RNA–Protein interactions for RNA: YDR243C

PRP28, Transcript of RNA helicase in the DEAD-box family, yeastyeast

Gene PRP28, Length 1,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP28YDR243C VAM3Q12241 283 aa4.3□□□□□ -1.72
PRP28YDR243C PSY3Q12318 242 aa4.3□□□□□ -1.72
PRP28YDR243C RRD2Q12461 358 aa4.3□□□□□ -1.72
PRP28YDR243C EFG1Q3E705 233 aaKnown RBP4.3□□□□□ -1.72
PRP28YDR243C MTR10Q99189 972 aa4.3□□□□□ -1.72
PRP28YDR243C AFI1Q99222 893 aa4.3□□□□□ -1.72
PRP28YDR243C ATP1P07251 545 aaKnown RBP4.3□□□□□ -1.72
PRP28YDR243C SEC53P07283 254 aaKnown RBP4.3□□□□□ -1.72
PRP28YDR243C MET16P18408 261 aaPredicted RBP4.3□□□□□ -1.72
PRP28YDR243C HOP1P20050 605 aa4.3□□□□□ -1.72
PRP28YDR243C ATP11P32453 318 aa4.3□□□□□ -1.72
PRP28YDR243C NGG1P32494 702 aa4.3□□□□□ -1.72
PRP28YDR243C LIP5P32875 414 aa4.3□□□□□ -1.72
PRP28YDR243C YNK1P36010 153 aaKnown RBP4.3□□□□□ -1.72
PRP28YDR243C IRS4P36115 615 aaKnown RBP4.3□□□□□ -1.72
PRP28YDR243C SHM2P37291 469 aaKnown RBP4.3□□□□□ -1.72
PRP28YDR243C GPX2P38143 162 aa4.3□□□□□ -1.72
PRP28YDR243C TCM62P38228 572 aaKnown RBP4.3□□□□□ -1.72
PRP28YDR243C DHH1P39517 506 aaKnown RBP4.3□□□□□ -1.72
PRP28YDR243C FHL1P39521 936 aa4.3□□□□□ -1.72
PRP28YDR243C PTI1P39927 425 aaPredicted RBP4.3□□□□□ -1.72
PRP28YDR243C MIT1P40002 666 aa4.3□□□□□ -1.72
PRP28YDR243C FAU1P40099 211 aa4.3□□□□□ -1.72
PRP28YDR243C AIM23P47015 356 aa4.3□□□□□ -1.72
PRP28YDR243C ECM27P47144 725 aa4.3□□□□□ -1.72
PRP28YDR243C RRN9P53437 365 aa4.3□□□□□ -1.72
PRP28YDR243C KTR6P54070 446 aa4.3□□□□□ -1.72
PRP28YDR243C NHX1Q04121 633 aa4.3□□□□□ -1.72
PRP28YDR243C YDR109CQ04585 715 aa4.3□□□□□ -1.72
PRP28YDR243C LDB18Q07887 179 aa4.3□□□□□ -1.72
PRP28YDR243C SDO1Q07953 250 aaKnown RBP4.3□□□□□ -1.72
PRP28YDR243C RRT8Q08219 342 aa4.3□□□□□ -1.72
PRP28YDR243C THI20Q08224 551 aa4.3□□□□□ -1.72
PRP28YDR243C YOL075CQ08234 1294 aa4.3□□□□□ -1.72
PRP28YDR243C TGS1Q12052 315 aa4.3□□□□□ -1.72
PRP28YDR243C LEU9Q12166 604 aaKnown RBP4.3□□□□□ -1.72
PRP28YDR243C TMA7Q3E764 64 aaKnown RBP4.3□□□□□ -1.72
PRP28YDR243C RGS2Q99188 309 aa4.3□□□□□ -1.72
PRP28YDR243C GAL4P04386 881 aa4.29□□□□□ -1.72
PRP28YDR243C DST1P07273 309 aa4.29□□□□□ -1.72
PRP28YDR243C TRP4P07285 380 aaPredicted RBP4.29□□□□□ -1.72
PRP28YDR243C SSA3P09435 649 aaKnown RBP4.29□□□□□ -1.72
PRP28YDR243C SPO16P17122 198 aa4.29□□□□□ -1.72
PRP28YDR243C DBR1P24309 405 aaKnown RBP4.29□□□□□ -1.72
PRP28YDR243C RNA14P25298 677 aaKnown RBP4.29□□□□□ -1.72
PRP28YDR243C RRP7P25368 297 aaPredicted RBP4.29□□□□□ -1.72
PRP28YDR243C EMC1P25574 760 aa4.29□□□□□ -1.72
PRP28YDR243C URA7P28274 579 aaKnown RBP4.29□□□□□ -1.72
PRP28YDR243C IDH1P28834 360 aaKnown RBP RIP-Chip data4.29□□□□□ -1.72not detected
PRP28YDR243C FAA1P30624 700 aaKnown RBP4.29□□□□□ -1.72
PRP28YDR243C GPI10P30777 616 aa4.29□□□□□ -1.72
PRP28YDR243C MCM10P32354 571 aa4.29□□□□□ -1.72
PRP28YDR243C FRE1P32791 686 aa4.29□□□□□ -1.72
PRP28YDR243C TSA1P34760 196 aaKnown RBP4.29□□□□□ -1.72
PRP28YDR243C SER2P42941 309 aa4.29□□□□□ -1.72
PRP28YDR243C CIT3P43635 486 aa4.29□□□□□ -1.72
PRP28YDR243C RPA34P47006 233 aaPredicted RBP4.29□□□□□ -1.72
PRP28YDR243C IRC8P47046 822 aa4.29□□□□□ -1.72
PRP28YDR243C IBA57P47158 497 aa4.29□□□□□ -1.72
PRP28YDR243C YGL039WP53183 348 aaKnown RBP4.29□□□□□ -1.72
PRP28YDR243C INN1P53901 409 aa4.29□□□□□ -1.72
PRP28YDR243C MET14Q02196 202 aa4.29□□□□□ -1.72
PRP28YDR243C GAS2Q06135 555 aa4.29□□□□□ -1.72
PRP28YDR243C HDA2Q06629 674 aa4.29□□□□□ -1.72
PRP28YDR243C SPO75Q07798 868 aa4.29□□□□□ -1.72
PRP28YDR243C REX4Q08237 289 aa4.29□□□□□ -1.72
PRP28YDR243C CSM4Q08955 156 aa4.29□□□□□ -1.72
PRP28YDR243C YOR022CQ12204 715 aa4.29□□□□□ -1.72
PRP28YDR243C SFM1Q12314 213 aa4.29□□□□□ -1.72
PRP28YDR243C YPR014CQ6B0W2 109 aa4.29□□□□□ -1.72
PRP28YDR243C CIT1P00890 479 aa4.28□□□□□ -1.72
PRP28YDR243C CDC36P06100 191 aaPredicted RBP4.28□□□□□ -1.72
PRP28YDR243C CDC6P09119 513 aa4.28□□□□□ -1.72
PRP28YDR243C TY1A-LR4P0C2I8 440 aaKnown RBP4.28□□□□□ -1.72
PRP28YDR243C TY1A-DR6P0CX70 440 aa4.28□□□□□ -1.72
PRP28YDR243C TY1A-ER1P0CX71 440 aa4.28□□□□□ -1.72
PRP28YDR243C TY1A-LR2P0CX72 440 aa4.28□□□□□ -1.72
PRP28YDR243C TY1A-PLP0CX73 440 aa4.28□□□□□ -1.72
PRP28YDR243C TY1A-JR1P0CX74 440 aa4.28□□□□□ -1.72
PRP28YDR243C TY1A-LR3P0CX75 440 aa4.28□□□□□ -1.72
PRP28YDR243C TY1A-ML2P0CX76 440 aa4.28□□□□□ -1.72
PRP28YDR243C MRP7P12687 371 aa4.28□□□□□ -1.72
PRP28YDR243C COQ1P18900 473 aa4.28□□□□□ -1.72
PRP28YDR243C DAL2P25335 343 aa4.28□□□□□ -1.72
PRP28YDR243C AGP1P25376 633 aa4.28□□□□□ -1.72
PRP28YDR243C YUR1P26725 428 aa4.28□□□□□ -1.72
PRP28YDR243C KTR3P38130 404 aaPredicted RBP4.28□□□□□ -1.72
PRP28YDR243C IKI1P38874 309 aa4.28□□□□□ -1.72
PRP28YDR243C GAB1P41733 394 aa4.28□□□□□ -1.72
PRP28YDR243C SIP4P46954 829 aa4.28□□□□□ -1.72
PRP28YDR243C PHO86P46956 311 aa4.28□□□□□ -1.72
PRP28YDR243C YAE1P47118 141 aaPredicted RBP4.28□□□□□ -1.72
PRP28YDR243C SNN1P48232 102 aa4.28□□□□□ -1.72
PRP28YDR243C CPR8P53728 308 aa4.28□□□□□ -1.72
PRP28YDR243C HXT11P54862 567 aa4.28□□□□□ -1.72
PRP28YDR243C SLD5Q03406 294 aa4.28□□□□□ -1.72
PRP28YDR243C CAC2Q04199 468 aa4.28□□□□□ -1.72
PRP28YDR243C THI7Q05998 598 aa4.28□□□□□ -1.72
PRP28YDR243C SCP1Q08873 200 aa4.28□□□□□ -1.72
PRP28YDR243C KEL3Q08979 651 aaPredicted RBP4.28□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms