RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 GUCY1A3Q02108 690 aa15.93■□□□□ 0.14
SCN3B-201ENST00000299333 SLC38A10Q9HBR0 1119 aa15.93■□□□□ 0.14
SCN3B-201ENST00000299333 SFMBT1Q9UHJ3 866 aa15.93■□□□□ 0.14
SCN3B-201ENST00000299333 GGT7Q9UJ14 662 aa15.93■□□□□ 0.14
SCN3B-201ENST00000299333 IVNS1ABPQ9Y6Y0 642 aa15.93■□□□□ 0.14
SCN3B-201ENST00000299333 STXBP3O00186 592 aa15.93■□□□□ 0.14
SCN3B-201ENST00000299333 PARP10Q53GL7 1025 aa15.93■□□□□ 0.14
SCN3B-201ENST00000299333 TEDDM1Q5T9Z0 273 aa15.93■□□□□ 0.14
SCN3B-201ENST00000299333 SPDYE1Q8NFV5 336 aaPredicted RBP15.93■□□□□ 0.14
SCN3B-201ENST00000299333 RHOBTB1O94844 696 aa15.92■□□□□ 0.14
SCN3B-201ENST00000299333 SEC24DO94855 1032 aaPredicted RBP15.92■□□□□ 0.14
SCN3B-201ENST00000299333 PDE6AP16499 860 aa15.92■□□□□ 0.14
SCN3B-201ENST00000299333 KIF23Q02241 960 aaPredicted RBP15.92■□□□□ 0.14
SCN3B-201ENST00000299333 MLXIPQ9HAP2 919 aa15.92■□□□□ 0.14
SCN3B-201ENST00000299333 POTEB3A0JP26 581 aa15.92■□□□□ 0.14
SCN3B-201ENST00000299333 POLR2MP0CAP2 368 aa15.92■□□□□ 0.14
SCN3B-201ENST00000299333 POTEBQ6S5H4 581 aa15.92■□□□□ 0.14
SCN3B-201ENST00000299333 ACAD11Q709F0 780 aa15.92■□□□□ 0.14
SCN3B-201ENST00000299333 HACE1Q8IYU2 909 aa15.92■□□□□ 0.14
SCN3B-201ENST00000299333 OMA1Q96E52 524 aa15.92■□□□□ 0.14
SCN3B-201ENST00000299333 ATP6V1G3Q96LB4 118 aa15.92■□□□□ 0.14
SCN3B-201ENST00000299333 NDST4Q9H3R1 872 aa15.92■□□□□ 0.14
SCN3B-201ENST00000299333 KIF9Q9HAQ2 790 aa15.92■□□□□ 0.14
SCN3B-201ENST00000299333 HOXB7P09629 217 aa15.92■□□□□ 0.14
SCN3B-201ENST00000299333 ARL4AP40617 200 aa15.92■□□□□ 0.14
SCN3B-201ENST00000299333 ALKBH5Q6P6C2 394 aaKnown RBP15.92■□□□□ 0.14
SCN3B-201ENST00000299333 CNBD1Q8NA66 436 aa15.92■□□□□ 0.14
SCN3B-201ENST00000299333 SSH3Q8TE77 659 aa15.92■□□□□ 0.14
SCN3B-201ENST00000299333 MAP4K1Q92918 833 aa15.92■□□□□ 0.14
SCN3B-201ENST00000299333 ADPGKQ9BRR6 497 aa15.92■□□□□ 0.14
SCN3B-201ENST00000299333 COPG1Q9Y678 874 aaKnown RBP15.92■□□□□ 0.14
SCN3B-201ENST00000299333 POLGP54098 1239 aaPredicted RBP15.92■□□□□ 0.14
SCN3B-201ENST00000299333 KLC3Q6P597 504 aa15.92■□□□□ 0.14
SCN3B-201ENST00000299333 BTN2A1Q7KYR7 527 aa15.92■□□□□ 0.14
SCN3B-201ENST00000299333 RASSF3Q86WH2 238 aa15.92■□□□□ 0.14
SCN3B-201ENST00000299333 LGR6Q9HBX8 967 aa15.92■□□□□ 0.14
SCN3B-201ENST00000299333 TNRQ92752 1358 aa15.92■□□□□ 0.14
SCN3B-201ENST00000299333 FMNL1O95466 1100 aaPredicted RBP15.92■□□□□ 0.14
SCN3B-201ENST00000299333 TRAF7Q6Q0C0 670 aa15.92■□□□□ 0.14
SCN3B-201ENST00000299333 KRT27Q7Z3Y8 459 aa15.92■□□□□ 0.14
SCN3B-201ENST00000299333 GFM2Q969S9 779 aaKnown RBP15.92■□□□□ 0.14
SCN3B-201ENST00000299333 WDR62O43379 1518 aa15.92■□□□□ 0.14
SCN3B-201ENST00000299333 ABCC4O15439 1325 aa15.91■□□□□ 0.14
SCN3B-201ENST00000299333 A1BGP04217 495 aa15.91■□□□□ 0.14
SCN3B-201ENST00000299333 ATXN8OSP0DMR3 200 aa15.91■□□□□ 0.14
SCN3B-201ENST00000299333 CAPRIN1Q14444 709 aaKnown RBP15.91■□□□□ 0.14
SCN3B-201ENST00000299333 APOA5Q6Q788 366 aa15.91■□□□□ 0.14
SCN3B-201ENST00000299333 FAF2Q96CS3 445 aa15.91■□□□□ 0.14
SCN3B-201ENST00000299333 NAF1Q96HR8 494 aaKnown RBP15.91■□□□□ 0.14
SCN3B-201ENST00000299333 UBN1Q9NPG3 1134 aa15.91■□□□□ 0.14
SCN3B-201ENST00000299333 PZPP20742 1482 aa15.91■□□□□ 0.14
SCN3B-201ENST00000299333 LAD1O00515 517 aa15.91■□□□□ 0.14
SCN3B-201ENST00000299333 KRT7P08729 469 aa15.91■□□□□ 0.14
SCN3B-201ENST00000299333 BRAFP15056 766 aa15.91■□□□□ 0.14
SCN3B-201ENST00000299333 MCF2L2Q86YR7 1114 aa15.91■□□□□ 0.14
SCN3B-201ENST00000299333 LBHD1Q9BQE6 289 aaPredicted RBP15.91■□□□□ 0.14
SCN3B-201ENST00000299333 COG4Q9H9E3 785 aa15.91■□□□□ 0.14
SCN3B-201ENST00000299333 WDR64B1ANS9 1081 aa15.91■□□□□ 0.14
SCN3B-201ENST00000299333 MORF4L2Q15014 288 aa15.91■□□□□ 0.14
SCN3B-201ENST00000299333 DPP8Q6V1X1 898 aaPredicted RBP15.91■□□□□ 0.14
SCN3B-201ENST00000299333 PAGE5Q96GU1 130 aa15.91■□□□□ 0.14
SCN3B-201ENST00000299333 TMA7Q9Y2S6 64 aaKnown RBP15.91■□□□□ 0.14
SCN3B-201ENST00000299333 ZBED1O96006 694 aa15.91■□□□□ 0.14
SCN3B-201ENST00000299333 CCNE1P24864 410 aa15.91■□□□□ 0.14
SCN3B-201ENST00000299333 ATP6V1E1P36543 226 aa15.91■□□□□ 0.14
SCN3B-201ENST00000299333 CUL4AQ13619 759 aa15.91■□□□□ 0.14
SCN3B-201ENST00000299333 POLA2Q14181 598 aa15.91■□□□□ 0.14
SCN3B-201ENST00000299333 DTX3LQ8TDB6 740 aa15.91■□□□□ 0.14
SCN3B-201ENST00000299333 GTSE1Q9NYZ3 720 aa15.91■□□□□ 0.14
SCN3B-201ENST00000299333 STMN3Q9NZ72 180 aa15.91■□□□□ 0.14
SCN3B-201ENST00000299333 SLC13A4Q9UKG4 626 aa15.91■□□□□ 0.14
SCN3B-201ENST00000299333 GOLGA8MH3BSY2 632 aa15.9■□□□□ 0.14
SCN3B-201ENST00000299333 MEFVO15553 781 aaPredicted RBP15.9■□□□□ 0.14
SCN3B-201ENST00000299333 ALAS1P13196 640 aa15.9■□□□□ 0.14
SCN3B-201ENST00000299333 MRPL28Q13084 256 aaKnown RBP15.9■□□□□ 0.14
SCN3B-201ENST00000299333 RARS2Q5T160 578 aaKnown RBP15.9■□□□□ 0.14
SCN3B-201ENST00000299333 TMEM154Q6P9G4 183 aa15.9■□□□□ 0.14
SCN3B-201ENST00000299333 RMI1Q9H9A7 625 aa15.9■□□□□ 0.14
SCN3B-201ENST00000299333 MAP3K19Q56UN5 1328 aa15.9■□□□□ 0.14
SCN3B-201ENST00000299333 IL13P35225 146 aa15.9■□□□□ 0.14
SCN3B-201ENST00000299333 GJA3Q9Y6H8 435 aa15.9■□□□□ 0.14
SCN3B-201ENST00000299333 GNPATO15228 680 aa15.9■□□□□ 0.14
SCN3B-201ENST00000299333 GNL1P36915 607 aaPredicted RBP15.9■□□□□ 0.14
SCN3B-201ENST00000299333 UBE3AQ05086 875 aa15.9■□□□□ 0.14
SCN3B-201ENST00000299333 PARD3BQ8TEW8 1205 aa15.9■□□□□ 0.14
SCN3B-201ENST00000299333 NR1H4Q96RI1 486 aaPredicted RBP15.9■□□□□ 0.14
SCN3B-201ENST00000299333 ZBTB18Q99592 522 aa15.9■□□□□ 0.14
SCN3B-201ENST00000299333 ZWILCHQ9H900 591 aa15.9■□□□□ 0.14
SCN3B-201ENST00000299333 PCDHA4Q9UN74 947 aa15.9■□□□□ 0.14
SCN3B-201ENST00000299333 PCDH11XQ9BZA7 1347 aa15.9■□□□□ 0.14
SCN3B-201ENST00000299333 PCDH11YQ9BZA8 1340 aa15.9■□□□□ 0.14
SCN3B-201ENST00000299333 CCDC144BQ3MJ40 725 aa15.9■□□□□ 0.14
SCN3B-201ENST00000299333 FBXO11Q86XK2 927 aa15.9■□□□□ 0.14
SCN3B-201ENST00000299333 UNC5CLQ8IV45 518 aa15.9■□□□□ 0.14
SCN3B-201ENST00000299333 CHURC1Q8WUH1 139 aa15.9■□□□□ 0.14
SCN3B-201ENST00000299333 AK8Q96MA6 479 aa15.9■□□□□ 0.14
SCN3B-201ENST00000299333 FAM8A1Q9UBU6 413 aa15.9■□□□□ 0.14
SCN3B-201ENST00000299333 ATP11BQ9Y2G3 1177 aa15.9■□□□□ 0.14
SCN3B-201ENST00000299333 H0YC42 278 aa15.9■□□□□ 0.14
SCN3B-201ENST00000299333 PRPSAP2O60256 369 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms