RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 KRIT1O00522 736 aa18.64■□□□□ 0.57
SPG7-201ENST00000268704 PON1P27169 355 aa18.64■□□□□ 0.57
SPG7-201ENST00000268704 HOXD13P35453 343 aa18.64■□□□□ 0.57
SPG7-201ENST00000268704 ZNF543Q08ER8 600 aa18.64■□□□□ 0.57
SPG7-201ENST00000268704 PABPC4Q13310 644 aaKnown RBP eCLIP18.64■□□□□ 0.57
SPG7-201ENST00000268704 QPCTQ16769 361 aa18.64■□□□□ 0.57
SPG7-201ENST00000268704 TUBB8Q3ZCM7 444 aa18.64■□□□□ 0.57
SPG7-201ENST00000268704 ZNF713Q8N859 430 aaPredicted RBP18.64■□□□□ 0.57
SPG7-201ENST00000268704 MYCBPQ99417 103 aaPredicted RBP18.64■□□□□ 0.57
SPG7-201ENST00000268704 TRIM31Q9BZY9 425 aa18.64■□□□□ 0.57
SPG7-201ENST00000268704 DPH5Q9H2P9 285 aa18.64■□□□□ 0.57
SPG7-201ENST00000268704 ATAD5Q96QE3 1844 aa18.64■□□□□ 0.57
SPG7-201ENST00000268704 TTI1O43156 1089 aa18.64■□□□□ 0.57
SPG7-201ENST00000268704 CASP4P49662 377 aa18.64■□□□□ 0.57
SPG7-201ENST00000268704 FAM182BQ5T319 152 aa18.64■□□□□ 0.57
SPG7-201ENST00000268704 FOXR2Q6PJQ5 311 aa18.64■□□□□ 0.57
SPG7-201ENST00000268704 TPCN2Q8NHX9 752 aa18.64■□□□□ 0.57
SPG7-201ENST00000268704 CYFIP2Q96F07 1278 aa18.64■□□□□ 0.57
SPG7-201ENST00000268704 NT5C3AQ9H0P0 336 aa18.64■□□□□ 0.57
SPG7-201ENST00000268704 CNOT8Q9UFF9 292 aaKnown RBP18.64■□□□□ 0.57
SPG7-201ENST00000268704 SPATA31A5Q5VU36 1347 aa18.64■□□□□ 0.57
SPG7-201ENST00000268704 SPATA31A7Q8IWB4 1347 aa18.64■□□□□ 0.57
SPG7-201ENST00000268704 RPS6KA4O75676 772 aa18.63■□□□□ 0.57
SPG7-201ENST00000268704 FAM107AO95990 144 aa18.63■□□□□ 0.57
SPG7-201ENST00000268704 SNHG28P0DPA3 235 aa18.63■□□□□ 0.57
SPG7-201ENST00000268704 ZBTB48P10074 688 aaPredicted RBP18.63■□□□□ 0.57
SPG7-201ENST00000268704 KCNA1Q09470 495 aa18.63■□□□□ 0.57
SPG7-201ENST00000268704 SF3B2Q13435 895 aaKnown RBP18.63■□□□□ 0.57
SPG7-201ENST00000268704 SEPT2Q15019 361 aa18.63■□□□□ 0.57
SPG7-201ENST00000268704 SFR1Q86XK3 245 aa18.63■□□□□ 0.57
SPG7-201ENST00000268704 NCAPGQ9BPX3 1015 aa18.63■□□□□ 0.57
SPG7-201ENST00000268704 ARMCX3Q9UH62 379 aaPredicted RBP18.63■□□□□ 0.57
SPG7-201ENST00000268704 RSPH10B2B2RC85 870 aa18.63■□□□□ 0.57
SPG7-201ENST00000268704 PGRMC1O00264 195 aaKnown RBP18.63■□□□□ 0.57
SPG7-201ENST00000268704 AKAP3O75969 853 aa18.63■□□□□ 0.57
SPG7-201ENST00000268704 FSBPO95073 299 aa18.63■□□□□ 0.57
SPG7-201ENST00000268704 RSPH10BP0C881 870 aa18.63■□□□□ 0.57
SPG7-201ENST00000268704 COPB2P35606 906 aa18.63■□□□□ 0.57
SPG7-201ENST00000268704 EXOC3L4Q17RC7 722 aa18.63■□□□□ 0.57
SPG7-201ENST00000268704 EMC10Q5UCC4 262 aa18.63■□□□□ 0.57
SPG7-201ENST00000268704 ADAT2Q7Z6V5 191 aaKnown RBP18.63■□□□□ 0.57
SPG7-201ENST00000268704 DDX4Q9NQI0 724 aaKnown RBP18.63■□□□□ 0.57
SPG7-201ENST00000268704 KDM3AQ9Y4C1 1321 aa18.63■□□□□ 0.57
SPG7-201ENST00000268704 SRCAPQ6ZRS2 3230 aa18.63■□□□□ 0.57
SPG7-201ENST00000268704 SLC12A3P55017 1021 aa18.63■□□□□ 0.57
SPG7-201ENST00000268704 ODF2Q5BJF6 829 aa18.63■□□□□ 0.57
SPG7-201ENST00000268704 CHADLQ6NUI6 762 aa18.63■□□□□ 0.57
SPG7-201ENST00000268704 PEX26Q7Z412 305 aa18.63■□□□□ 0.57
SPG7-201ENST00000268704 NR2E1Q9Y466 385 aa18.63■□□□□ 0.57
SPG7-201ENST00000268704 CLIC2O15247 247 aa18.62■□□□□ 0.57
SPG7-201ENST00000268704 TAL1P17542 331 aaPredicted RBP18.62■□□□□ 0.57
SPG7-201ENST00000268704 SHROOM1Q2M3G4 852 aaPredicted RBP18.62■□□□□ 0.57
SPG7-201ENST00000268704 HYIQ5T013 277 aa18.62■□□□□ 0.57
SPG7-201ENST00000268704 ACTRT1Q8TDG2 376 aa18.62■□□□□ 0.57
SPG7-201ENST00000268704 C8orf37Q96NL8 207 aa18.62■□□□□ 0.57
SPG7-201ENST00000268704 DHX36Q9H2U1 1008 aaKnown RBP18.62■□□□□ 0.57
SPG7-201ENST00000268704 SLC12A6Q9UHW9 1150 aa18.62■□□□□ 0.57
SPG7-201ENST00000268704 NRAPQ86VF7 1730 aa18.62■□□□□ 0.57
SPG7-201ENST00000268704 MPHOSPH10O00566 681 aaKnown RBP18.62■□□□□ 0.57
SPG7-201ENST00000268704 SF3A3Q12874 501 aaKnown RBP eCLIP18.62■□□□□ 0.571e-6■■□□□ 14.5
SPG7-201ENST00000268704 DAAM2Q86T65 1068 aa18.62■□□□□ 0.57
SPG7-201ENST00000268704 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.62■□□□□ 0.572e-8■■□□□ 12.8
SPG7-201ENST00000268704 REEP2Q9BRK0 252 aa18.62■□□□□ 0.57
SPG7-201ENST00000268704 TRIM51Q9BSJ1 452 aa18.62■□□□□ 0.57
SPG7-201ENST00000268704 OSGEPQ9NPF4 335 aa18.62■□□□□ 0.57
SPG7-201ENST00000268704 NOVA2Q9UNW9 492 aaKnown RBP18.62■□□□□ 0.57
SPG7-201ENST00000268704 DAGLAQ9Y4D2 1042 aa18.62■□□□□ 0.57
SPG7-201ENST00000268704 ATXN2Q99700 1313 aaKnown RBP18.62■□□□□ 0.57
SPG7-201ENST00000268704 AFPP02771 609 aaKnown RBP18.61■□□□□ 0.57
SPG7-201ENST00000268704 SNAP25P60880 206 aa18.61■□□□□ 0.57
SPG7-201ENST00000268704 CATSPER3Q86XQ3 398 aa18.61■□□□□ 0.57
SPG7-201ENST00000268704 CCDC13Q8IYE1 715 aa18.61■□□□□ 0.57
SPG7-201ENST00000268704 CD248Q9HCU0 757 aa18.61■□□□□ 0.57
SPG7-201ENST00000268704 MRPL12P52815 198 aaKnown RBP18.61■□□□□ 0.57
SPG7-201ENST00000268704 CUL1Q13616 776 aa18.61■□□□□ 0.57
SPG7-201ENST00000268704 MEX3CQ5U5Q3 659 aaKnown RBP18.61■□□□□ 0.57
SPG7-201ENST00000268704 U2AF1L4Q8WU68 220 aaKnown RBP18.61■□□□□ 0.57
SPG7-201ENST00000268704 PBKQ96KB5 322 aa18.61■□□□□ 0.57
SPG7-201ENST00000268704 CABS1Q96KC9 395 aa18.61■□□□□ 0.57
SPG7-201ENST00000268704 P2RX7Q99572 595 aaKnown RBP18.61■□□□□ 0.57
SPG7-201ENST00000268704 TTLL1O95922 423 aa18.6■□□□□ 0.57
SPG7-201ENST00000268704 XRCC5P13010 732 aaKnown RBP18.6■□□□□ 0.57
SPG7-201ENST00000268704 CYP4A11Q02928 519 aa18.6■□□□□ 0.57
SPG7-201ENST00000268704 MICALCLQ6ZW33 695 aa18.6■□□□□ 0.57
SPG7-201ENST00000268704 ZC3H3Q8IXZ2 948 aaKnown RBP18.6■□□□□ 0.57
SPG7-201ENST00000268704 CEP89Q96ST8 783 aa18.6■□□□□ 0.57
SPG7-201ENST00000268704 DDX20Q9UHI6 824 aaKnown RBP18.6■□□□□ 0.57
SPG7-201ENST00000268704 DDX3XO00571 662 aaKnown RBP eCLIP18.6■□□□□ 0.571e-13■■■□□ 19
SPG7-201ENST00000268704 ZBTB5O15062 677 aa18.6■□□□□ 0.57
SPG7-201ENST00000268704 GFPT2O94808 682 aa18.6■□□□□ 0.57
SPG7-201ENST00000268704 PLCG2P16885 1265 aa18.6■□□□□ 0.57
SPG7-201ENST00000268704 GIT2Q14161 759 aa18.6■□□□□ 0.57
SPG7-201ENST00000268704 EDRF1Q3B7T1 1238 aa18.6■□□□□ 0.57
SPG7-201ENST00000268704 SIX2Q9NPC8 291 aa18.6■□□□□ 0.57
SPG7-201ENST00000268704 GCNT4Q9P109 453 aa18.6■□□□□ 0.57
SPG7-201ENST00000268704 SFI1A8K8P3 1242 aa18.6■□□□□ 0.57
SPG7-201ENST00000268704 ATP2C2O75185 946 aa18.6■□□□□ 0.57
SPG7-201ENST00000268704 GABPAQ06546 454 aa18.6■□□□□ 0.57
SPG7-201ENST00000268704 PRR16Q569H4 304 aa18.6■□□□□ 0.57
SPG7-201ENST00000268704 SLC30A10Q6XR72 485 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms