2AFZP0C0S5 128 aa17.78■□□□□ 0.44
PHTF1-205ENST00000393357 HNRNPH3P31942 346 aaKnown RBP17.78■□□□□ 0.44
PHTF1-205ENST00000393357 USP11P51784 963 aa17.78■□□□□ 0.44
PHTF1-205ENST00000393357 GRIK5Q16478 980 aa17.78■□□□□ 0.44
PHTF1-205ENST00000393357 H2AFVQ71UI9 128 aa17.78■□□□□ 0.44
PHTF1-205ENST00000393357 PWWP2AQ96N64 755 aa17.78■□□□□ 0.44
PHTF1-205ENST00000393357 BIRC3Q13489 604 aa17.77■□□□□ 0.44
PHTF1-205ENST00000393357 CUL1Q13616 776 aa17.77■□□□□ 0.44
PHTF1-205ENST00000393357 EXOC3L4Q17RC7 722 aa17.77■□□□□ 0.44
PHTF1-205ENST00000393357 GUF1Q8N442 669 aaKnown RBP17.77■□□□□ 0.44
PHTF1-205ENST00000393357 POTEFA5A3E0 1075 aa17.77■□□□□ 0.44
PHTF1-205ENST00000393357 ATMINO43313 823 aaPredicted RBP17.77■□□□□ 0.44
PHTF1-205ENST00000393357 CLSTN1O94985 981 aa17.77■□□□□ 0.44
PHTF1-205ENST00000393357 KRT16P08779 473 aa17.77■□□□□ 0.44
PHTF1-205ENST00000393357 POTEIP0CG38 1075 aa17.77■□□□□ 0.44
PHTF1-205ENST00000393357 YY1P25490 414 aa17.77■□□□□ 0.44
PHTF1-205ENST00000393357 CAPRIN2Q6IMN6 1127 aaKnown RBP17.77■□□□□ 0.44
PHTF1-205ENST00000393357 ZNF449Q6P9G9 518 aa17.77■□□□□ 0.44
PHTF1-205ENST00000393357 POTEGQ6S5H5 508 aa17.77■□□□□ 0.44
PHTF1-205ENST00000393357 POTEEQ6S8J3 1075 aa17.77■□□□□ 0.44
PHTF1-205ENST00000393357 CPNE8Q86YQ8 564 aa17.77■□□□□ 0.44
PHTF1-205ENST00000393357 BRIP1Q9BX63 1249 aa17.77■□□□□ 0.44
PHTF1-205ENST00000393357 EMILIN3Q9NT22 766 aa17.77■□□□□ 0.44
PHTF1-205ENST00000393357 GH1P01241 217 aa17.77■□□□□ 0.43
PHTF1-205ENST00000393357 UCHL3P15374 230 aa17.77■□□□□ 0.43
PHTF1-205ENST00000393357 RCAN1P53805 252 aa17.77■□□□□ 0.43
PHTF1-205ENST00000393357 PMS2P54278 862 aa17.77■□□□□ 0.43
PHTF1-205ENST00000393357 EAPPQ56P03 285 aaPredicted RBP17.77■□□□□ 0.43
PHTF1-205ENST00000393357 CD302Q8IX05 232 aa17.77■□□□□ 0.43
PHTF1-205ENST00000393357 TPCN2Q8NHX9 752 aa17.77■□□□□ 0.43
PHTF1-205ENST00000393357 RBM46Q8TBY0 533 aaKnown RBP17.77■□□□□ 0.43
PHTF1-205ENST00000393357 RNF25Q96BH1 459 aaPredicted RBP17.77■□□□□ 0.43
PHTF1-205ENST00000393357 ANAPC4Q9UJX5 808 aa17.77■□□□□ 0.43
PHTF1-205ENST00000393357 PCDHGC5Q9Y5F6 944 aa17.77■□□□□ 0.43
PHTF1-205ENST00000393357 MARCKSL1P49006 195 aa17.76■□□□□ 0.43
PHTF1-205ENST00000393357 GALCP54803 685 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms