RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 TERF2Q15554 542 aa7.47□□□□□ -1.21
RNU4-39P-201ENST00000362455 AGBL5Q8NDL9 886 aa7.47□□□□□ -1.21
RNU4-39P-201ENST00000362455 MYLIPQ8WY64 445 aa7.47□□□□□ -1.21
RNU4-39P-201ENST00000362455 SEC14L1Q92503 715 aa7.47□□□□□ -1.21
RNU4-39P-201ENST00000362455 DLG3Q92796 817 aa7.47□□□□□ -1.21
RNU4-39P-201ENST00000362455 AHCYL2Q96HN2 611 aaKnown RBP7.47□□□□□ -1.21
RNU4-39P-201ENST00000362455 RXFP1Q9HBX9 757 aa7.47□□□□□ -1.21
RNU4-39P-201ENST00000362455 TOMM22Q9NS69 142 aa7.47□□□□□ -1.21
RNU4-39P-201ENST00000362455 MYOTQ9UBF9 498 aa7.47□□□□□ -1.21
RNU4-39P-201ENST00000362455 CTNND2Q9UQB3 1225 aa7.47□□□□□ -1.21
RNU4-39P-201ENST00000362455 TELO2Q9Y4R8 837 aa7.47□□□□□ -1.21
RNU4-39P-201ENST00000362455 NUB1Q9Y5A7 615 aa7.47□□□□□ -1.21
RNU4-39P-201ENST00000362455 ABCA6Q8N139 1617 aa7.46□□□□□ -1.21
RNU4-39P-201ENST00000362455 SCO2A0A1W2PP80 73 aa7.46□□□□□ -1.22
RNU4-39P-201ENST00000362455 SGSM2O43147 1006 aa7.46□□□□□ -1.22
RNU4-39P-201ENST00000362455 WNT11O96014 354 aa7.46□□□□□ -1.22
RNU4-39P-201ENST00000362455 PNLIPP16233 465 aa7.46□□□□□ -1.22
RNU4-39P-201ENST00000362455 ARL4AP40617 200 aa7.46□□□□□ -1.22
RNU4-39P-201ENST00000362455 EPHA5P54756 1037 aa7.46□□□□□ -1.22
RNU4-39P-201ENST00000362455 SMAD3P84022 425 aaKnown RBP7.46□□□□□ -1.22
RNU4-39P-201ENST00000362455 TUSC3Q13454 348 aa7.46□□□□□ -1.22
RNU4-39P-201ENST00000362455 SNX17Q15036 470 aa7.46□□□□□ -1.22
RNU4-39P-201ENST00000362455 SMAD2Q15796 467 aaKnown RBP7.46□□□□□ -1.22
RNU4-39P-201ENST00000362455 NFE2Q16621 373 aaPredicted RBP7.46□□□□□ -1.22
RNU4-39P-201ENST00000362455 ABCB5Q2M3G0 1257 aa7.46□□□□□ -1.22
RNU4-39P-201ENST00000362455 CBARPQ8N350 705 aaPredicted RBP7.46□□□□□ -1.22
RNU4-39P-201ENST00000362455 PHOSPHO1Q8TCT1 267 aa7.46□□□□□ -1.22
RNU4-39P-201ENST00000362455 AP5M1Q9H0R1 490 aa7.46□□□□□ -1.22
RNU4-39P-201ENST00000362455 TNFRSF12AQ9NP84 129 aa7.46□□□□□ -1.22
RNU4-39P-201ENST00000362455 KCNH7Q9NS40 1196 aa7.46□□□□□ -1.22
RNU4-39P-201ENST00000362455 ASH2LQ9UBL3 628 aa7.46□□□□□ -1.22
RNU4-39P-201ENST00000362455 ZNF652Q9Y2D9 606 aa7.46□□□□□ -1.22
RNU4-39P-201ENST00000362455 PCDHB4Q9Y5E5 795 aa7.46□□□□□ -1.22
RNU4-39P-201ENST00000362455 PREX1Q8TCU6 1659 aa7.46□□□□□ -1.22
RNU4-39P-201ENST00000362455 TNKSO95271 1327 aa7.46□□□□□ -1.22
RNU4-39P-201ENST00000362455 ZNF644Q9H582 1327 aaPredicted RBP7.46□□□□□ -1.22
RNU4-39P-201ENST00000362455 CLIP1P30622 1438 aa7.45□□□□□ -1.22
RNU4-39P-201ENST00000362455 NPATQ14207 1427 aa7.45□□□□□ -1.22
RNU4-39P-201ENST00000362455 PTPRKQ15262 1439 aa7.45□□□□□ -1.22
RNU4-39P-201ENST00000362455 CASKIN1Q8WXD9 1431 aa7.45□□□□□ -1.22
RNU4-39P-201ENST00000362455 CNTLNQ9NXG0 1405 aa7.45□□□□□ -1.22
RNU4-39P-201ENST00000362455 FAM90A27PA6NNH2 459 aa7.45□□□□□ -1.22
RNU4-39P-201ENST00000362455 SRGAP3O43295 1099 aa7.45□□□□□ -1.22
RNU4-39P-201ENST00000362455 HYAL3O43820 417 aaPredicted RBP7.45□□□□□ -1.22
RNU4-39P-201ENST00000362455 FBXO21O94952 628 aa7.45□□□□□ -1.22
RNU4-39P-201ENST00000362455 DBHP09172 617 aa7.45□□□□□ -1.22
RNU4-39P-201ENST00000362455 PTX3P26022 381 aaPredicted RBP7.45□□□□□ -1.22
RNU4-39P-201ENST00000362455 LSP1P33241 339 aa7.45□□□□□ -1.22
RNU4-39P-201ENST00000362455 RAB27AP51159 221 aa7.45□□□□□ -1.22
RNU4-39P-201ENST00000362455 PHC1P78364 1004 aa7.45□□□□□ -1.22
RNU4-39P-201ENST00000362455 TMEM132BQ14DG7 1078 aa7.45□□□□□ -1.22
RNU4-39P-201ENST00000362455 ZNF792Q3KQV3 632 aa7.45□□□□□ -1.22
RNU4-39P-201ENST00000362455 HSP90AB2PQ58FF8 381 aa7.45□□□□□ -1.22
RNU4-39P-201ENST00000362455 CCDC181Q5TID7 509 aa7.45□□□□□ -1.22
RNU4-39P-201ENST00000362455 CC2D1AQ6P1N0 951 aaPredicted RBP7.45□□□□□ -1.22
RNU4-39P-201ENST00000362455 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.45□□□□□ -1.22
RNU4-39P-201ENST00000362455 ZBTB46Q86UZ6 589 aa7.45□□□□□ -1.22
RNU4-39P-201ENST00000362455 CHMP4CQ96CF2 233 aa7.45□□□□□ -1.22
RNU4-39P-201ENST00000362455 MS4A5Q9H3V2 200 aa7.45□□□□□ -1.22
RNU4-39P-201ENST00000362455 ACSS2Q9NR19 701 aa7.45□□□□□ -1.22
RNU4-39P-201ENST00000362455 PALD1Q9ULE6 856 aa7.45□□□□□ -1.22
RNU4-39P-201ENST00000362455 SPEF1Q9Y4P9 236 aa7.45□□□□□ -1.22
RNU4-39P-201ENST00000362455 ABCC1P33527 1531 aa7.45□□□□□ -1.22
RNU4-39P-201ENST00000362455 GPATCH8Q9UKJ3 1502 aaKnown RBP7.45□□□□□ -1.22
RNU4-39P-201ENST00000362455 SPAG9O60271 1321 aaKnown RBP7.45□□□□□ -1.22
RNU4-39P-201ENST00000362455 SHTN1A0MZ66 631 aa7.44□□□□□ -1.22
RNU4-39P-201ENST00000362455 ZC3H12DA2A288 527 aaKnown RBP7.44□□□□□ -1.22
RNU4-39P-201ENST00000362455 AKAP10O43572 662 aa7.44□□□□□ -1.22
RNU4-39P-201ENST00000362455 BUB1BO60566 1050 aaPredicted RBP7.44□□□□□ -1.22
RNU4-39P-201ENST00000362455 CYBBP04839 570 aa7.44□□□□□ -1.22
RNU4-39P-201ENST00000362455 PTPN1P18031 435 aaKnown RBP7.44□□□□□ -1.22
RNU4-39P-201ENST00000362455 GJA4P35212 333 aa7.44□□□□□ -1.22
RNU4-39P-201ENST00000362455 IARSP41252 1262 aaKnown RBP7.44□□□□□ -1.22
RNU4-39P-201ENST00000362455 PPP2R5AQ15172 486 aa7.44□□□□□ -1.22
RNU4-39P-201ENST00000362455 INAVAQ3KP66 663 aa7.44□□□□□ -1.22
RNU4-39P-201ENST00000362455 GPR158Q5T848 1215 aa7.44□□□□□ -1.22
RNU4-39P-201ENST00000362455 BTBD8Q5XKL5 378 aa7.44□□□□□ -1.22
RNU4-39P-201ENST00000362455 GGT6Q6P531 493 aa7.44□□□□□ -1.22
RNU4-39P-201ENST00000362455 RASSF3Q86WH2 238 aa7.44□□□□□ -1.22
RNU4-39P-201ENST00000362455 CLEC4DQ8WXI8 215 aa7.44□□□□□ -1.22
RNU4-39P-201ENST00000362455 TSR2Q969E8 191 aaKnown RBP7.44□□□□□ -1.22
RNU4-39P-201ENST00000362455 HOOK2Q96ED9 719 aa7.44□□□□□ -1.22
RNU4-39P-201ENST00000362455 ZMAT4Q9H898 229 aa7.44□□□□□ -1.22
RNU4-39P-201ENST00000362455 RC3H2Q9HBD1 1191 aaKnown RBP7.44□□□□□ -1.22
RNU4-39P-201ENST00000362455 AASDHPPTQ9NRN7 309 aa7.44□□□□□ -1.22
RNU4-39P-201ENST00000362455 RIC8BQ9NVN3 520 aa7.44□□□□□ -1.22
RNU4-39P-201ENST00000362455 C14orf119Q9NWQ9 140 aa7.44□□□□□ -1.22
RNU4-39P-201ENST00000362455 NUDT5Q9UKK9 219 aa7.44□□□□□ -1.22
RNU4-39P-201ENST00000362455 TCOF1Q13428 1488 aaKnown RBP7.43□□□□□ -1.22
RNU4-39P-201ENST00000362455 IQSEC2Q5JU85 1478 aa7.43□□□□□ -1.22
RNU4-39P-201ENST00000362455 SAMD9LQ8IVG5 1584 aa7.43□□□□□ -1.22
RNU4-39P-201ENST00000362455 CAMSAP1Q5T5Y3 1602 aa7.43□□□□□ -1.22
RNU4-39P-201ENST00000362455 TCRBV5S2A0A599 114 aa7.43□□□□□ -1.22
RNU4-39P-201ENST00000362455 MT-CO1P00395 513 aa7.43□□□□□ -1.22
RNU4-39P-201ENST00000362455 C4BPAP04003 597 aaKnown RBP7.43□□□□□ -1.22
RNU4-39P-201ENST00000362455 CYP17A1P05093 508 aa7.43□□□□□ -1.22
RNU4-39P-201ENST00000362455 MYBL2P10244 700 aa7.43□□□□□ -1.22
RNU4-39P-201ENST00000362455 HSPA1LP34931 641 aa7.43□□□□□ -1.22
RNU4-39P-201ENST00000362455 KLF1Q13351 362 aaPredicted RBP7.43□□□□□ -1.22
RNU4-39P-201ENST00000362455 LRRC41Q15345 812 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms