RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 MACROD2A1Z1Q3 448 aa18.92■□□□□ 0.62
PDX1-201ENST00000381033 CTAGE9A4FU28 777 aa18.92■□□□□ 0.62
PDX1-201ENST00000381033 TMEM150BA6NC51 233 aa18.92■□□□□ 0.62
PDX1-201ENST00000381033 EFCAB8A8MWE9 144 aa18.92■□□□□ 0.62
PDX1-201ENST00000381033 H2AFXP16104 143 aaPredicted RBP18.92■□□□□ 0.62
PDX1-201ENST00000381033 EIF4A3P38919 411 aaKnown RBP18.92■□□□□ 0.62
PDX1-201ENST00000381033 PPP2R5CQ13362 524 aa18.92■□□□□ 0.62
PDX1-201ENST00000381033 ENOX2Q16206 610 aaKnown RBP18.92■□□□□ 0.62
PDX1-201ENST00000381033 KNOP1Q1ED39 458 aaKnown RBP18.92■□□□□ 0.62
PDX1-201ENST00000381033 FIGNQ5HY92 759 aa18.92■□□□□ 0.62
PDX1-201ENST00000381033 EPM2AIP1Q7L775 607 aaPredicted RBP18.92■□□□□ 0.62
PDX1-201ENST00000381033 KIAA1328Q86T90 577 aa18.92■□□□□ 0.62
PDX1-201ENST00000381033 KCNH7Q9NS40 1196 aa18.92■□□□□ 0.62
PDX1-201ENST00000381033 CALCOCO1Q9P1Z2 691 aa18.92■□□□□ 0.62
PDX1-201ENST00000381033 RIPK3Q9Y572 518 aa18.92■□□□□ 0.62
PDX1-201ENST00000381033 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.92■□□□□ 0.62
PDX1-201ENST00000381033 A0A1W2PQJ5 194 aa18.91■□□□□ 0.62
PDX1-201ENST00000381033 PLA2G6O60733 806 aa18.91■□□□□ 0.62
PDX1-201ENST00000381033 ACTN1P12814 892 aa18.91■□□□□ 0.62
PDX1-201ENST00000381033 EIF2AK2P19525 551 aaKnown RBP18.91■□□□□ 0.62
PDX1-201ENST00000381033 MRPS9P82933 396 aaKnown RBP18.91■□□□□ 0.62
PDX1-201ENST00000381033 COG2Q14746 738 aa18.91■□□□□ 0.62
PDX1-201ENST00000381033 CCDC42Q96M95 316 aa18.91■□□□□ 0.62
PDX1-201ENST00000381033 TAAR1Q96RJ0 339 aa18.91■□□□□ 0.62
PDX1-201ENST00000381033 MTFR1LQ9H019 292 aa18.91■□□□□ 0.62
PDX1-201ENST00000381033 FEZ2Q9UHY8 353 aaPredicted RBP18.91■□□□□ 0.62
PDX1-201ENST00000381033 AKAP3O75969 853 aa18.91■□□□□ 0.62
PDX1-201ENST00000381033 SEC31AO94979 1220 aaKnown RBP18.91■□□□□ 0.62
PDX1-201ENST00000381033 HSD17B4P51659 736 aa18.91■□□□□ 0.62
PDX1-201ENST00000381033 ARID5AQ03989 594 aa18.91■□□□□ 0.62
PDX1-201ENST00000381033 PRKG1Q13976 671 aa18.91■□□□□ 0.62
PDX1-201ENST00000381033 C1orf186Q6ZWK4 172 aa18.91■□□□□ 0.62
PDX1-201ENST00000381033 CALR3Q96L12 384 aaKnown RBP18.91■□□□□ 0.62
PDX1-201ENST00000381033 BRCA1P38398 1863 aaKnown RBP18.9■□□□□ 0.62
PDX1-201ENST00000381033 ASTN1O14525 1302 aa18.9■□□□□ 0.62
PDX1-201ENST00000381033 TLR2O60603 784 aa18.9■□□□□ 0.62
PDX1-201ENST00000381033 POLR2FP61218 127 aaKnown RBP18.9■□□□□ 0.62
PDX1-201ENST00000381033 KCNH2Q12809 1159 aa18.9■□□□□ 0.62
PDX1-201ENST00000381033 MYCT1Q8N699 235 aa18.9■□□□□ 0.62
PDX1-201ENST00000381033 ANKRD13CQ8N6S4 541 aa18.9■□□□□ 0.62
PDX1-201ENST00000381033 JAKMIP2Q96AA8 810 aa18.9■□□□□ 0.62
PDX1-201ENST00000381033 MXRA8Q9BRK3 442 aa18.9■□□□□ 0.62
PDX1-201ENST00000381033 LXNQ9BS40 222 aa18.9■□□□□ 0.62
PDX1-201ENST00000381033 LSM14BQ9BX40 385 aaKnown RBP18.9■□□□□ 0.62
PDX1-201ENST00000381033 RPAP3Q9H6T3 665 aaPredicted RBP18.9■□□□□ 0.62
PDX1-201ENST00000381033 CDC23Q9UJX2 597 aa18.9■□□□□ 0.62
PDX1-201ENST00000381033 ATP1A1P05023 1023 aaKnown RBP18.9■□□□□ 0.62
PDX1-201ENST00000381033 RPS6P62753 249 aaKnown RBP18.9■□□□□ 0.62
PDX1-201ENST00000381033 ITGB3BPQ13352 177 aaPredicted RBP18.9■□□□□ 0.62
PDX1-201ENST00000381033 PLS1Q14651 629 aa18.9■□□□□ 0.62
PDX1-201ENST00000381033 ANGEL2Q5VTE6 544 aaKnown RBP18.9■□□□□ 0.62
PDX1-201ENST00000381033 RSRC2Q7L4I2 434 aaKnown RBP18.9■□□□□ 0.62
PDX1-201ENST00000381033 CACNA2D4Q7Z3S7 1137 aa18.9■□□□□ 0.62
PDX1-201ENST00000381033 NEK11Q8NG66 645 aa18.9■□□□□ 0.62
PDX1-201ENST00000381033 NAPGQ99747 312 aaPredicted RBP18.9■□□□□ 0.62
PDX1-201ENST00000381033 KIAA1683Q9H0B3 1180 aa18.9■□□□□ 0.62
PDX1-201ENST00000381033 DONSONQ9NYP3 566 aa18.9■□□□□ 0.62
PDX1-201ENST00000381033 RBBP6Q7Z6E9 1792 aaKnown RBP18.89■□□□□ 0.62
PDX1-201ENST00000381033 WDR46O15213 610 aaKnown RBP18.89■□□□□ 0.61
PDX1-201ENST00000381033 TBCAO75347 108 aaKnown RBP18.89■□□□□ 0.61
PDX1-201ENST00000381033 CYLC1P35663 651 aaPredicted RBP18.89■□□□□ 0.61
PDX1-201ENST00000381033 NOP2P46087 812 aaKnown RBP18.89■□□□□ 0.61
PDX1-201ENST00000381033 GFPT1Q06210 699 aaPredicted RBP18.89■□□□□ 0.61
PDX1-201ENST00000381033 TRPM4Q8TD43 1214 aa18.89■□□□□ 0.61
PDX1-201ENST00000381033 SLC38A10Q9HBR0 1119 aa18.89■□□□□ 0.61
PDX1-201ENST00000381033 EIF3CLB5ME19 914 aaKnown RBP18.89■□□□□ 0.61
PDX1-201ENST00000381033 CETN3O15182 167 aa18.89■□□□□ 0.61
PDX1-201ENST00000381033 TGFB1I1O43294 461 aa18.89■□□□□ 0.61
PDX1-201ENST00000381033 SLC9A1P19634 815 aa18.89■□□□□ 0.61
PDX1-201ENST00000381033 KIF11P52732 1056 aa18.89■□□□□ 0.61
PDX1-201ENST00000381033 TNFAIP1Q13829 316 aa18.89■□□□□ 0.61
PDX1-201ENST00000381033 SYTL5Q8TDW5 730 aaPredicted RBP18.89■□□□□ 0.61
PDX1-201ENST00000381033 ATG4CQ96DT6 458 aa18.89■□□□□ 0.61
PDX1-201ENST00000381033 CEP63Q96MT8 703 aa18.89■□□□□ 0.61
PDX1-201ENST00000381033 EIF3CQ99613 913 aaKnown RBP18.89■□□□□ 0.61
PDX1-201ENST00000381033 HAUS4Q9H6D7 363 aa18.89■□□□□ 0.61
PDX1-201ENST00000381033 PCDHB13Q9Y5F0 798 aa18.89■□□□□ 0.61
PDX1-201ENST00000381033 MYH10P35580 1976 aa18.88■□□□□ 0.61
PDX1-201ENST00000381033 CTNND1O60716 968 aaKnown RBP18.88■□□□□ 0.61
PDX1-201ENST00000381033 ATP9AO75110 1047 aa18.88■□□□□ 0.61
PDX1-201ENST00000381033 DCAF17Q5H9S7 520 aaPredicted RBP18.88■□□□□ 0.61
PDX1-201ENST00000381033 HGSNATQ68CP4 663 aa18.88■□□□□ 0.61
PDX1-201ENST00000381033 B3GNT9Q6UX72 402 aa18.88■□□□□ 0.61
PDX1-201ENST00000381033 FIZ1Q96SL8 496 aa18.88■□□□□ 0.61
PDX1-201ENST00000381033 MLXIPQ9HAP2 919 aa18.88■□□□□ 0.61
PDX1-201ENST00000381033 DHX15O43143 795 aaKnown RBP18.88■□□□□ 0.61
PDX1-201ENST00000381033 PEX10O60683 326 aa18.88■□□□□ 0.61
PDX1-201ENST00000381033 MYCLP12524 364 aaPredicted RBP18.88■□□□□ 0.61
PDX1-201ENST00000381033 HNRNPH3P31942 346 aaKnown RBP18.88■□□□□ 0.61
PDX1-201ENST00000381033 AMPD2Q01433 879 aa18.88■□□□□ 0.61
PDX1-201ENST00000381033 GABPB1Q06547 395 aaPredicted RBP18.88■□□□□ 0.61
PDX1-201ENST00000381033 TRAF1Q13077 416 aa18.88■□□□□ 0.61
PDX1-201ENST00000381033 NSMFQ6X4W1 530 aa18.88■□□□□ 0.61
PDX1-201ENST00000381033 DNAAF5Q86Y56 855 aa18.88■□□□□ 0.61
PDX1-201ENST00000381033 WRNIP1Q96S55 665 aa18.88■□□□□ 0.61
PDX1-201ENST00000381033 TUFT1Q9NNX1 390 aa18.88■□□□□ 0.61
PDX1-201ENST00000381033 SALL4Q9UJQ4 1053 aa18.88■□□□□ 0.61
PDX1-201ENST00000381033 DDX41Q9UJV9 622 aaKnown RBP18.88■□□□□ 0.61
PDX1-201ENST00000381033 TRAF3IP3Q9Y228 551 aa18.88■□□□□ 0.61
PDX1-201ENST00000381033 FZD9O00144 591 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms