RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 TEX2Q8IWB9 1127 aa19.91■□□□□ 0.78
EXOSC4-201ENST00000316052 GJD3Q8N144 294 aa19.91■□□□□ 0.78
EXOSC4-201ENST00000316052 PADI3Q9ULW8 664 aa19.91■□□□□ 0.78
EXOSC4-201ENST00000316052 TRPV2Q9Y5S1 764 aa19.91■□□□□ 0.78
EXOSC4-201ENST00000316052 IGKV6D-21A0A0A0MT36 114 aa19.9■□□□□ 0.78
EXOSC4-201ENST00000316052 POTEB3A0JP26 581 aa19.9■□□□□ 0.78
EXOSC4-201ENST00000316052 FAM86B1E9PN63 330 aa19.9■□□□□ 0.78
EXOSC4-201ENST00000316052 DDX39AO00148 427 aaKnown RBP19.9■□□□□ 0.78
EXOSC4-201ENST00000316052 FAM86B2P0C5J1 330 aa19.9■□□□□ 0.78
EXOSC4-201ENST00000316052 LTBRP36941 435 aa19.9■□□□□ 0.78
EXOSC4-201ENST00000316052 AP3B2Q13367 1082 aa19.9■□□□□ 0.78
EXOSC4-201ENST00000316052 BTG3Q14201 252 aaPredicted RBP19.9■□□□□ 0.78
EXOSC4-201ENST00000316052 TMEM31Q5JXX7 168 aa19.9■□□□□ 0.78
EXOSC4-201ENST00000316052 JAKMIP3Q5VZ66 844 aa19.9■□□□□ 0.78
EXOSC4-201ENST00000316052 POTEBQ6S5H4 581 aa19.9■□□□□ 0.78
EXOSC4-201ENST00000316052 MTHFD1LQ6UB35 978 aa19.9■□□□□ 0.78
EXOSC4-201ENST00000316052 ABHD15Q6UXT9 468 aa19.9■□□□□ 0.78
EXOSC4-201ENST00000316052 EP400NLQ6ZTU2 488 aa19.9■□□□□ 0.78
EXOSC4-201ENST00000316052 UIMC1Q96RL1 719 aa19.9■□□□□ 0.78
EXOSC4-201ENST00000316052 CELF4Q9BZC1 486 aaKnown RBP19.9■□□□□ 0.78
EXOSC4-201ENST00000316052 SQORQ9Y6N5 450 aa19.9■□□□□ 0.78
EXOSC4-201ENST00000316052 FAM86C2PA6NEL3 165 aa19.89■□□□□ 0.77
EXOSC4-201ENST00000316052 hCG_1984214I3L0E3 225 aa19.89■□□□□ 0.77
EXOSC4-201ENST00000316052 DHX15O43143 795 aaKnown RBP19.89■□□□□ 0.77
EXOSC4-201ENST00000316052 RPLP2P05387 115 aaKnown RBP19.89■□□□□ 0.77
EXOSC4-201ENST00000316052 ZNF76P36508 570 aa19.89■□□□□ 0.77
EXOSC4-201ENST00000316052 CENPQQ7L2Z9 268 aaPredicted RBP19.89■□□□□ 0.77
EXOSC4-201ENST00000316052 ZNF713Q8N859 430 aaPredicted RBP19.89■□□□□ 0.77
EXOSC4-201ENST00000316052 CRYGNQ8WXF5 182 aa19.89■□□□□ 0.77
EXOSC4-201ENST00000316052 TNPO1Q92973 898 aaKnown RBP19.89■□□□□ 0.77
EXOSC4-201ENST00000316052 C11orf84Q9BUA3 381 aaPredicted RBP19.89■□□□□ 0.77
EXOSC4-201ENST00000316052 TMX1Q9H3N1 280 aa19.89■□□□□ 0.77
EXOSC4-201ENST00000316052 IGSF9BQ9UPX0 1349 aa19.89■□□□□ 0.77
EXOSC4-201ENST00000316052 MYH9P35579 1960 aaKnown RBP19.88■□□□□ 0.77
EXOSC4-201ENST00000316052 SMIM35A0A1B0GVV1 85 aa19.88■□□□□ 0.77
EXOSC4-201ENST00000316052 GPR37L1O60883 481 aa19.88■□□□□ 0.77
EXOSC4-201ENST00000316052 KLRC1P26715 233 aa19.88■□□□□ 0.77
EXOSC4-201ENST00000316052 CAMK1Q14012 370 aa19.88■□□□□ 0.77
EXOSC4-201ENST00000316052 KRT32Q14532 448 aa19.88■□□□□ 0.77
EXOSC4-201ENST00000316052 PFKFB3Q16875 520 aaPredicted RBP19.88■□□□□ 0.77
EXOSC4-201ENST00000316052 PUS10Q3MIT2 529 aaKnown RBP19.88■□□□□ 0.77
EXOSC4-201ENST00000316052 NIPA1Q7RTP0 329 aa19.88■□□□□ 0.77
EXOSC4-201ENST00000316052 PLA2G4DQ86XP0 818 aa19.88■□□□□ 0.77
EXOSC4-201ENST00000316052 FTHL17Q9BXU8 183 aa19.88■□□□□ 0.77
EXOSC4-201ENST00000316052 LMAN2LQ9H0V9 348 aa19.88■□□□□ 0.77
EXOSC4-201ENST00000316052 GLT8D2Q9H1C3 349 aa19.88■□□□□ 0.77
EXOSC4-201ENST00000316052 CDHR5Q9HBB8 845 aa19.88■□□□□ 0.77
EXOSC4-201ENST00000316052 ALG13Q9NP73 1137 aaKnown RBP19.88■□□□□ 0.77
EXOSC4-201ENST00000316052 CLDND1Q9NY35 253 aa19.88■□□□□ 0.77
EXOSC4-201ENST00000316052 NAP1L2Q9ULW6 460 aaPredicted RBP19.88■□□□□ 0.77
EXOSC4-201ENST00000316052 RWDD3Q9Y3V2 267 aa19.88■□□□□ 0.77
EXOSC4-201ENST00000316052 MRPL42Q9Y6G3 142 aaKnown RBP19.88■□□□□ 0.77
EXOSC4-201ENST00000316052 KDM3AQ9Y4C1 1321 aa19.87■□□□□ 0.77
EXOSC4-201ENST00000316052 IGLV3-22A0A075B6J6 115 aa19.87■□□□□ 0.77
EXOSC4-201ENST00000316052 M0QZ92 97 aa19.87■□□□□ 0.77
EXOSC4-201ENST00000316052 CDC45O75419 566 aa19.87■□□□□ 0.77
EXOSC4-201ENST00000316052 CYP3A4P08684 503 aa19.87■□□□□ 0.77
EXOSC4-201ENST00000316052 ATP4AP20648 1035 aa19.87■□□□□ 0.77
EXOSC4-201ENST00000316052 GTF2F1P35269 517 aaKnown RBP eCLIP19.87■□□□□ 0.77
EXOSC4-201ENST00000316052 SLC26A2P50443 739 aa19.87■□□□□ 0.77
EXOSC4-201ENST00000316052 RCAN1P53805 252 aa19.87■□□□□ 0.77
EXOSC4-201ENST00000316052 KRT76Q01546 638 aa19.87■□□□□ 0.77
EXOSC4-201ENST00000316052 DLX2Q07687 328 aaPredicted RBP19.87■□□□□ 0.77
EXOSC4-201ENST00000316052 APOBRQ0VD83 1088 aa19.87■□□□□ 0.77
EXOSC4-201ENST00000316052 HYAL1Q12794 435 aa19.87■□□□□ 0.77
EXOSC4-201ENST00000316052 PAK2Q13177 524 aa19.87■□□□□ 0.77
EXOSC4-201ENST00000316052 TMEM266Q2M3C6 531 aa19.87■□□□□ 0.77
EXOSC4-201ENST00000316052 CTC1Q2NKJ3 1217 aa19.87■□□□□ 0.77
EXOSC4-201ENST00000316052 NPAS4Q8IUM7 802 aa19.87■□□□□ 0.77
EXOSC4-201ENST00000316052 CCDC60Q8IWA6 550 aaPredicted RBP19.87■□□□□ 0.77
EXOSC4-201ENST00000316052 KIAA0319LQ8IZA0 1049 aa19.87■□□□□ 0.77
EXOSC4-201ENST00000316052 NME8Q8N427 588 aa19.87■□□□□ 0.77
EXOSC4-201ENST00000316052 ATP8B4Q8TF62 1192 aa19.87■□□□□ 0.77
EXOSC4-201ENST00000316052 KCNB2Q92953 911 aa19.87■□□□□ 0.77
EXOSC4-201ENST00000316052 PLAGL2Q9UPG8 496 aa19.87■□□□□ 0.77
EXOSC4-201ENST00000316052 KIAA1671Q9BY89 1806 aa19.87■□□□□ 0.77
EXOSC4-201ENST00000316052 MUC6Q6W4X9 2439 aa19.87■□□□□ 0.77
EXOSC4-201ENST00000316052 ZBTB42B2RXF5 422 aa19.86■□□□□ 0.77
EXOSC4-201ENST00000316052 BACH1O14867 736 aa19.86■□□□□ 0.77
EXOSC4-201ENST00000316052 HBP1O60381 514 aa19.86■□□□□ 0.77
EXOSC4-201ENST00000316052 CSPG5O95196 566 aa19.86■□□□□ 0.77
EXOSC4-201ENST00000316052 HMGB1P09429 215 aaKnown RBP19.86■□□□□ 0.77
EXOSC4-201ENST00000316052 SCG2P13521 617 aa19.86■□□□□ 0.77
EXOSC4-201ENST00000316052 DNAJB1P25685 340 aa19.86■□□□□ 0.77
EXOSC4-201ENST00000316052 SSTR3P32745 418 aaPredicted RBP19.86■□□□□ 0.77
EXOSC4-201ENST00000316052 PLA2G5P39877 138 aa19.86■□□□□ 0.77
EXOSC4-201ENST00000316052 GATMP50440 423 aa19.86■□□□□ 0.77
EXOSC4-201ENST00000316052 PKN1Q16512 942 aa19.86■□□□□ 0.77
EXOSC4-201ENST00000316052 SWSAP1Q6NVH7 229 aa19.86■□□□□ 0.77
EXOSC4-201ENST00000316052 Q6ZUG5 572 aa19.86■□□□□ 0.77
EXOSC4-201ENST00000316052 CMTR2Q8IYT2 770 aaKnown RBP19.86■□□□□ 0.77
EXOSC4-201ENST00000316052 PLVAPQ9BX97 442 aa19.86■□□□□ 0.77
EXOSC4-201ENST00000316052 IPO5O00410 1097 aaKnown RBP19.85■□□□□ 0.77
EXOSC4-201ENST00000316052 MGEA5O60502 916 aa19.85■□□□□ 0.77
EXOSC4-201ENST00000316052 MMP1P03956 469 aa19.85■□□□□ 0.77
EXOSC4-201ENST00000316052 METAP2P50579 478 aaKnown RBP eCLIP19.85■□□□□ 0.77
EXOSC4-201ENST00000316052 PAN2Q504Q3 1202 aaKnown RBP19.85■□□□□ 0.77
EXOSC4-201ENST00000316052 FAM160B1Q5W0V3 765 aa19.85■□□□□ 0.77
EXOSC4-201ENST00000316052 SPPL3Q8TCT6 385 aa19.85■□□□□ 0.77
EXOSC4-201ENST00000316052 ZMYND12Q9H0C1 365 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms