RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W CIN4P39110 191 aa2.99□□□□□ -1.93
MSH2YOL090W PRP39P39682 629 aaKnown RBP2.99□□□□□ -1.93
MSH2YOL090W YER130CP39959 443 aa2.99□□□□□ -1.93
MSH2YOL090W FMC1P40491 155 aa2.99□□□□□ -1.93
MSH2YOL090W YIR042CP40586 236 aa2.99□□□□□ -1.93
MSH2YOL090W YNL260CP53846 198 aa2.99□□□□□ -1.93
MSH2YOL090W BET4Q00618 327 aa2.99□□□□□ -1.93
MSH2YOL090W ECM30Q06673 1274 aa2.99□□□□□ -1.93
MSH2YOL090W YDL057WQ07379 328 aa2.99□□□□□ -1.93
MSH2YOL090W IRC13Q08630 104 aa2.99□□□□□ -1.93
MSH2YOL090W TIP41Q12199 356 aa2.99□□□□□ -1.93
MSH2YOL090W YOR029WQ12243 111 aa2.99□□□□□ -1.93
MSH2YOL090W RNH203Q12338 110 aa2.99□□□□□ -1.93
MSH2YOL090W RAD9P14737 1309 aa2.99□□□□□ -1.93
MSH2YOL090W KSS1P14681 368 aa2.98□□□□□ -1.93
MSH2YOL090W SAR1P20606 190 aaKnown RBP2.98□□□□□ -1.93
MSH2YOL090W MSB1P21339 1137 aaKnown RBP2.98□□□□□ -1.93
MSH2YOL090W LHS1P36016 881 aa2.98□□□□□ -1.93
MSH2YOL090W TCM62P38228 572 aaKnown RBP2.98□□□□□ -1.93
MSH2YOL090W UBA4P38820 440 aa2.98□□□□□ -1.93
MSH2YOL090W YDL186WP48568 277 aa2.98□□□□□ -1.93
MSH2YOL090W MUP1P50276 574 aa2.98□□□□□ -1.93
MSH2YOL090W ERG26P53199 349 aaKnown RBP2.98□□□□□ -1.93
MSH2YOL090W RTC4P53850 401 aa2.98□□□□□ -1.93
MSH2YOL090W SLT2Q00772 484 aa2.98□□□□□ -1.93
MSH2YOL090W RSM23Q01163 450 aa2.98□□□□□ -1.93
MSH2YOL090W FUS2Q05670 677 aa2.98□□□□□ -1.93
MSH2YOL090W RAX1Q08760 435 aa2.98□□□□□ -1.93
MSH2YOL090W YKL033W-AQ86ZR7 236 aa2.98□□□□□ -1.93
MSH2YOL090W RPL24AP04449 155 aaKnown RBP2.98□□□□□ -1.93
MSH2YOL090W RHO2P06781 192 aa2.98□□□□□ -1.93
MSH2YOL090W GDH1P07262 454 aaKnown RBP2.98□□□□□ -1.93
MSH2YOL090W CHS1P08004 1131 aa2.98□□□□□ -1.93
MSH2YOL090W FRS2P15625 503 aaKnown RBP2.98□□□□□ -1.93
MSH2YOL090W OSM1P21375 501 aaKnown RBP2.98□□□□□ -1.93
MSH2YOL090W DBR1P24309 405 aaKnown RBP2.98□□□□□ -1.93
MSH2YOL090W DEG1P31115 442 aaKnown RBP2.98□□□□□ -1.93
MSH2YOL090W RPC25P35718 212 aa2.98□□□□□ -1.93
MSH2YOL090W COS9P36034 407 aa2.98□□□□□ -1.93
MSH2YOL090W VBA2P38358 474 aaKnown RBP2.98□□□□□ -1.93
MSH2YOL090W SAP1P39955 897 aaKnown RBP2.98□□□□□ -1.93
MSH2YOL090W SYG1P40528 902 aa2.98□□□□□ -1.93
MSH2YOL090W YPS6P40583 537 aa2.98□□□□□ -1.93
MSH2YOL090W PHO86P46956 311 aa2.98□□□□□ -1.93
MSH2YOL090W NMA2P53204 395 aa2.98□□□□□ -1.93
MSH2YOL090W ATG4P53867 494 aa2.98□□□□□ -1.93
MSH2YOL090W MRPL22P53881 309 aa2.98□□□□□ -1.93
MSH2YOL090W YMR310CQ04867 317 aaPredicted RBP2.98□□□□□ -1.93
MSH2YOL090W HRD3Q05787 833 aa2.98□□□□□ -1.93
MSH2YOL090W YLR283WQ05867 314 aa2.98□□□□□ -1.93
MSH2YOL090W NSE1Q07913 336 aa2.98□□□□□ -1.93
MSH2YOL090W TLG2Q08144 397 aa2.98□□□□□ -1.93
MSH2YOL090W NOP12Q08208 459 aaKnown RBP2.98□□□□□ -1.93
MSH2YOL090W LAG2Q92325 660 aa2.98□□□□□ -1.93
MSH2YOL090W SPE2P21182 396 aa2.98□□□□□ -1.93
MSH2YOL090W GPI12P23797 304 aa2.98□□□□□ -1.93
MSH2YOL090W KDX1P36005 433 aa2.98□□□□□ -1.93
MSH2YOL090W RRN10P38204 145 aa2.98□□□□□ -1.93
MSH2YOL090W EFM2P38347 419 aa2.98□□□□□ -1.93
MSH2YOL090W MMS21P38632 267 aa2.98□□□□□ -1.93
MSH2YOL090W TFG2P41896 400 aaPredicted RBP2.98□□□□□ -1.93
MSH2YOL090W AMA1P50082 593 aa2.98□□□□□ -1.93
MSH2YOL090W NOP13P53883 403 aaKnown RBP RIP-Chip data2.98□□□□□ -1.93not detected
MSH2YOL090W YNL146WP53906 100 aa2.98□□□□□ -1.93
MSH2YOL090W TAF12Q03761 539 aa2.98□□□□□ -1.93
MSH2YOL090W ARR2Q06597 130 aa2.98□□□□□ -1.93
MSH2YOL090W DNL4Q08387 944 aaPredicted RBP2.98□□□□□ -1.93
MSH2YOL090W GET4Q12125 312 aa2.98□□□□□ -1.93
MSH2YOL090W PRP46Q12417 451 aaPredicted RBP2.98□□□□□ -1.93
MSH2YOL090W YOS9Q99220 542 aa2.98□□□□□ -1.93
MSH2YOL090W RAV1P47104 1357 aa2.97□□□□□ -1.93
MSH2YOL090W CIN8P27895 1000 aa2.97□□□□□ -1.93
MSH2YOL090W YKL162CP36052 402 aa2.97□□□□□ -1.93
MSH2YOL090W YPK3P38070 525 aa2.97□□□□□ -1.93
MSH2YOL090W BNA4P38169 460 aa2.97□□□□□ -1.93
MSH2YOL090W KAP104P38217 918 aaKnown RBP2.97□□□□□ -1.93
MSH2YOL090W SAS2P40963 338 aa2.97□□□□□ -1.93
MSH2YOL090W PYK2P52489 506 aaKnown RBP2.97□□□□□ -1.93
MSH2YOL090W YPR003CP53394 754 aa2.97□□□□□ -1.93
MSH2YOL090W YDL086WQ07505 273 aa2.97□□□□□ -1.93
MSH2YOL090W LOT6Q07923 191 aa2.97□□□□□ -1.93
MSH2YOL090W PEX27Q08580 376 aa2.97□□□□□ -1.93
MSH2YOL090W USV1Q12132 391 aa2.97□□□□□ -1.93
MSH2YOL090W RKI1Q12189 258 aa2.97□□□□□ -1.93
MSH2YOL090W ADH2P00331 348 aaKnown RBP2.97□□□□□ -1.93
MSH2YOL090W RAD52P06778 471 aaKnown RBP2.97□□□□□ -1.93
MSH2YOL090W RAD3P06839 778 aa2.97□□□□□ -1.93
MSH2YOL090W YMR085WP0CF18 432 aa2.97□□□□□ -1.93
MSH2YOL090W ACH1P32316 526 aa2.97□□□□□ -1.93
MSH2YOL090W MSS51P32335 436 aa2.97□□□□□ -1.93
MSH2YOL090W ZUO1P32527 433 aaKnown RBP2.97□□□□□ -1.93
MSH2YOL090W PTR2P32901 601 aa2.97□□□□□ -1.93
MSH2YOL090W LST4P34239 828 aa2.97□□□□□ -1.93
MSH2YOL090W AIM29P36154 155 aa2.97□□□□□ -1.93
MSH2YOL090W MRPL10P36520 322 aa2.97□□□□□ -1.93
MSH2YOL090W OLA1P38219 394 aaKnown RBP2.97□□□□□ -1.93
MSH2YOL090W RTC2P38279 296 aa2.97□□□□□ -1.93
MSH2YOL090W INM1P38710 295 aa2.97□□□□□ -1.93
MSH2YOL090W SMF2P38778 549 aa2.97□□□□□ -1.93
MSH2YOL090W YEL020CP39994 560 aa2.97□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms