RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 TRIM71Q2Q1W2 868 aaKnown RBP21.61■■□□□ 1.05
SYNE4-202ENST00000340477 ZNF484Q5JVG2 852 aa21.61■■□□□ 1.05
SYNE4-202ENST00000340477 ZNF618Q5T7W0 954 aa21.61■■□□□ 1.05
SYNE4-202ENST00000340477 ZBBXA8MT70 800 aa21.6■■□□□ 1.05
SYNE4-202ENST00000340477 DKC1O60832 514 aaKnown RBP eCLIP21.6■■□□□ 1.05
SYNE4-202ENST00000340477 TRAPPC10P48553 1259 aa21.6■■□□□ 1.05
SYNE4-202ENST00000340477 ADAM17P78536 824 aa21.6■■□□□ 1.05
SYNE4-202ENST00000340477 PPP2R5CQ13362 524 aa21.6■■□□□ 1.05
SYNE4-202ENST00000340477 MCTP1Q6DN14 999 aa21.6■■□□□ 1.05
SYNE4-202ENST00000340477 HERVK_113Q902F9 699 aa21.6■■□□□ 1.05
SYNE4-202ENST00000340477 WNT8BQ93098 351 aa21.6■■□□□ 1.05
SYNE4-202ENST00000340477 NRBP2Q9NSY0 501 aa21.6■■□□□ 1.05
SYNE4-202ENST00000340477 MBLAC1A4D2B0 266 aaPredicted RBP21.59■■□□□ 1.05
SYNE4-202ENST00000340477 M0QZ92 97 aa21.59■■□□□ 1.05
SYNE4-202ENST00000340477 CTSHP09668 335 aa21.59■■□□□ 1.05
SYNE4-202ENST00000340477 PRKCEQ02156 737 aa21.59■■□□□ 1.05
SYNE4-202ENST00000340477 C16orf59Q7L2K0 433 aa21.59■■□□□ 1.05
SYNE4-202ENST00000340477 OTOP2Q7RTS6 562 aa21.59■■□□□ 1.05
SYNE4-202ENST00000340477 OATP04181 439 aa21.58■■□□□ 1.05
SYNE4-202ENST00000340477 MCM7P33993 719 aa21.58■■□□□ 1.05
SYNE4-202ENST00000340477 NCAPH2Q6IBW4 605 aa21.58■■□□□ 1.05
SYNE4-202ENST00000340477 TRMT1LQ7Z2T5 733 aaKnown RBP21.58■■□□□ 1.05
SYNE4-202ENST00000340477 FAM49AQ9H0Q0 323 aaPredicted RBP21.58■■□□□ 1.05
SYNE4-202ENST00000340477 VAV3Q9UKW4 847 aa21.58■■□□□ 1.05
SYNE4-202ENST00000340477 PCDHA2Q9Y5H9 948 aa21.58■■□□□ 1.05
SYNE4-202ENST00000340477 K7ELQ4 463 aaPredicted RBP21.57■■□□□ 1.04
SYNE4-202ENST00000340477 BAIAP3O94812 1187 aa21.57■■□□□ 1.04
SYNE4-202ENST00000340477 PDCP20941 246 aa21.57■■□□□ 1.04
SYNE4-202ENST00000340477 U2AF2P26368 475 aaKnown RBP eCLIP21.57■■□□□ 1.04
SYNE4-202ENST00000340477 CUL4AQ13619 759 aa21.57■■□□□ 1.04
SYNE4-202ENST00000340477 TTC38Q5R3I4 469 aa21.57■■□□□ 1.04
SYNE4-202ENST00000340477 MARCH8Q5T0T0 291 aa21.57■■□□□ 1.04
SYNE4-202ENST00000340477 LARP1BQ659C4 914 aaKnown RBP21.57■■□□□ 1.04
SYNE4-202ENST00000340477 CNKSR3Q6P9H4 555 aa21.57■■□□□ 1.04
SYNE4-202ENST00000340477 MTHFD1LQ6UB35 978 aa21.57■■□□□ 1.04
SYNE4-202ENST00000340477 B3GNT9Q6UX72 402 aa21.57■■□□□ 1.04
SYNE4-202ENST00000340477 RUFY4Q6ZNE9 571 aa21.57■■□□□ 1.04
SYNE4-202ENST00000340477 RPAINQ86UA6 219 aa21.57■■□□□ 1.04
SYNE4-202ENST00000340477 HSCBQ8IWL3 235 aa21.57■■□□□ 1.04
SYNE4-202ENST00000340477 TRAPPC12Q8WVT3 735 aa21.57■■□□□ 1.04
SYNE4-202ENST00000340477 HAS1Q92839 578 aa21.57■■□□□ 1.04
SYNE4-202ENST00000340477 PCDHA12Q9UN75 941 aa21.57■■□□□ 1.04
SYNE4-202ENST00000340477 SLC4A7Q9Y6M7 1214 aa21.57■■□□□ 1.04
SYNE4-202ENST00000340477 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.56■■□□□ 1.04
SYNE4-202ENST00000340477 SMIM35A0A1B0GVV1 85 aa21.56■■□□□ 1.04
SYNE4-202ENST00000340477 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.56■■□□□ 1.04
SYNE4-202ENST00000340477 EFCAB14O75071 495 aa21.56■■□□□ 1.04
SYNE4-202ENST00000340477 KCNJ6P48051 423 aa21.56■■□□□ 1.04
SYNE4-202ENST00000340477 PSMC5P62195 406 aa21.56■■□□□ 1.04
SYNE4-202ENST00000340477 SMAD3P84022 425 aaKnown RBP21.56■■□□□ 1.04
SYNE4-202ENST00000340477 IER5Q5VY09 327 aa21.56■■□□□ 1.04
SYNE4-202ENST00000340477 DNAJB3Q8WWF6 145 aa21.56■■□□□ 1.04
SYNE4-202ENST00000340477 SEPT9Q9UHD8 586 aaPredicted RBP21.56■■□□□ 1.04
SYNE4-202ENST00000340477 KIF28PB7ZC32 967 aa21.55■■□□□ 1.04
SYNE4-202ENST00000340477 SOX1O00570 391 aaPredicted RBP21.55■■□□□ 1.04
SYNE4-202ENST00000340477 MAGEB2O15479 319 aa21.55■■□□□ 1.04
SYNE4-202ENST00000340477 CXCL10P02778 98 aa21.55■■□□□ 1.04
SYNE4-202ENST00000340477 ATP4AP20648 1035 aa21.55■■□□□ 1.04
SYNE4-202ENST00000340477 KLRC1P26715 233 aa21.55■■□□□ 1.04
SYNE4-202ENST00000340477 TXKP42681 527 aa21.55■■□□□ 1.04
SYNE4-202ENST00000340477 QARSP47897 775 aaKnown RBP21.55■■□□□ 1.04
SYNE4-202ENST00000340477 MRPS6P82932 125 aaKnown RBP21.55■■□□□ 1.04
SYNE4-202ENST00000340477 XKR3Q5GH77 459 aa21.55■■□□□ 1.04
SYNE4-202ENST00000340477 GPR153Q6NV75 609 aa21.55■■□□□ 1.04
SYNE4-202ENST00000340477 BANK1Q8NDB2 785 aa21.55■■□□□ 1.04
SYNE4-202ENST00000340477 LRCH3Q96II8 777 aa21.55■■□□□ 1.04
SYNE4-202ENST00000340477 TTC12Q9H892 705 aaPredicted RBP21.55■■□□□ 1.04
SYNE4-202ENST00000340477 NBNO60934 754 aa21.54■■□□□ 1.04
SYNE4-202ENST00000340477 P4HBP07237 508 aaKnown RBP21.54■■□□□ 1.04
SYNE4-202ENST00000340477 OR52Z1P0C646 297 aa21.54■■□□□ 1.04
SYNE4-202ENST00000340477 TMOD1P28289 359 aa21.54■■□□□ 1.04
SYNE4-202ENST00000340477 EPHA7Q15375 998 aa21.54■■□□□ 1.04
SYNE4-202ENST00000340477 ZNF174Q15697 407 aa21.54■■□□□ 1.04
SYNE4-202ENST00000340477 UGCGQ16739 394 aa21.54■■□□□ 1.04
SYNE4-202ENST00000340477 TMEM266Q2M3C6 531 aa21.54■■□□□ 1.04
SYNE4-202ENST00000340477 FAM26DQ5JW98 314 aa21.54■■□□□ 1.04
SYNE4-202ENST00000340477 RASIP1Q5U651 963 aa21.54■■□□□ 1.04
SYNE4-202ENST00000340477 TRAF7Q6Q0C0 670 aa21.54■■□□□ 1.04
SYNE4-202ENST00000340477 NME8Q8N427 588 aa21.54■■□□□ 1.04
SYNE4-202ENST00000340477 METTL13Q8N6R0 699 aa21.54■■□□□ 1.04
SYNE4-202ENST00000340477 SEPT8Q92599 483 aa21.54■■□□□ 1.04
SYNE4-202ENST00000340477 INTS4Q96HW7 963 aaKnown RBP21.54■■□□□ 1.04
SYNE4-202ENST00000340477 ZNF862O60290 1169 aa21.53■■□□□ 1.04
SYNE4-202ENST00000340477 TBC1D8BQ0IIM8 1120 aa21.53■■□□□ 1.04
SYNE4-202ENST00000340477 IKBKEQ14164 716 aa21.53■■□□□ 1.04
SYNE4-202ENST00000340477 RILPL1Q5EBL4 403 aa21.53■■□□□ 1.04
SYNE4-202ENST00000340477 NEK9Q8TD19 979 aa21.53■■□□□ 1.04
SYNE4-202ENST00000340477 SNX21Q969T3 373 aa21.53■■□□□ 1.04
SYNE4-202ENST00000340477 MAP7D2Q96T17 732 aa21.53■■□□□ 1.04
SYNE4-202ENST00000340477 SLC9A7Q96T83 725 aa21.53■■□□□ 1.04
SYNE4-202ENST00000340477 CXXC1Q9P0U4 656 aaPredicted RBP21.53■■□□□ 1.04
SYNE4-202ENST00000340477 TRPV2Q9Y5S1 764 aa21.53■■□□□ 1.04
SYNE4-202ENST00000340477 TET1Q8NFU7 2136 aa21.53■■□□□ 1.04
SYNE4-202ENST00000340477 EVPLQ92817 2033 aa21.53■■□□□ 1.04
SYNE4-202ENST00000340477 ABHD14A-ACY1A0A1B0GW23 586 aa21.52■■□□□ 1.04
SYNE4-202ENST00000340477 DDX11L8A8MPP1 907 aa21.52■■□□□ 1.04
SYNE4-202ENST00000340477 EML1O00423 815 aa21.52■■□□□ 1.04
SYNE4-202ENST00000340477 WNT7AO00755 349 aa21.52■■□□□ 1.04
SYNE4-202ENST00000340477 C22orf31O95567 290 aa21.52■■□□□ 1.04
SYNE4-202ENST00000340477 HSP90AA1P07900 732 aaKnown RBP21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms