RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 PPM1FP49593 454 aaPredicted RBP19.52■□□□□ 0.71
PTPDC1-202ENST00000375360 MRPS25P82663 173 aaKnown RBP19.52■□□□□ 0.71
PTPDC1-202ENST00000375360 HACL1Q9UJ83 578 aa19.52■□□□□ 0.71
PTPDC1-202ENST00000375360 UBR1Q8IWV7 1749 aa19.51■□□□□ 0.71
PTPDC1-202ENST00000375360 IQCB1Q15051 598 aa19.51■□□□□ 0.71
PTPDC1-202ENST00000375360 GUF1Q8N442 669 aaKnown RBP19.51■□□□□ 0.71
PTPDC1-202ENST00000375360 XXYLT1Q8NBI6 393 aa19.51■□□□□ 0.71
PTPDC1-202ENST00000375360 FAM149B1Q96BN6 582 aa19.51■□□□□ 0.71
PTPDC1-202ENST00000375360 PANX2Q96RD6 677 aa19.51■□□□□ 0.71
PTPDC1-202ENST00000375360 RPS6KC1Q96S38 1066 aa19.51■□□□□ 0.71
PTPDC1-202ENST00000375360 TEX13BQ9BXU2 312 aa19.51■□□□□ 0.71
PTPDC1-202ENST00000375360 TRIM49P0CI25 452 aa19.51■□□□□ 0.71
PTPDC1-202ENST00000375360 TRIM49CP0CI26 452 aa19.51■□□□□ 0.71
PTPDC1-202ENST00000375360 MCPH1Q8NEM0 835 aa19.51■□□□□ 0.71
PTPDC1-202ENST00000375360 SAAL1Q96ER3 474 aa19.51■□□□□ 0.71
PTPDC1-202ENST00000375360 ZDHHC15Q96MV8 337 aa19.51■□□□□ 0.71
PTPDC1-202ENST00000375360 HGSO14964 777 aaPredicted RBP19.51■□□□□ 0.71
PTPDC1-202ENST00000375360 GUCY2DQ02846 1103 aa19.51■□□□□ 0.71
PTPDC1-202ENST00000375360 COL9A3Q14050 684 aaPredicted RBP19.51■□□□□ 0.71
PTPDC1-202ENST00000375360 PPP4R3CPQ6ZMV5 832 aa19.51■□□□□ 0.71
PTPDC1-202ENST00000375360 CAPN12Q6ZSI9 719 aa19.51■□□□□ 0.71
PTPDC1-202ENST00000375360 ANKRD36BP1Q96IX9 119 aa19.51■□□□□ 0.71
PTPDC1-202ENST00000375360 FAM213AQ9BRX8 229 aa19.51■□□□□ 0.71
PTPDC1-202ENST00000375360 BPIFB4P59827 614 aa19.5■□□□□ 0.71
PTPDC1-202ENST00000375360 PDIA5Q14554 519 aa19.5■□□□□ 0.71
PTPDC1-202ENST00000375360 KRT71Q3SY84 523 aa19.5■□□□□ 0.71
PTPDC1-202ENST00000375360 RPGRIP1Q96KN7 1286 aa19.5■□□□□ 0.71
PTPDC1-202ENST00000375360 GOLGA6CA6NDK9 693 aa19.5■□□□□ 0.71
PTPDC1-202ENST00000375360 GOLGA6DP0CG33 693 aa19.5■□□□□ 0.71
PTPDC1-202ENST00000375360 ATG4CQ96DT6 458 aa19.5■□□□□ 0.71
PTPDC1-202ENST00000375360 KRT12Q99456 494 aa19.5■□□□□ 0.71
PTPDC1-202ENST00000375360 GOLGA6AQ9NYA3 693 aa19.5■□□□□ 0.71
PTPDC1-202ENST00000375360 PALM3A6NDB9 673 aaPredicted RBP19.5■□□□□ 0.71
PTPDC1-202ENST00000375360 WDR46O15213 610 aaKnown RBP19.5■□□□□ 0.71
PTPDC1-202ENST00000375360 CLDN3O15551 220 aa19.5■□□□□ 0.71
PTPDC1-202ENST00000375360 POLR2BP30876 1174 aaKnown RBP19.5■□□□□ 0.71
PTPDC1-202ENST00000375360 ZBTB16Q05516 673 aa19.5■□□□□ 0.71
PTPDC1-202ENST00000375360 ST3GAL1Q11201 340 aa19.5■□□□□ 0.71
PTPDC1-202ENST00000375360 CASC4Q6P4E1 433 aa19.5■□□□□ 0.71
PTPDC1-202ENST00000375360 DNAJC12Q9UKB3 198 aa19.5■□□□□ 0.71
PTPDC1-202ENST00000375360 TLR3O15455 904 aaKnown RBP19.5■□□□□ 0.71
PTPDC1-202ENST00000375360 RNF8O76064 485 aa19.5■□□□□ 0.71
PTPDC1-202ENST00000375360 NTRK3Q16288 839 aa19.5■□□□□ 0.71
PTPDC1-202ENST00000375360 PCDHA13Q9Y5I0 950 aa19.5■□□□□ 0.71
PTPDC1-202ENST00000375360 PCDHA10Q9Y5I2 948 aa19.5■□□□□ 0.71
PTPDC1-202ENST00000375360 MYMKA6NI61 221 aa19.49■□□□□ 0.71
PTPDC1-202ENST00000375360 LRRC53A6NM62 1247 aa19.49■□□□□ 0.71
PTPDC1-202ENST00000375360 CCDC89Q8N998 374 aa19.49■□□□□ 0.71
PTPDC1-202ENST00000375360 LPAR1Q92633 364 aa19.49■□□□□ 0.71
PTPDC1-202ENST00000375360 PDLIM2Q96JY6 352 aa19.49■□□□□ 0.71
PTPDC1-202ENST00000375360 ATP6V0A4Q9HBG4 840 aa19.49■□□□□ 0.71
PTPDC1-202ENST00000375360 PSMC5P62195 406 aa19.49■□□□□ 0.71
PTPDC1-202ENST00000375360 SRGAP1Q7Z6B7 1085 aa19.49■□□□□ 0.71
PTPDC1-202ENST00000375360 ABHD10Q9NUJ1 306 aa19.49■□□□□ 0.71
PTPDC1-202ENST00000375360 STAM2O75886 525 aa19.49■□□□□ 0.71
PTPDC1-202ENST00000375360 NR3C2P08235 984 aa19.49■□□□□ 0.71
PTPDC1-202ENST00000375360 RAB20Q9NX57 234 aa19.49■□□□□ 0.71
PTPDC1-202ENST00000375360 USP27XA6NNY8 438 aa19.48■□□□□ 0.71
PTPDC1-202ENST00000375360 SERPING1P05155 500 aa19.48■□□□□ 0.71
PTPDC1-202ENST00000375360 VIMP08670 466 aaKnown RBP19.48■□□□□ 0.71
PTPDC1-202ENST00000375360 SLURP2P0DP57 97 aa19.48■□□□□ 0.71
PTPDC1-202ENST00000375360 HDLBPQ00341 1268 aaKnown RBP19.48■□□□□ 0.71
PTPDC1-202ENST00000375360 CCDC170Q8IYT3 715 aa19.48■□□□□ 0.71
PTPDC1-202ENST00000375360 ZNF302Q9NR11 478 aa19.48■□□□□ 0.71
PTPDC1-202ENST00000375360 ORC2Q13416 577 aaPredicted RBP19.48■□□□□ 0.71
PTPDC1-202ENST00000375360 EPHA7Q15375 998 aa19.48■□□□□ 0.71
PTPDC1-202ENST00000375360 CATSPER4Q7RTX7 472 aa19.48■□□□□ 0.71
PTPDC1-202ENST00000375360 PODXL2Q9NZ53 605 aa19.48■□□□□ 0.71
PTPDC1-202ENST00000375360 PTPN22Q9Y2R2 807 aa19.48■□□□□ 0.71
PTPDC1-202ENST00000375360 IL1R1P14778 569 aa19.48■□□□□ 0.71
PTPDC1-202ENST00000375360 INPP5BP32019 993 aa19.48■□□□□ 0.71
PTPDC1-202ENST00000375360 MAPK6Q16659 721 aa19.48■□□□□ 0.71
PTPDC1-202ENST00000375360 AGBL3Q8NEM8 1001 aa19.48■□□□□ 0.71
PTPDC1-202ENST00000375360 ZNF148Q9UQR1 794 aa19.48■□□□□ 0.71
PTPDC1-202ENST00000375360 HIP1RO75146 1068 aa19.48■□□□□ 0.71
PTPDC1-202ENST00000375360 MAPK4P31152 587 aa19.48■□□□□ 0.71
PTPDC1-202ENST00000375360 ADCY8P40145 1251 aa19.48■□□□□ 0.71
PTPDC1-202ENST00000375360 MTF1Q14872 753 aa19.48■□□□□ 0.71
PTPDC1-202ENST00000375360 INTS8Q75QN2 995 aaKnown RBP19.48■□□□□ 0.71
PTPDC1-202ENST00000375360 RHPN2Q8IUC4 686 aa19.48■□□□□ 0.71
PTPDC1-202ENST00000375360 ENGASEQ8NFI3 743 aa19.48■□□□□ 0.71
PTPDC1-202ENST00000375360 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.48■□□□□ 0.71
PTPDC1-202ENST00000375360 MAGOHBQ96A72 148 aaKnown RBP19.48■□□□□ 0.71
PTPDC1-202ENST00000375360 BPIFA3Q9BQP9 254 aa19.48■□□□□ 0.71
PTPDC1-202ENST00000375360 DDX4Q9NQI0 724 aaKnown RBP19.48■□□□□ 0.71
PTPDC1-202ENST00000375360 SPDYE2BA6NHP3 402 aa19.47■□□□□ 0.71
PTPDC1-202ENST00000375360 EBAG9O00559 213 aa19.47■□□□□ 0.71
PTPDC1-202ENST00000375360 TBC1D8O95759 1140 aa19.47■□□□□ 0.71
PTPDC1-202ENST00000375360 SPDYE6P0CI01 402 aa19.47■□□□□ 0.71
PTPDC1-202ENST00000375360 TAL1P17542 331 aaPredicted RBP19.47■□□□□ 0.71
PTPDC1-202ENST00000375360 TOB1P50616 345 aaPredicted RBP19.47■□□□□ 0.71
PTPDC1-202ENST00000375360 NEDD9Q14511 834 aa19.47■□□□□ 0.71
PTPDC1-202ENST00000375360 STIM2Q9P246 746 aa19.47■□□□□ 0.71
PTPDC1-202ENST00000375360 OAS2P29728 719 aaKnown RBP19.47■□□□□ 0.71
PTPDC1-202ENST00000375360 HAUS6Q7Z4H7 955 aa19.47■□□□□ 0.71
PTPDC1-202ENST00000375360 AFAP1L1Q8TED9 768 aa19.47■□□□□ 0.71
PTPDC1-202ENST00000375360 IL17RBQ9NRM6 502 aa19.47■□□□□ 0.71
PTPDC1-202ENST00000375360 FEZ2Q9UHY8 353 aaPredicted RBP19.47■□□□□ 0.71
PTPDC1-202ENST00000375360 PDS5AQ29RF7 1337 aaKnown RBP19.47■□□□□ 0.71
PTPDC1-202ENST00000375360 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms