RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 FBXO47Q5MNV8 452 aa22.17■■□□□ 1.14
LIME1-201ENST00000309546 ABHD15Q6UXT9 468 aa22.17■■□□□ 1.14
LIME1-201ENST00000309546 CCDC60Q8IWA6 550 aaPredicted RBP22.17■■□□□ 1.14
LIME1-201ENST00000309546 C17orf80Q9BSJ5 609 aa22.17■■□□□ 1.14
LIME1-201ENST00000309546 ZNF302Q9NR11 478 aa22.17■■□□□ 1.14
LIME1-201ENST00000309546 TCEAL9Q9UHQ7 104 aa22.17■■□□□ 1.14
LIME1-201ENST00000309546 TRANK1O15050 2925 aa22.16■■□□□ 1.14
LIME1-201ENST00000309546 DHX15O43143 795 aaKnown RBP22.16■■□□□ 1.14
LIME1-201ENST00000309546 RPLP2P05387 115 aaKnown RBP22.16■■□□□ 1.14
LIME1-201ENST00000309546 SLC26A2P50443 739 aa22.16■■□□□ 1.14
LIME1-201ENST00000309546 NLRP5P59047 1200 aa22.16■■□□□ 1.14
LIME1-201ENST00000309546 SSRP1Q08945 709 aaKnown RBP22.16■■□□□ 1.14
LIME1-201ENST00000309546 MIS18BP1Q6P0N0 1132 aa22.16■■□□□ 1.14
LIME1-201ENST00000309546 PDXDC2PQ6P474 469 aa22.16■■□□□ 1.14
LIME1-201ENST00000309546 TSHZ1Q6ZSZ6 1077 aa22.16■■□□□ 1.14
LIME1-201ENST00000309546 FBXO22Q8NEZ5 403 aa22.16■■□□□ 1.14
LIME1-201ENST00000309546 PPP4R2Q9NY27 417 aa22.16■■□□□ 1.14
LIME1-201ENST00000309546 TRPV2Q9Y5S1 764 aa22.16■■□□□ 1.14
LIME1-201ENST00000309546 IGKV6D-21A0A0A0MT36 114 aa22.15■■□□□ 1.14
LIME1-201ENST00000309546 TFF2Q03403 129 aa22.15■■□□□ 1.14
LIME1-201ENST00000309546 IER5Q5VY09 327 aa22.15■■□□□ 1.14
LIME1-201ENST00000309546 SWSAP1Q6NVH7 229 aa22.15■■□□□ 1.14
LIME1-201ENST00000309546 CKAP2LQ8IYA6 745 aa22.15■■□□□ 1.14
LIME1-201ENST00000309546 SP7Q8TDD2 431 aaPredicted RBP22.15■■□□□ 1.14
LIME1-201ENST00000309546 TM6SF1Q9BZW5 370 aa22.15■■□□□ 1.14
LIME1-201ENST00000309546 TBC1D22BQ9NU19 505 aa22.15■■□□□ 1.14
LIME1-201ENST00000309546 PDRG1Q9NUG6 133 aa22.15■■□□□ 1.14
LIME1-201ENST00000309546 PCDHA2Q9Y5H9 948 aa22.15■■□□□ 1.14
LIME1-201ENST00000309546 TCF20Q9UGU0 1960 aaKnown RBP22.15■■□□□ 1.14
LIME1-201ENST00000309546 WDR81Q562E7 1941 aa22.15■■□□□ 1.14
LIME1-201ENST00000309546 REV3LO60673 3130 aa22.15■■□□□ 1.14
LIME1-201ENST00000309546 EVPLQ92817 2033 aa22.14■■□□□ 1.14
LIME1-201ENST00000309546 RALGAPA2Q2PPJ7 1873 aa22.14■■□□□ 1.13
LIME1-201ENST00000309546 HBP1O60381 514 aa22.14■■□□□ 1.13
LIME1-201ENST00000309546 CD52P31358 61 aa22.14■■□□□ 1.13
LIME1-201ENST00000309546 MTHFD1LQ6UB35 978 aa22.14■■□□□ 1.13
LIME1-201ENST00000309546 TRMT1LQ7Z2T5 733 aaKnown RBP22.14■■□□□ 1.13
LIME1-201ENST00000309546 ADAMTS19Q8TE59 1207 aa22.14■■□□□ 1.13
LIME1-201ENST00000309546 ATP8B4Q8TF62 1192 aa22.14■■□□□ 1.13
LIME1-201ENST00000309546 AGO3Q9H9G7 860 aaKnown RBP22.14■■□□□ 1.13
LIME1-201ENST00000309546 SAMM50Q9Y512 469 aa22.14■■□□□ 1.13
LIME1-201ENST00000309546 KLRC1P26715 233 aa22.13■■□□□ 1.13
LIME1-201ENST00000309546 ZNF746Q6NUN9 644 aaPredicted RBP22.13■■□□□ 1.13
LIME1-201ENST00000309546 CPLX2Q6PUV4 134 aaKnown RBP22.13■■□□□ 1.13
LIME1-201ENST00000309546 ZNF274Q96GC6 653 aaPredicted RBP22.13■■□□□ 1.13
LIME1-201ENST00000309546 SH3GLB2Q9NR46 395 aa22.13■■□□□ 1.13
LIME1-201ENST00000309546 COL4A6Q14031 1691 aa22.13■■□□□ 1.13
LIME1-201ENST00000309546 SMIM35A0A1B0GVV1 85 aa22.12■■□□□ 1.13
LIME1-201ENST00000309546 DEXIO95424 95 aa22.12■■□□□ 1.13
LIME1-201ENST00000309546 CIITAP33076 1130 aa22.12■■□□□ 1.13
LIME1-201ENST00000309546 KRT76Q01546 638 aa22.12■■□□□ 1.13
LIME1-201ENST00000309546 EPC2Q52LR7 807 aa22.12■■□□□ 1.13
LIME1-201ENST00000309546 SMAP1Q8IYB5 467 aaPredicted RBP22.12■■□□□ 1.13
LIME1-201ENST00000309546 LMCD1Q9NZU5 365 aa22.12■■□□□ 1.13
LIME1-201ENST00000309546 GINS2Q9Y248 185 aa22.12■■□□□ 1.13
LIME1-201ENST00000309546 SPTBN5Q9NRC6 3674 aaKnown RBP22.12■■□□□ 1.13
LIME1-201ENST00000309546 COL1A2P08123 1366 aa22.12■■□□□ 1.13
LIME1-201ENST00000309546 ENPP3O14638 875 aa22.11■■□□□ 1.13
LIME1-201ENST00000309546 PSAPP07602 524 aa22.11■■□□□ 1.13
LIME1-201ENST00000309546 PAK2Q13177 524 aa22.11■■□□□ 1.13
LIME1-201ENST00000309546 AAK1Q2M2I8 961 aa22.11■■□□□ 1.13
LIME1-201ENST00000309546 LENG9Q96B70 501 aa22.11■■□□□ 1.13
LIME1-201ENST00000309546 IL17RAQ96F46 866 aa22.11■■□□□ 1.13
LIME1-201ENST00000309546 AIFM3Q96NN9 605 aa22.11■■□□□ 1.13
LIME1-201ENST00000309546 SAMD11Q96NU1 681 aa22.11■■□□□ 1.13
LIME1-201ENST00000309546 CELF4Q9BZC1 486 aaKnown RBP22.11■■□□□ 1.13
LIME1-201ENST00000309546 GABBR1Q9UBS5 961 aa22.11■■□□□ 1.13
LIME1-201ENST00000309546 PCDHA4Q9UN74 947 aa22.11■■□□□ 1.13
LIME1-201ENST00000309546 TTC3P53804 2025 aa22.11■■□□□ 1.13
LIME1-201ENST00000309546 IGSF9BQ9UPX0 1349 aa22.1■■□□□ 1.13
LIME1-201ENST00000309546 ATP4AP20648 1035 aa22.1■■□□□ 1.13
LIME1-201ENST00000309546 KCNQ1P51787 676 aa22.1■■□□□ 1.13
LIME1-201ENST00000309546 ZNF484Q5JVG2 852 aa22.1■■□□□ 1.13
LIME1-201ENST00000309546 FIBCD1Q8N539 461 aa22.1■■□□□ 1.13
LIME1-201ENST00000309546 TBCKQ8TEA7 893 aa22.1■■□□□ 1.13
LIME1-201ENST00000309546 PPP1R16BQ96T49 567 aa22.1■■□□□ 1.13
LIME1-201ENST00000309546 COG5Q9UP83 839 aa22.1■■□□□ 1.13
LIME1-201ENST00000309546 PCDHA10Q9Y5I2 948 aa22.1■■□□□ 1.13
LIME1-201ENST00000309546 ADGRA3Q8IWK6 1321 aa22.09■■□□□ 1.13
LIME1-201ENST00000309546 MSH4O15457 936 aa22.09■■□□□ 1.13
LIME1-201ENST00000309546 CHMP2AO43633 222 aa22.09■■□□□ 1.13
LIME1-201ENST00000309546 TMEM266Q2M3C6 531 aa22.09■■□□□ 1.13
LIME1-201ENST00000309546 TMEM192Q8IY95 271 aa22.09■■□□□ 1.13
LIME1-201ENST00000309546 BLIDQ8IZY5 108 aa22.09■■□□□ 1.13
LIME1-201ENST00000309546 NME8Q8N427 588 aa22.09■■□□□ 1.13
LIME1-201ENST00000309546 LINC01599Q8WXQ3 324 aa22.09■■□□□ 1.13
LIME1-201ENST00000309546 BBXQ8WY36 941 aaPredicted RBP22.09■■□□□ 1.13
LIME1-201ENST00000309546 HLA-CQ95604 372 aa22.09■■□□□ 1.13
LIME1-201ENST00000309546 UHRF1Q96T88 793 aaPredicted RBP22.09■■□□□ 1.13
LIME1-201ENST00000309546 PADI3Q9ULW8 664 aa22.09■■□□□ 1.13
LIME1-201ENST00000309546 MAFBQ9Y5Q3 323 aaPredicted RBP22.09■■□□□ 1.13
LIME1-201ENST00000309546 SQORQ9Y6N5 450 aa22.09■■□□□ 1.13
LIME1-201ENST00000309546 WDR64B1ANS9 1081 aa22.08■■□□□ 1.13
LIME1-201ENST00000309546 TNFRSF10AO00220 468 aa22.08■■□□□ 1.13
LIME1-201ENST00000309546 GAS7O60861 476 aa22.08■■□□□ 1.13
LIME1-201ENST00000309546 IBSPP21815 317 aaPredicted RBP22.08■■□□□ 1.13
LIME1-201ENST00000309546 CTNNB1P35222 781 aa22.08■■□□□ 1.13
LIME1-201ENST00000309546 USP11P51784 963 aa22.08■■□□□ 1.13
LIME1-201ENST00000309546 SCRN1Q12765 414 aa22.08■■□□□ 1.13
LIME1-201ENST00000309546 GPM6BQ13491 265 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms