RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 ZBED1O96006 694 aa18.05■□□□□ 0.48
TSPAN3-201ENST00000267970 NFRKBQ6P4R8 1299 aa18.05■□□□□ 0.48
TSPAN3-201ENST00000267970 FOXP1Q9H334 677 aaPredicted RBP18.05■□□□□ 0.48
TSPAN3-201ENST00000267970 RWDD2AQ9UIY3 292 aa18.05■□□□□ 0.48
TSPAN3-201ENST00000267970 GLE1Q53GS7 698 aaKnown RBP18.05■□□□□ 0.48
TSPAN3-201ENST00000267970 EIF2AQ9BY44 585 aaKnown RBP18.05■□□□□ 0.48
TSPAN3-201ENST00000267970 VPS11Q9H270 941 aa18.05■□□□□ 0.48
TSPAN3-201ENST00000267970 RASA4BC9J798 803 aa18.05■□□□□ 0.48
TSPAN3-201ENST00000267970 RASA4O43374 803 aa18.05■□□□□ 0.48
TSPAN3-201ENST00000267970 MAN1A2O60476 641 aa18.05■□□□□ 0.48
TSPAN3-201ENST00000267970 PSMA2P25787 234 aa18.05■□□□□ 0.48
TSPAN3-201ENST00000267970 ECT2Q9H8V3 914 aa18.05■□□□□ 0.48
TSPAN3-201ENST00000267970 ZFP69BQ9UJL9 534 aa18.05■□□□□ 0.48
TSPAN3-201ENST00000267970 FAM160B1Q5W0V3 765 aa18.05■□□□□ 0.48
TSPAN3-201ENST00000267970 DPP9Q86TI2 863 aa18.05■□□□□ 0.48
TSPAN3-201ENST00000267970 TBC1D22AQ8WUA7 517 aa18.05■□□□□ 0.48
TSPAN3-201ENST00000267970 NR1H4Q96RI1 486 aaPredicted RBP18.05■□□□□ 0.48
TSPAN3-201ENST00000267970 PRR29P0C7W0 189 aa18.04■□□□□ 0.48
TSPAN3-201ENST00000267970 SF3B3Q15393 1217 aaKnown RBP18.04■□□□□ 0.48
TSPAN3-201ENST00000267970 ARHGAP27Q6ZUM4 889 aa18.04■□□□□ 0.48
TSPAN3-201ENST00000267970 MCF2L2Q86YR7 1114 aa18.04■□□□□ 0.48
TSPAN3-201ENST00000267970 ZSWIM5Q9P217 1185 aa18.04■□□□□ 0.48
TSPAN3-201ENST00000267970 SYCE1LA8MT33 242 aa18.04■□□□□ 0.48
TSPAN3-201ENST00000267970 PIK3R2O00459 728 aa18.04■□□□□ 0.48
TSPAN3-201ENST00000267970 AOC3Q16853 763 aa18.04■□□□□ 0.48
TSPAN3-201ENST00000267970 NGRNQ9NPE2 291 aaKnown RBP18.04■□□□□ 0.48
TSPAN3-201ENST00000267970 DNAJC5BQ9UF47 199 aa18.04■□□□□ 0.48
TSPAN3-201ENST00000267970 ZNF746Q6NUN9 644 aaPredicted RBP18.04■□□□□ 0.48
TSPAN3-201ENST00000267970 PBKQ96KB5 322 aa18.04■□□□□ 0.48
TSPAN3-201ENST00000267970 UHRF1BP1Q6BDS2 1440 aa18.04■□□□□ 0.48
TSPAN3-201ENST00000267970 CRLF3Q8IUI8 442 aa18.04■□□□□ 0.48
TSPAN3-201ENST00000267970 LRRC36Q1X8D7 754 aa18.04■□□□□ 0.48
TSPAN3-201ENST00000267970 KDELC2Q7Z4H8 507 aa18.04■□□□□ 0.48
TSPAN3-201ENST00000267970 FBXL5Q9UKA1 691 aa18.04■□□□□ 0.48
TSPAN3-201ENST00000267970 ERBB4Q15303 1308 aa18.04■□□□□ 0.48
TSPAN3-201ENST00000267970 CREB3O43889 395 aa18.04■□□□□ 0.48
TSPAN3-201ENST00000267970 FLOT2Q14254 428 aa18.04■□□□□ 0.48
TSPAN3-201ENST00000267970 OSBPL1AQ9BXW6 950 aa18.04■□□□□ 0.48
TSPAN3-201ENST00000267970 NDST4Q9H3R1 872 aa18.04■□□□□ 0.48
TSPAN3-201ENST00000267970 LMTK3Q96Q04 1460 aa18.03■□□□□ 0.48
TSPAN3-201ENST00000267970 POU5F1BQ06416 359 aa18.03■□□□□ 0.48
TSPAN3-201ENST00000267970 ADAM21Q9UKJ8 722 aa18.03■□□□□ 0.48
TSPAN3-201ENST00000267970 A0A1W2PQ27 194 aa18.03■□□□□ 0.48
TSPAN3-201ENST00000267970 A0A1W2PQ64 194 aa18.03■□□□□ 0.48
TSPAN3-201ENST00000267970 A0A1W2PQD8 194 aa18.03■□□□□ 0.48
TSPAN3-201ENST00000267970 MCTP2Q6DN12 878 aa18.03■□□□□ 0.48
TSPAN3-201ENST00000267970 DACH2Q96NX9 599 aa18.03■□□□□ 0.48
TSPAN3-201ENST00000267970 GOLPH3LQ9H4A5 285 aa18.03■□□□□ 0.48
TSPAN3-201ENST00000267970 LRRC4Q9HBW1 653 aa18.03■□□□□ 0.48
TSPAN3-201ENST00000267970 ADA2Q9NZK5 511 aa18.03■□□□□ 0.48
TSPAN3-201ENST00000267970 EIF2AK4Q9P2K8 1649 aaKnown RBP18.03■□□□□ 0.48
TSPAN3-201ENST00000267970 LOC102724159A0A0B4J2E5 919 aa18.03■□□□□ 0.48
TSPAN3-201ENST00000267970 ALDH1B1P30837 517 aa18.03■□□□□ 0.48
TSPAN3-201ENST00000267970 PEX3P56589 373 aa18.03■□□□□ 0.48
TSPAN3-201ENST00000267970 PWP2Q15269 919 aaKnown RBP18.03■□□□□ 0.48
TSPAN3-201ENST00000267970 NBPF10Q6P3W6 841 aaKnown RBP18.03■□□□□ 0.48
TSPAN3-201ENST00000267970 EPM2AIP1Q7L775 607 aaPredicted RBP18.03■□□□□ 0.48
TSPAN3-201ENST00000267970 ABI1Q8IZP0 508 aa18.03■□□□□ 0.48
TSPAN3-201ENST00000267970 OSBP2Q969R2 916 aa18.03■□□□□ 0.48
TSPAN3-201ENST00000267970 FAM161BQ96MY7 647 aa18.03■□□□□ 0.48
TSPAN3-201ENST00000267970 DIAPH2O60879 1101 aa18.03■□□□□ 0.48
TSPAN3-201ENST00000267970 EXOC4Q96A65 974 aa18.03■□□□□ 0.48
TSPAN3-201ENST00000267970 RNF25Q96BH1 459 aaPredicted RBP18.03■□□□□ 0.48
TSPAN3-201ENST00000267970 POLR3EQ9NVU0 708 aa18.03■□□□□ 0.48
TSPAN3-201ENST00000267970 ZNF804BA4D1E1 1349 aa18.03■□□□□ 0.48
TSPAN3-201ENST00000267970 ZMYM1Q5SVZ6 1142 aa18.03■□□□□ 0.48
TSPAN3-201ENST00000267970 RFWD2Q8NHY2 731 aa18.03■□□□□ 0.48
TSPAN3-201ENST00000267970 OTULINQ96BN8 352 aa18.03■□□□□ 0.48
TSPAN3-201ENST00000267970 COPEO14579 308 aa18.02■□□□□ 0.48
TSPAN3-201ENST00000267970 TRIM42Q8IWZ5 723 aa18.02■□□□□ 0.48
TSPAN3-201ENST00000267970 AMNQ9BXJ7 453 aa18.02■□□□□ 0.48
TSPAN3-201ENST00000267970 PRDM5Q9NQX1 630 aaPredicted RBP18.02■□□□□ 0.48
TSPAN3-201ENST00000267970 ANAPC7Q9UJX3 599 aa18.02■□□□□ 0.48
TSPAN3-201ENST00000267970 ABCC12Q96J65 1359 aa18.02■□□□□ 0.48
TSPAN3-201ENST00000267970 HNRNPCP07910 306 aaKnown RBP eCLIP18.02■□□□□ 0.48
TSPAN3-201ENST00000267970 KRT33BQ14525 404 aa18.02■□□□□ 0.48
TSPAN3-201ENST00000267970 KIAA2013Q8IYS2 634 aa18.02■□□□□ 0.48
TSPAN3-201ENST00000267970 SLC7A3Q8WY07 619 aa18.02■□□□□ 0.48
TSPAN3-201ENST00000267970 CNOT10Q9H9A5 744 aaKnown RBP18.02■□□□□ 0.48
TSPAN3-201ENST00000267970 NOP53Q9NZM5 478 aaKnown RBP18.02■□□□□ 0.48
TSPAN3-201ENST00000267970 AFF4Q9UHB7 1163 aaKnown RBP18.02■□□□□ 0.48
TSPAN3-201ENST00000267970 BPIFB4P59827 614 aa18.02■□□□□ 0.48
TSPAN3-201ENST00000267970 E2F8A0AVK6 867 aa18.02■□□□□ 0.47
TSPAN3-201ENST00000267970 FKBP3Q00688 224 aaKnown RBP18.02■□□□□ 0.47
TSPAN3-201ENST00000267970 TERF2Q15554 542 aa18.02■□□□□ 0.47
TSPAN3-201ENST00000267970 CENPUQ71F23 418 aa18.02■□□□□ 0.47
TSPAN3-201ENST00000267970 SIX6OS1Q8N1H7 587 aa18.02■□□□□ 0.47
TSPAN3-201ENST00000267970 CCNYL1Q8N7R7 359 aa18.02■□□□□ 0.47
TSPAN3-201ENST00000267970 ING2Q9H160 280 aa18.02■□□□□ 0.47
TSPAN3-201ENST00000267970 ACTR5Q9H9F9 607 aaPredicted RBP18.02■□□□□ 0.47
TSPAN3-201ENST00000267970 IKBKBO14920 756 aa18.02■□□□□ 0.47
TSPAN3-201ENST00000267970 ESRRBO95718 433 aa18.02■□□□□ 0.47
TSPAN3-201ENST00000267970 PCSK1NQ9UHG2 260 aa18.02■□□□□ 0.47
TSPAN3-201ENST00000267970 EIF2AK2P19525 551 aaKnown RBP18.01■□□□□ 0.47
TSPAN3-201ENST00000267970 MIS18BP1Q6P0N0 1132 aa18.01■□□□□ 0.47
TSPAN3-201ENST00000267970 DDX28Q9NUL7 540 aaKnown RBP18.01■□□□□ 0.47
TSPAN3-201ENST00000267970 POLIQ9UNA4 740 aa18.01■□□□□ 0.47
TSPAN3-201ENST00000267970 DUOX2Q9NRD8 1548 aa18.01■□□□□ 0.47
TSPAN3-201ENST00000267970 A2MP01023 1474 aa18.01■□□□□ 0.47
TSPAN3-201ENST00000267970 CCDC159P0C7I6 412 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms