RNA–Protein interactions for RNA: YKL113C

RAD27, Transcript of 5' to 3' exonuclease, 5' flap endonuclease, yeast

Gene RAD27, Length 1,149 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAD27	YKL113C	VPS13	Q07878	3144 aa		4.1	□□□□□ -1.75
RAD27	YKL113C	YPR096C	O13587	100 aa		4.1	□□□□□ -1.75
RAD27	YKL113C	RAS2	P01120	322 aa	Known RBP	4.1	□□□□□ -1.75
RAD27	YKL113C	TPK3	P05986	398 aa		4.1	□□□□□ -1.75
RAD27	YKL113C	RAD7	P06779	565 aa		4.1	□□□□□ -1.75
RAD27	YKL113C	CPA1	P07258	411 aa	Known RBP	4.1	□□□□□ -1.75
RAD27	YKL113C	LAT1	P12695	482 aa	Known RBP	4.1	□□□□□ -1.75
RAD27	YKL113C	GAL3	P13045	520 aa		4.1	□□□□□ -1.75
RAD27	YKL113C	FUR1	P18562	216 aa	Known RBP	4.1	□□□□□ -1.75
RAD27	YKL113C	DAP2	P18962	818 aa		4.1	□□□□□ -1.75
RAD27	YKL113C	PRI2	P20457	528 aa		4.1	□□□□□ -1.75
RAD27	YKL113C	EPT1	P22140	391 aa		4.1	□□□□□ -1.75
RAD27	YKL113C	URE2	P23202	354 aa	Known RBP	4.1	□□□□□ -1.75
RAD27	YKL113C	SGV1	P23293	657 aa	Known RBP	4.1	□□□□□ -1.75
RAD27	YKL113C	CLB2	P24869	491 aa		4.1	□□□□□ -1.75
RAD27	YKL113C	SLM5	P25345	492 aa	Known RBP	4.1	□□□□□ -1.75
RAD27	YKL113C	MCM10	P32354	571 aa		4.1	□□□□□ -1.75
RAD27	YKL113C	ORC2	P32833	620 aa		4.1	□□□□□ -1.75
RAD27	YKL113C	ATO2	P32907	282 aa		4.1	□□□□□ -1.75
RAD27	YKL113C	YUH1	P35127	236 aa		4.1	□□□□□ -1.75
RAD27	YKL113C	SPC34	P36131	295 aa		4.1	□□□□□ -1.75
RAD27	YKL113C	SOL2	P37262	315 aa		4.1	□□□□□ -1.75
RAD27	YKL113C	MNN2	P38069	597 aa		4.1	□□□□□ -1.75
RAD27	YKL113C	CHK1	P38147	527 aa		4.1	□□□□□ -1.75
RAD27	YKL113C	SEA4	P38164	1038 aa		4.1	□□□□□ -1.75
RAD27	YKL113C	MNN9	P39107	395 aa	Known RBP	4.1	□□□□□ -1.75
RAD27	YKL113C	TIM17	P39515	158 aa		4.1	□□□□□ -1.75
RAD27	YKL113C	RPS26A	P39938	119 aa	Known RBP	4.1	□□□□□ -1.75
RAD27	YKL113C	RPS26B	P39939	119 aa	Known RBP	4.1	□□□□□ -1.75
RAD27	YKL113C	SPF1	P39986	1215 aa	Known RBP	4.1	□□□□□ -1.75
RAD27	YKL113C	AVT6	P40074	448 aa		4.1	□□□□□ -1.75
RAD27	YKL113C	IRC5	P43610	853 aa		4.1	□□□□□ -1.75
RAD27	YKL113C	YJR149W	P47177	404 aa		4.1	□□□□□ -1.75
RAD27	YKL113C	YDL183C	P48569	320 aa		4.1	□□□□□ -1.75
RAD27	YKL113C	FLC3	P53121	802 aa		4.1	□□□□□ -1.75
RAD27	YKL113C	YNL260C	P53846	198 aa		4.1	□□□□□ -1.75
RAD27	YKL113C	YNL034W	P53963	612 aa		4.1	□□□□□ -1.75
RAD27	YKL113C	TGL2	P54857	326 aa		4.1	□□□□□ -1.75
RAD27	YKL113C	EMI1	Q04406	187 aa		4.1	□□□□□ -1.75
RAD27	YKL113C	DPB4	Q04603	196 aa	Known RBP	4.1	□□□□□ -1.75
RAD27	YKL113C	SPR28	Q04921	423 aa		4.1	□□□□□ -1.75
RAD27	YKL113C	MCM21	Q06675	368 aa		4.1	□□□□□ -1.75
RAD27	YKL113C	GRS2	Q06817	618 aa		4.1	□□□□□ -1.75
RAD27	YKL113C	RSB1	Q08417	382 aa		4.1	□□□□□ -1.75
RAD27	YKL113C	PIN2	Q12057	282 aa		4.1	□□□□□ -1.75
RAD27	YKL113C	MLH3	Q12083	715 aa		4.1	□□□□□ -1.75
RAD27	YKL113C	ATG29	Q12092	213 aa		4.1	□□□□□ -1.75
RAD27	YKL113C	NMD4	Q12129	218 aa		4.1	□□□□□ -1.75
RAD27	YKL113C	PST1	Q12355	444 aa		4.1	□□□□□ -1.75
RAD27	YKL113C	WTM1	Q12363	437 aa	Known RBP	4.1	□□□□□ -1.75
RAD27	YKL113C	NSI1	Q12457	570 aa		4.1	□□□□□ -1.75
RAD27	YKL113C	YCL012C	Q8J0M4	134 aa		4.1	□□□□□ -1.75
RAD27	YKL113C	YOR019W	Q99248	730 aa		4.1	□□□□□ -1.75
RAD27	YKL113C	GPH1	P06738	902 aa	Known RBP	4.09	□□□□□ -1.75
RAD27	YKL113C	HIP1	P06775	603 aa		4.09	□□□□□ -1.75
RAD27	YKL113C	PDE2	P06776	526 aa		4.09	□□□□□ -1.75
RAD27	YKL113C	FUS3	P16892	353 aa	Known RBP	4.09	□□□□□ -1.75
RAD27	YKL113C	PPZ1	P26570	692 aa		4.09	□□□□□ -1.75
RAD27	YKL113C	URK1	P27515	501 aa		4.09	□□□□□ -1.75
RAD27	YKL113C	UBC8	P28263	218 aa		4.09	□□□□□ -1.75
RAD27	YKL113C	VMA6	P32366	345 aa	Known RBP	4.09	□□□□□ -1.75
RAD27	YKL113C	PRP21	P32524	280 aa	Predicted RBP	4.09	□□□□□ -1.75
RAD27	YKL113C	GMH1	P36125	273 aa		4.09	□□□□□ -1.75
RAD27	YKL113C	ECM8	P38246	354 aa		4.09	□□□□□ -1.75
RAD27	YKL113C	IML3	P38265	245 aa		4.09	□□□□□ -1.75
RAD27	YKL113C	AMN1	P38285	549 aa	Predicted RBP	4.09	□□□□□ -1.75
RAD27	YKL113C	RCK1	P38622	512 aa		4.09	□□□□□ -1.75
RAD27	YKL113C	GIC1	P38785	314 aa		4.09	□□□□□ -1.75
RAD27	YKL113C	MTG2	P38860	518 aa		4.09	□□□□□ -1.75
RAD27	YKL113C	MEP2	P41948	499 aa		4.09	□□□□□ -1.75
RAD27	YKL113C	FAR7	P43592	221 aa		4.09	□□□□□ -1.75
RAD27	YKL113C	DUG1	P43616	481 aa	Known RBP	4.09	□□□□□ -1.75
RAD27	YKL113C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
RAD27	YKL113C	YJR030C	P47101	745 aa		4.09	□□□□□ -1.75
RAD27	YKL113C	PYK2	P52489	506 aa	Known RBP	4.09	□□□□□ -1.75
RAD27	YKL113C	VEL1	P53058	206 aa		4.09	□□□□□ -1.75
RAD27	YKL113C	SLD3	P53135	668 aa		4.09	□□□□□ -1.75
RAD27	YKL113C	VAC7	P53950	1165 aa		4.09	□□□□□ -1.75
RAD27	YKL113C	LEE1	Q02799	301 aa	Known RBP	4.09	□□□□□ -1.75
RAD27	YKL113C	YMR010W	Q03687	405 aa		4.09	□□□□□ -1.75
RAD27	YKL113C	YMR034C	Q05131	434 aa	Predicted RBP	4.09	□□□□□ -1.75
RAD27	YKL113C	VPS74	Q06385	345 aa		4.09	□□□□□ -1.75
RAD27	YKL113C	YDL114W	Q07530	308 aa		4.09	□□□□□ -1.75
RAD27	YKL113C	COS7	Q07788	383 aa		4.09	□□□□□ -1.75
RAD27	YKL113C	PUS7	Q08647	676 aa	Known RBP	4.09	□□□□□ -1.75
RAD27	YKL113C	FLC1	Q08967	793 aa		4.09	□□□□□ -1.75
RAD27	YKL113C	RPN5	Q12250	445 aa	Known RBP	4.09	□□□□□ -1.75
RAD27	YKL113C	IES3	Q12345	250 aa		4.09	□□□□□ -1.75
RAD27	YKL113C	MED11	Q99278	115 aa		4.09	□□□□□ -1.75
RAD27	YKL113C	VCX1	Q99385	411 aa		4.09	□□□□□ -1.75
RAD27	YKL113C	SLH1	P53327	1967 aa	Known RBP	4.09	□□□□□ -1.76
RAD27	YKL113C	FPR1	P20081	114 aa	Known RBP	4.08	□□□□□ -1.76
RAD27	YKL113C	PRP2	P20095	876 aa	Predicted RBP	4.08	□□□□□ -1.76
RAD27	YKL113C	RPI1	P23250	407 aa	Known RBP	4.08	□□□□□ -1.76
RAD27	YKL113C	YSR3	P23501	404 aa		4.08	□□□□□ -1.76
RAD27	YKL113C	GRR1	P24814	1151 aa		4.08	□□□□□ -1.76
RAD27	YKL113C	RFA2	P26754	273 aa	Known RBP	4.08	□□□□□ -1.76
RAD27	YKL113C	CDC5	P32562	705 aa		4.08	□□□□□ -1.76
RAD27	YKL113C	RPT5	P33297	434 aa	Known RBP	4.08	□□□□□ -1.76
RAD27	YKL113C	GDH2	P33327	1092 aa	Known RBP	4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms