RNA–Protein interactions for RNA: YDL003W

MCD1, Transcript of Essential alpha-kleisin subunit of the cohesin complex, yeastyeast

Gene MCD1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MCD1YDL003W SKG6P32900 734 aaPredicted RBP2.14□□□□□ -2.07
MCD1YDL003W PDR3P33200 976 aa2.14□□□□□ -2.07
MCD1YDL003W SPT10P35208 640 aa2.14□□□□□ -2.07
MCD1YDL003W YPT52P36018 234 aaKnown RBP2.14□□□□□ -2.07
MCD1YDL003W SRP102P36057 244 aaPredicted RBP2.14□□□□□ -2.07
MCD1YDL003W GRX7P38068 203 aa2.14□□□□□ -2.07
MCD1YDL003W FMP23P38231 175 aa2.14□□□□□ -2.07
MCD1YDL003W PCA1P38360 1216 aa2.14□□□□□ -2.07
MCD1YDL003W MMS21P38632 267 aa2.14□□□□□ -2.07
MCD1YDL003W YHR033WP38690 423 aa2.14□□□□□ -2.07
MCD1YDL003W IPI1P38803 334 aaPredicted RBP2.14□□□□□ -2.07
MCD1YDL003W BIG1P38813 335 aa2.14□□□□□ -2.07
MCD1YDL003W SBE22P38814 852 aa2.14□□□□□ -2.07
MCD1YDL003W END3P39013 349 aa2.14□□□□□ -2.07
MCD1YDL003W YJR061WP40355 935 aa2.14□□□□□ -2.07
MCD1YDL003W AGE2P40529 298 aa2.14□□□□□ -2.07
MCD1YDL003W PRM2P40534 656 aa2.14□□□□□ -2.07
MCD1YDL003W TIR3P40552 269 aa2.14□□□□□ -2.07
MCD1YDL003W SKP2P42843 763 aa2.14□□□□□ -2.07
MCD1YDL003W SER2P42941 309 aa2.14□□□□□ -2.07
MCD1YDL003W RET2P43621 546 aa2.14□□□□□ -2.07
MCD1YDL003W BUD13P46947 266 aaPredicted RBP2.14□□□□□ -2.07
MCD1YDL003W AIM24P47127 394 aa2.14□□□□□ -2.07
MCD1YDL003W ECM27P47144 725 aa2.14□□□□□ -2.07
MCD1YDL003W HLJ1P48353 224 aa2.14□□□□□ -2.07
MCD1YDL003W PAC10P48363 199 aa2.14□□□□□ -2.07
MCD1YDL003W YML6P51998 286 aa2.14□□□□□ -2.07
MCD1YDL003W COG1P53079 417 aa2.14□□□□□ -2.07
MCD1YDL003W PEX8P53248 589 aa2.14□□□□□ -2.07
MCD1YDL003W ARL3Q02804 198 aa2.14□□□□□ -2.07
MCD1YDL003W RRN5Q02983 363 aa2.14□□□□□ -2.07
MCD1YDL003W SVL3Q03088 825 aaKnown RBP2.14□□□□□ -2.07
MCD1YDL003W TDA1Q03533 586 aa2.14□□□□□ -2.07
MCD1YDL003W TRS130Q03660 1102 aa2.14□□□□□ -2.07
MCD1YDL003W YDR249CQ03787 373 aa2.14□□□□□ -2.07
MCD1YDL003W ATG16Q03818 150 aa2.14□□□□□ -2.07
MCD1YDL003W CYK3Q07533 885 aa2.14□□□□□ -2.07
MCD1YDL003W GRX6Q12438 231 aa2.14□□□□□ -2.07
MCD1YDL003W AI5_BETAQ9ZZX0 354 aa2.14□□□□□ -2.07
MCD1YDL003W UTP10P42945 1769 aaKnown RBP2.13□□□□□ -2.07
MCD1YDL003W TY1B-JR2P47100 1755 aaKnown RBP2.13□□□□□ -2.07
MCD1YDL003W TY1B-ER2Q03619 1755 aa2.13□□□□□ -2.07
MCD1YDL003W TY1B-MR1Q04214 1755 aa2.13□□□□□ -2.07
MCD1YDL003W TY1B-MR2Q04670 1755 aaKnown RBP2.13□□□□□ -2.07
MCD1YDL003W TY1B-LR1Q12088 1755 aaKnown RBP2.13□□□□□ -2.07
MCD1YDL003W TY1B-NL1Q12112 1755 aa2.13□□□□□ -2.07
MCD1YDL003W TY1B-GR1Q12141 1755 aa2.13□□□□□ -2.07
MCD1YDL003W TY1B-BLQ12490 1755 aa2.13□□□□□ -2.07
MCD1YDL003W GCN4P03069 281 aa2.13□□□□□ -2.07
MCD1YDL003W RPL25P04456 142 aaKnown RBP2.13□□□□□ -2.07
MCD1YDL003W TPK3P05986 398 aa2.13□□□□□ -2.07
MCD1YDL003W STE3P06783 470 aa2.13□□□□□ -2.07
MCD1YDL003W IMA3P0CW40 589 aa2.13□□□□□ -2.07
MCD1YDL003W IMA4P0CW41 589 aa2.13□□□□□ -2.07
MCD1YDL003W MAS1P10507 462 aa2.13□□□□□ -2.07
MCD1YDL003W HEM15P16622 393 aa2.13□□□□□ -2.07
MCD1YDL003W CBF1P17106 351 aa2.13□□□□□ -2.07
MCD1YDL003W PHO81P17442 1178 aa2.13□□□□□ -2.07
MCD1YDL003W ACO1P19414 778 aaKnown RBP RIP-Chip data2.13□□□□□ -2.07not detected
MCD1YDL003W BET2P20133 325 aa2.13□□□□□ -2.07
MCD1YDL003W MAG1P22134 296 aaKnown RBP2.13□□□□□ -2.07
MCD1YDL003W RIT1P23796 513 aa2.13□□□□□ -2.07
MCD1YDL003W RPL24BP24000 155 aaKnown RBP2.13□□□□□ -2.07
MCD1YDL003W CSM1P25651 190 aa2.13□□□□□ -2.07
MCD1YDL003W GPI10P30777 616 aa2.13□□□□□ -2.07
MCD1YDL003W NTG1P31378 399 aa2.13□□□□□ -2.07
MCD1YDL003W FUN26P31381 517 aa2.13□□□□□ -2.07
MCD1YDL003W NDC1P32500 655 aa2.13□□□□□ -2.07
MCD1YDL003W SIP1P32578 815 aa2.13□□□□□ -2.07
MCD1YDL003W CYS4P32582 507 aaKnown RBP2.13□□□□□ -2.07
MCD1YDL003W UTR4P32626 227 aa2.13□□□□□ -2.07
MCD1YDL003W JEN1P36035 616 aa2.13□□□□□ -2.07
MCD1YDL003W FMP46P36141 133 aaKnown RBP2.13□□□□□ -2.07
MCD1YDL003W MRPL36P36531 177 aa2.13□□□□□ -2.07
MCD1YDL003W APM3P38153 483 aa2.13□□□□□ -2.07
MCD1YDL003W EHT1P38295 451 aa2.13□□□□□ -2.07
MCD1YDL003W YBR285WP38354 144 aa2.13□□□□□ -2.07
MCD1YDL003W PRS2P38620 318 aaKnown RBP2.13□□□□□ -2.07
MCD1YDL003W COS8P38723 381 aa2.13□□□□□ -2.07
MCD1YDL003W LRO1P40345 661 aa2.13□□□□□ -2.07
MCD1YDL003W YIL169CP40442 995 aa2.13□□□□□ -2.07
MCD1YDL003W CIN1P40987 1014 aa2.13□□□□□ -2.07
MCD1YDL003W RPE1P46969 238 aa2.13□□□□□ -2.07
MCD1YDL003W RTT101P47050 842 aa2.13□□□□□ -2.07
MCD1YDL003W YJR008WP47085 338 aa2.13□□□□□ -2.07
MCD1YDL003W YJR030CP47101 745 aa2.13□□□□□ -2.07
MCD1YDL003W NNF1P47149 201 aa2.13□□□□□ -2.07
MCD1YDL003W RPS7BP48164 190 aaKnown RBP2.13□□□□□ -2.07
MCD1YDL003W TOM22P49334 152 aa2.13□□□□□ -2.07
MCD1YDL003W ORC5P50874 479 aa2.13□□□□□ -2.07
MCD1YDL003W NBP1P52919 319 aaPredicted RBP2.13□□□□□ -2.07
MCD1YDL003W SLD3P53135 668 aa2.13□□□□□ -2.07
MCD1YDL003W JAC1P53193 184 aa2.13□□□□□ -2.07
MCD1YDL003W YTP1P53584 459 aa2.13□□□□□ -2.07
MCD1YDL003W RET3P53600 189 aa2.13□□□□□ -2.07
MCD1YDL003W BIO4P53630 237 aa2.13□□□□□ -2.07
MCD1YDL003W CWC27Q02770 301 aa2.13□□□□□ -2.07
MCD1YDL003W TRM82Q03774 444 aa2.13□□□□□ -2.07
MCD1YDL003W TVP15Q03860 143 aa2.13□□□□□ -2.07
MCD1YDL003W YET2Q04210 160 aa2.13□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 45.9 ms