RNA–Protein interactions for RNA: YGR009C

SEC9, Transcript of t-SNARE protein required for secretory vesicle-plasma membrane fusion, yeast

Gene SEC9, Length 1,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC9	YGR009C	ACK1	Q07622	623 aa	Predicted RBP	4.67	□□□□□ -1.66
SEC9	YGR009C	PAM18	Q07914	168 aa		4.67	□□□□□ -1.66
SEC9	YGR009C	AAD15	Q08361	143 aa		4.67	□□□□□ -1.66
SEC9	YGR009C	YOR365C	Q08844	703 aa		4.67	□□□□□ -1.66
SEC9	YGR009C	MRX4	Q12467	430 aa		4.67	□□□□□ -1.66
SEC9	YGR009C	MOD5	P07884	428 aa		4.67	□□□□□ -1.66
SEC9	YGR009C	MRP1	P10662	321 aa	Known RBP	4.67	□□□□□ -1.66
SEC9	YGR009C	MRP2	P10663	115 aa	Predicted RBP	4.67	□□□□□ -1.66
SEC9	YGR009C	PET54	P10834	293 aa		4.67	□□□□□ -1.66
SEC9	YGR009C	MAS2	P11914	482 aa		4.67	□□□□□ -1.66
SEC9	YGR009C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.67	□□□□□ -1.66	not detected
SEC9	YGR009C	IME1	P21190	360 aa		4.67	□□□□□ -1.66
SEC9	YGR009C	SCL1	P21243	252 aa	Known RBP	4.67	□□□□□ -1.66
SEC9	YGR009C	RFA1	P22336	621 aa	Known RBP	4.67	□□□□□ -1.66
SEC9	YGR009C	CLB2	P24869	491 aa		4.67	□□□□□ -1.66
SEC9	YGR009C	HRR25	P29295	494 aa	Known RBP	4.67	□□□□□ -1.66
SEC9	YGR009C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.67	□□□□□ -1.66	not detected
SEC9	YGR009C	ECM25	P32525	599 aa		4.67	□□□□□ -1.66
SEC9	YGR009C	UGA4	P32837	571 aa		4.67	□□□□□ -1.66
SEC9	YGR009C	CBT1	P36038	271 aa	Predicted RBP	4.67	□□□□□ -1.66
SEC9	YGR009C	YBR062C	P38239	180 aa		4.67	□□□□□ -1.66
SEC9	YGR009C	VHC1	P38329	1120 aa		4.67	□□□□□ -1.66
SEC9	YGR009C	POP4	P38336	279 aa		4.67	□□□□□ -1.66
SEC9	YGR009C	PFS1	P38872	237 aa		4.67	□□□□□ -1.66
SEC9	YGR009C	UIP3	P39547	235 aa		4.67	□□□□□ -1.66
SEC9	YGR009C	AST2	P39945	430 aa	Known RBP	4.67	□□□□□ -1.66
SEC9	YGR009C	AVT6	P40074	448 aa		4.67	□□□□□ -1.66
SEC9	YGR009C	CIN1	P40987	1014 aa		4.67	□□□□□ -1.66
SEC9	YGR009C	SER2	P42941	309 aa		4.67	□□□□□ -1.66
SEC9	YGR009C	PHO86	P46956	311 aa		4.67	□□□□□ -1.66
SEC9	YGR009C	HOC1	P47124	396 aa		4.67	□□□□□ -1.66
SEC9	YGR009C	YGL235W	P53071	178 aa		4.67	□□□□□ -1.66
SEC9	YGR009C	GET1	P53192	235 aa		4.67	□□□□□ -1.66
SEC9	YGR009C	GND2	P53319	492 aa		4.67	□□□□□ -1.66
SEC9	YGR009C	NMA111	P53920	997 aa		4.67	□□□□□ -1.66
SEC9	YGR009C	RPS15	Q01855	142 aa	Known RBP	4.67	□□□□□ -1.66
SEC9	YGR009C	SNU56	Q03782	492 aa	Known RBP	4.67	□□□□□ -1.66
SEC9	YGR009C	YPS7	Q06325	596 aa		4.67	□□□□□ -1.66
SEC9	YGR009C	INP54	Q08227	384 aa	Known RBP	4.67	□□□□□ -1.66
SEC9	YGR009C	HRK1	Q08732	759 aa	Known RBP	4.67	□□□□□ -1.66
SEC9	YGR009C	ELG1	Q12050	791 aa		4.67	□□□□□ -1.66
SEC9	YGR009C	RUP1	Q12242	671 aa		4.67	□□□□□ -1.66
SEC9	YGR009C	NDJ1	Q12366	352 aa		4.67	□□□□□ -1.66
SEC9	YGR009C	PSF1	Q12488	208 aa		4.67	□□□□□ -1.66
SEC9	YGR009C	DCP1	Q12517	231 aa	Predicted RBP	4.67	□□□□□ -1.66
SEC9	YGR009C	YOR111W	Q99210	232 aa		4.67	□□□□□ -1.66
SEC9	YGR009C	THP2	O13539	261 aa	Known RBP	4.66	□□□□□ -1.66
SEC9	YGR009C	ILV5	P06168	395 aa	Known RBP	4.66	□□□□□ -1.66
SEC9	YGR009C	HIS5	P07172	385 aa		4.66	□□□□□ -1.66
SEC9	YGR009C	TAF14	P35189	244 aa		4.66	□□□□□ -1.66
SEC9	YGR009C	ADD66	P36040	267 aa		4.66	□□□□□ -1.66
SEC9	YGR009C	LDB7	P38210	180 aa		4.66	□□□□□ -1.66
SEC9	YGR009C	VID24	P38263	362 aa		4.66	□□□□□ -1.66
SEC9	YGR009C	YBR220C	P38318	560 aa		4.66	□□□□□ -1.66
SEC9	YGR009C	YHR122W	P38829	231 aa		4.66	□□□□□ -1.66
SEC9	YGR009C	RRD1	P40454	393 aa	Known RBP	4.66	□□□□□ -1.66
SEC9	YGR009C	GTT1	P40582	234 aa		4.66	□□□□□ -1.66
SEC9	YGR009C	BAP3	P41815	604 aa		4.66	□□□□□ -1.66
SEC9	YGR009C	SWP82	P43554	623 aa		4.66	□□□□□ -1.66
SEC9	YGR009C	FMP32	P43557	207 aa		4.66	□□□□□ -1.66
SEC9	YGR009C	BIT61	P47041	543 aa		4.66	□□□□□ -1.66
SEC9	YGR009C	YJR030C	P47101	745 aa		4.66	□□□□□ -1.66
SEC9	YGR009C	YGL108C	P53139	140 aa		4.66	□□□□□ -1.66
SEC9	YGR009C	TRM112	P53738	135 aa	Predicted RBP	4.66	□□□□□ -1.66
SEC9	YGR009C	CAF40	P53829	373 aa		4.66	□□□□□ -1.66
SEC9	YGR009C	BUR2	Q05949	395 aa		4.66	□□□□□ -1.66
SEC9	YGR009C	RAD34	Q06665	692 aa		4.66	□□□□□ -1.66
SEC9	YGR009C	YDL086W	Q07505	273 aa		4.66	□□□□□ -1.66
SEC9	YGR009C	YOR114W	Q12219	294 aa		4.66	□□□□□ -1.66
SEC9	YGR009C	YOR029W	Q12243	111 aa		4.66	□□□□□ -1.66
SEC9	YGR009C	TPT1	Q12272	230 aa	Known RBP	4.66	□□□□□ -1.66
SEC9	YGR009C	HRT3	Q12347	344 aa		4.66	□□□□□ -1.66
SEC9	YGR009C	WTM1	Q12363	437 aa	Known RBP	4.66	□□□□□ -1.66
SEC9	YGR009C	OCA6	Q12454	224 aa		4.66	□□□□□ -1.66
SEC9	YGR009C	BUD4	P47136	1447 aa		4.66	□□□□□ -1.66
SEC9	YGR009C	AI3	P03877	415 aa		4.65	□□□□□ -1.66
SEC9	YGR009C	PUT2	P07275	575 aa		4.65	□□□□□ -1.66
SEC9	YGR009C	GAL3	P13045	520 aa		4.65	□□□□□ -1.66
SEC9	YGR009C	FPS1	P23900	669 aa		4.65	□□□□□ -1.66
SEC9	YGR009C	TCD2	P36101	447 aa	Known RBP	4.65	□□□□□ -1.66
SEC9	YGR009C	IML3	P38265	245 aa		4.65	□□□□□ -1.66
SEC9	YGR009C	END3	P39013	349 aa		4.65	□□□□□ -1.66
SEC9	YGR009C	SER33	P40510	469 aa		4.65	□□□□□ -1.66
SEC9	YGR009C	YAE1	P47118	141 aa	Predicted RBP	4.65	□□□□□ -1.66
SEC9	YGR009C	PHB2	P50085	310 aa		4.65	□□□□□ -1.66
SEC9	YGR009C	YTP1	P53584	459 aa		4.65	□□□□□ -1.66
SEC9	YGR009C	COS1	P53822	381 aa		4.65	□□□□□ -1.66
SEC9	YGR009C	ELP4	Q02884	456 aa	Known RBP	4.65	□□□□□ -1.66
SEC9	YGR009C	YLR177W	Q06251	628 aa		4.65	□□□□□ -1.66
SEC9	YGR009C	YPL199C	Q08954	240 aa		4.65	□□□□□ -1.66
SEC9	YGR009C	YPT1	P01123	206 aa	Known RBP	4.65	□□□□□ -1.67
SEC9	YGR009C	VPS33	P20795	691 aa		4.65	□□□□□ -1.67
SEC9	YGR009C	YIM1	P28625	365 aa		4.65	□□□□□ -1.67
SEC9	YGR009C	RGT1	P32862	1170 aa		4.65	□□□□□ -1.67
SEC9	YGR009C	SIP2	P34164	415 aa	Known RBP	4.65	□□□□□ -1.67
SEC9	YGR009C	SKT5	P34226	696 aa		4.65	□□□□□ -1.67
SEC9	YGR009C	RER2	P35196	286 aa		4.65	□□□□□ -1.67
SEC9	YGR009C	OAR1	P35731	278 aa		4.65	□□□□□ -1.67
SEC9	YGR009C	PET10	P36139	283 aa		4.65	□□□□□ -1.67
SEC9	YGR009C	MRPL15	P36523	253 aa		4.65	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 981.1 ms