RNA–Protein interactions for RNA: ENST00000380821.7

SNAPC3-202, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 5,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-202ENST00000380821 IGSF1Q8N6C5 1336 aa18.37■□□□□ 0.53
SNAPC3-202ENST00000380821 TCP10L2B9ZVM9 353 aa18.37■□□□□ 0.53
SNAPC3-202ENST00000380821 NVLO15381 856 aaKnown RBP18.37■□□□□ 0.53
SNAPC3-202ENST00000380821 TEDDM1Q5T9Z0 273 aa18.37■□□□□ 0.53
SNAPC3-202ENST00000380821 ZSWIM5Q9P217 1185 aa18.37■□□□□ 0.53
SNAPC3-202ENST00000380821 CSADQ9Y600 493 aa18.37■□□□□ 0.53
SNAPC3-202ENST00000380821 TAC1P20366 129 aa18.37■□□□□ 0.53
SNAPC3-202ENST00000380821 SCNN1DP51172 638 aa18.37■□□□□ 0.53
SNAPC3-202ENST00000380821 DYNLL1P63167 89 aaKnown RBP18.37■□□□□ 0.53
SNAPC3-202ENST00000380821 DRP2Q13474 957 aa18.37■□□□□ 0.53
SNAPC3-202ENST00000380821 PROSER3Q2NL68 480 aa18.37■□□□□ 0.53
SNAPC3-202ENST00000380821 SKA2Q8WVK7 121 aaPredicted RBP18.37■□□□□ 0.53
SNAPC3-202ENST00000380821 DHX38Q92620 1227 aaKnown RBP18.37■□□□□ 0.53
SNAPC3-202ENST00000380821 PDLIM2Q96JY6 352 aa18.37■□□□□ 0.53
SNAPC3-202ENST00000380821 A0A0G2JND7 137 aa18.37■□□□□ 0.53
SNAPC3-202ENST00000380821 CHEK2O96017 543 aa18.37■□□□□ 0.53
SNAPC3-202ENST00000380821 PSPC1Q8WXF1 523 aaKnown RBP18.37■□□□□ 0.53
SNAPC3-202ENST00000380821 TTC1Q99614 292 aa18.37■□□□□ 0.53
SNAPC3-202ENST00000380821 MEIS1O00470 390 aa18.36■□□□□ 0.53
SNAPC3-202ENST00000380821 SRGAP2O75044 1071 aa18.36■□□□□ 0.53
SNAPC3-202ENST00000380821 ZBED1O96006 694 aa18.36■□□□□ 0.53
SNAPC3-202ENST00000380821 TOB2Q14106 344 aaPredicted RBP18.36■□□□□ 0.53
SNAPC3-202ENST00000380821 DHX40Q8IX18 779 aaKnown RBP18.36■□□□□ 0.53
SNAPC3-202ENST00000380821 ATP6V1G3Q96LB4 118 aa18.36■□□□□ 0.53
SNAPC3-202ENST00000380821 MXD3Q9BW11 206 aa18.36■□□□□ 0.53
SNAPC3-202ENST00000380821 APOBEC2Q9Y235 224 aaKnown RBP18.36■□□□□ 0.53
SNAPC3-202ENST00000380821 KCTD1Q719H9 257 aa18.36■□□□□ 0.53
SNAPC3-202ENST00000380821 ECT2Q9H8V3 914 aa18.36■□□□□ 0.53
SNAPC3-202ENST00000380821 SPC25Q9HBM1 224 aa18.36■□□□□ 0.53
SNAPC3-202ENST00000380821 FIS1Q9Y3D6 152 aa18.36■□□□□ 0.53
SNAPC3-202ENST00000380821 RFX7Q2KHR2 1363 aa18.36■□□□□ 0.53
SNAPC3-202ENST00000380821 RASA4BC9J798 803 aa18.36■□□□□ 0.53
SNAPC3-202ENST00000380821 RASA4O43374 803 aa18.36■□□□□ 0.53
SNAPC3-202ENST00000380821 KIF1CO43896 1103 aaKnown RBP18.36■□□□□ 0.53
SNAPC3-202ENST00000380821 USP14P54578 494 aa18.36■□□□□ 0.53
SNAPC3-202ENST00000380821 SIRT2Q8IXJ6 389 aa18.36■□□□□ 0.53
SNAPC3-202ENST00000380821 OLFM3Q96PB7 478 aa18.36■□□□□ 0.53
SNAPC3-202ENST00000380821 CYTH2Q99418 400 aa18.36■□□□□ 0.53
SNAPC3-202ENST00000380821 SAMD9Q5K651 1589 aa18.36■□□□□ 0.53
SNAPC3-202ENST00000380821 MAGOHP61326 146 aaKnown RBP18.36■□□□□ 0.53
SNAPC3-202ENST00000380821 TMPRSS15P98073 1019 aa18.36■□□□□ 0.53
SNAPC3-202ENST00000380821 CDR2Q01850 454 aa18.36■□□□□ 0.53
SNAPC3-202ENST00000380821 OSBPL9Q96SU4 736 aa18.36■□□□□ 0.53
SNAPC3-202ENST00000380821 KLC2Q9H0B6 622 aa18.36■□□□□ 0.53
SNAPC3-202ENST00000380821 CDK12Q9NYV4 1490 aaPredicted RBP18.36■□□□□ 0.53
SNAPC3-202ENST00000380821 CLEC17AQ6ZS10 378 aa18.36■□□□□ 0.53
SNAPC3-202ENST00000380821 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.36■□□□□ 0.531e-6■■■□□ 17.7
SNAPC3-202ENST00000380821 PAGR1Q9BTK6 254 aa18.36■□□□□ 0.53
SNAPC3-202ENST00000380821 ADAMTS1Q9UHI8 967 aa18.36■□□□□ 0.53
SNAPC3-202ENST00000380821 ABL1P00519 1130 aa18.35■□□□□ 0.53
SNAPC3-202ENST00000380821 AP2B1P63010 937 aa18.35■□□□□ 0.53
SNAPC3-202ENST00000380821 FAF2Q96CS3 445 aa18.35■□□□□ 0.53
SNAPC3-202ENST00000380821 ATP8B3O60423 1300 aa18.35■□□□□ 0.53
SNAPC3-202ENST00000380821 CFAP74Q9C0B2 1584 aa18.35■□□□□ 0.53
SNAPC3-202ENST00000380821 HAUS5O94927 633 aa18.35■□□□□ 0.53
SNAPC3-202ENST00000380821 KRT10P13645 584 aa18.35■□□□□ 0.53
SNAPC3-202ENST00000380821 GRAMD4Q6IC98 578 aa18.35■□□□□ 0.53
SNAPC3-202ENST00000380821 FAM193BQ96PV7 902 aaPredicted RBP18.35■□□□□ 0.53
SNAPC3-202ENST00000380821 PPARGC1AQ9UBK2 798 aaKnown RBP18.35■□□□□ 0.53
SNAPC3-202ENST00000380821 SYDE2Q5VT97 1194 aa18.35■□□□□ 0.53
SNAPC3-202ENST00000380821 OR6B2Q6IFH4 312 aa18.35■□□□□ 0.53
SNAPC3-202ENST00000380821 FMR1NBQ8N0W7 255 aaPredicted RBP18.35■□□□□ 0.53
SNAPC3-202ENST00000380821 TTC13Q8NBP0 860 aa18.35■□□□□ 0.53
SNAPC3-202ENST00000380821 KANSL2Q9H9L4 492 aa18.35■□□□□ 0.53
SNAPC3-202ENST00000380821 PPME1Q9Y570 386 aa18.35■□□□□ 0.53
SNAPC3-202ENST00000380821 PNMA6FA0A0J9YX94 578 aa18.35■□□□□ 0.53
SNAPC3-202ENST00000380821 OCA2Q04671 838 aa18.35■□□□□ 0.53
SNAPC3-202ENST00000380821 TAF1BQ53T94 588 aaPredicted RBP18.35■□□□□ 0.53
SNAPC3-202ENST00000380821 SPOUT1Q5T280 376 aaKnown RBP18.35■□□□□ 0.53
SNAPC3-202ENST00000380821 CDHR1Q96JP9 859 aa18.35■□□□□ 0.53
SNAPC3-202ENST00000380821 SNX24Q9Y343 169 aa18.35■□□□□ 0.53
SNAPC3-202ENST00000380821 PBRM1Q86U86 1689 aa18.35■□□□□ 0.53
SNAPC3-202ENST00000380821 PRKG1Q13976 671 aa18.34■□□□□ 0.53
SNAPC3-202ENST00000380821 TRIM67Q6ZTA4 783 aa18.34■□□□□ 0.53
SNAPC3-202ENST00000380821 SCHIP1Q9P0W5 487 aaPredicted RBP18.34■□□□□ 0.53
SNAPC3-202ENST00000380821 DISP1Q96F81 1524 aa18.34■□□□□ 0.53
SNAPC3-202ENST00000380821 FAM187AA6NFU0 413 aa18.34■□□□□ 0.53
SNAPC3-202ENST00000380821 LRRC53A6NM62 1247 aa18.34■□□□□ 0.53
SNAPC3-202ENST00000380821 PRKAB2O43741 272 aa18.34■□□□□ 0.53
SNAPC3-202ENST00000380821 MKRN3Q13064 507 aaKnown RBP18.34■□□□□ 0.53
SNAPC3-202ENST00000380821 SEMA3FQ13275 785 aa18.34■□□□□ 0.53
SNAPC3-202ENST00000380821 METTL23Q86XA0 190 aa18.34■□□□□ 0.53
SNAPC3-202ENST00000380821 CEP170P1Q96L14 293 aa18.34■□□□□ 0.53
SNAPC3-202ENST00000380821 TMEM2Q9UHN6 1383 aa18.34■□□□□ 0.53
SNAPC3-202ENST00000380821 TTC17Q96AE7 1141 aa18.34■□□□□ 0.53
SNAPC3-202ENST00000380821 RPS6KC1Q96S38 1066 aa18.34■□□□□ 0.53
SNAPC3-202ENST00000380821 POLR3CQ9BUI4 534 aaPredicted RBP18.34■□□□□ 0.53
SNAPC3-202ENST00000380821 TRIM33Q9UPN9 1127 aa18.34■□□□□ 0.53
SNAPC3-202ENST00000380821 KPNA7A9QM74 516 aa18.34■□□□□ 0.53
SNAPC3-202ENST00000380821 KRT38O76015 456 aa18.34■□□□□ 0.53
SNAPC3-202ENST00000380821 MYO1EQ12965 1108 aa18.34■□□□□ 0.53
SNAPC3-202ENST00000380821 SLC12A6Q9UHW9 1150 aa18.34■□□□□ 0.53
SNAPC3-202ENST00000380821 GPC5P78333 572 aa18.34■□□□□ 0.53
SNAPC3-202ENST00000380821 C4orf50Q6ZRC1 276 aa18.34■□□□□ 0.53
SNAPC3-202ENST00000380821 ACAD11Q709F0 780 aa18.34■□□□□ 0.53
SNAPC3-202ENST00000380821 TAF1DQ9H5J8 278 aaPredicted RBP18.34■□□□□ 0.53
SNAPC3-202ENST00000380821 DNAJC12Q9UKB3 198 aa18.34■□□□□ 0.53
SNAPC3-202ENST00000380821 LOC102724159A0A0B4J2E5 919 aa18.33■□□□□ 0.53
SNAPC3-202ENST00000380821 CDC25AP30304 524 aa18.33■□□□□ 0.53
SNAPC3-202ENST00000380821 DDIT3P35638 169 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms