RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDB1YBR221C NPA3P47122 385 aa5.37□□□□□ -1.55
PDB1YBR221C YGL039WP53183 348 aaKnown RBP5.37□□□□□ -1.55
PDB1YBR221C SPP2Q02521 185 aa5.37□□□□□ -1.55
PDB1YBR221C NUP116Q02630 1113 aa5.37□□□□□ -1.55
PDB1YBR221C CTF19Q02732 369 aa5.37□□□□□ -1.55
PDB1YBR221C NSE1Q07913 336 aa5.37□□□□□ -1.55
PDB1YBR221C DIS3Q08162 1001 aaKnown RBP5.37□□□□□ -1.55
PDB1YBR221C ESA1Q08649 445 aa5.37□□□□□ -1.55
PDB1YBR221C PUF2Q12221 1075 aaKnown RBP RIP-Chip data5.37□□□□□ -1.55not detected
PDB1YBR221C VAM3Q12241 283 aa5.37□□□□□ -1.55
PDB1YBR221C ERP3Q12403 225 aa5.37□□□□□ -1.55
PDB1YBR221C TRM11Q12463 433 aa5.37□□□□□ -1.55
PDB1YBR221C TUB3P09734 445 aaKnown RBP5.36□□□□□ -1.55
PDB1YBR221C YML003WP0CF16 290 aa5.36□□□□□ -1.55
PDB1YBR221C MAS1P10507 462 aa5.36□□□□□ -1.55
PDB1YBR221C MRP13P12686 339 aa5.36□□□□□ -1.55
PDB1YBR221C ABF1P14164 731 aa5.36□□□□□ -1.55
PDB1YBR221C FRS2P15625 503 aaKnown RBP5.36□□□□□ -1.55
PDB1YBR221C ALG1P16661 449 aa5.36□□□□□ -1.55
PDB1YBR221C GSH1P32477 678 aa5.36□□□□□ -1.55
PDB1YBR221C SPS19P32573 292 aaKnown RBP5.36□□□□□ -1.55
PDB1YBR221C YSC84P32793 468 aa5.36□□□□□ -1.55
PDB1YBR221C CPR5P35176 225 aa5.36□□□□□ -1.55
PDB1YBR221C NNK1P36003 928 aa5.36□□□□□ -1.55
PDB1YBR221C MRPL16P38064 232 aa5.36□□□□□ -1.55
PDB1YBR221C RIB1P38066 345 aa5.36□□□□□ -1.55
PDB1YBR221C OLA1P38219 394 aaKnown RBP5.36□□□□□ -1.55
PDB1YBR221C PHO88P38264 188 aaPredicted RBP5.36□□□□□ -1.55
PDB1YBR221C EHT1P38295 451 aa5.36□□□□□ -1.55
PDB1YBR221C OSH3P38713 996 aaKnown RBP5.36□□□□□ -1.55
PDB1YBR221C PRP39P39682 629 aaKnown RBP5.36□□□□□ -1.55
PDB1YBR221C STE24P47154 453 aa5.36□□□□□ -1.55
PDB1YBR221C AMA1P50082 593 aa5.36□□□□□ -1.55
PDB1YBR221C YGL117WP53133 265 aa5.36□□□□□ -1.55
PDB1YBR221C YGR042WP53227 271 aa5.36□□□□□ -1.55
PDB1YBR221C REC102Q02721 264 aa5.36□□□□□ -1.55
PDB1YBR221C SHR3Q02774 210 aa5.36□□□□□ -1.55
PDB1YBR221C CDC123Q05791 360 aa5.36□□□□□ -1.55
PDB1YBR221C GEP3Q08622 556 aa5.36□□□□□ -1.55
PDB1YBR221C GPM2Q12008 311 aa5.36□□□□□ -1.55
PDB1YBR221C SLF1Q12034 447 aaKnown RBP5.36□□□□□ -1.55
PDB1YBR221C YDR262WQ12331 272 aa5.36□□□□□ -1.55
PDB1YBR221C LSO2Q3E772 92 aaKnown RBP5.36□□□□□ -1.55
PDB1YBR221C UBA3Q99344 299 aa5.36□□□□□ -1.55
PDB1YBR221C THP2O13539 261 aaKnown RBP5.35□□□□□ -1.55
PDB1YBR221C MRP10O75012 95 aa5.35□□□□□ -1.55
PDB1YBR221C PUT2P07275 575 aa5.35□□□□□ -1.55
PDB1YBR221C RPS16AP0CX51 143 aaKnown RBP5.35□□□□□ -1.55
PDB1YBR221C RPS16BP0CX52 143 aaKnown RBP5.35□□□□□ -1.55
PDB1YBR221C REV1P12689 985 aa5.35□□□□□ -1.55
PDB1YBR221C SNA3P14359 133 aa5.35□□□□□ -1.55
PDB1YBR221C SAM2P19358 384 aaKnown RBP5.35□□□□□ -1.55
PDB1YBR221C TKL1P23254 680 aaKnown RBP5.35□□□□□ -1.55
PDB1YBR221C KIN82P25341 720 aa5.35□□□□□ -1.55
PDB1YBR221C IMG1P25626 169 aa5.35□□□□□ -1.55
PDB1YBR221C VMA6P32366 345 aaKnown RBP5.35□□□□□ -1.55
PDB1YBR221C SSO1P32867 290 aa5.35□□□□□ -1.55
PDB1YBR221C CSE1P33307 960 aa5.35□□□□□ -1.55
PDB1YBR221C YBR144CP34215 104 aa5.35□□□□□ -1.55
PDB1YBR221C SHP1P34223 423 aa5.35□□□□□ -1.55
PDB1YBR221C CBT1P36038 271 aaPredicted RBP5.35□□□□□ -1.55
PDB1YBR221C MNN2P38069 597 aa5.35□□□□□ -1.55
PDB1YBR221C DTR1P38125 572 aa5.35□□□□□ -1.55
PDB1YBR221C BMT2P38278 337 aa5.35□□□□□ -1.55
PDB1YBR221C OSH7P38755 437 aa5.35□□□□□ -1.55
PDB1YBR221C CRG1P38892 291 aaRIP-Chip data5.35□□□□□ -1.55not detected
PDB1YBR221C BUR6P40096 142 aa5.35□□□□□ -1.55
PDB1YBR221C SDP1P40479 209 aa5.35□□□□□ -1.55
PDB1YBR221C TFG2P41896 400 aaPredicted RBP5.35□□□□□ -1.55
PDB1YBR221C SPG5P42933 373 aa5.35□□□□□ -1.55
PDB1YBR221C YFL066CP43538 392 aa5.35□□□□□ -1.55
PDB1YBR221C FAR3P46671 204 aa5.35□□□□□ -1.55
PDB1YBR221C MRX5P47007 382 aa5.35□□□□□ -1.55
PDB1YBR221C RPS7BP48164 190 aaKnown RBP5.35□□□□□ -1.55
PDB1YBR221C AZR1P50080 613 aa5.35□□□□□ -1.55
PDB1YBR221C COS12P53053 380 aa5.35□□□□□ -1.55
PDB1YBR221C ROG1P53118 685 aa5.35□□□□□ -1.55
PDB1YBR221C OCA2P53949 197 aa5.35□□□□□ -1.55
PDB1YBR221C EFM6P53970 246 aa5.35□□□□□ -1.55
PDB1YBR221C SKI8Q02793 397 aaPredicted RBP5.35□□□□□ -1.55
PDB1YBR221C GCN5Q03330 439 aa5.35□□□□□ -1.55
PDB1YBR221C MSC2Q03455 724 aa5.35□□□□□ -1.55
PDB1YBR221C EMI2Q04409 500 aaKnown RBP5.35□□□□□ -1.55
PDB1YBR221C YMR321CQ04898 105 aa5.35□□□□□ -1.55
PDB1YBR221C FAR8Q05040 523 aa5.35□□□□□ -1.55
PDB1YBR221C YFT2Q06676 274 aa5.35□□□□□ -1.55
PDB1YBR221C CDA1Q06702 301 aa5.35□□□□□ -1.55
PDB1YBR221C YDL176WQ12027 708 aa5.35□□□□□ -1.55
PDB1YBR221C PRP46Q12417 451 aaPredicted RBP5.35□□□□□ -1.55
PDB1YBR221C NOT5Q12514 560 aaPredicted RBP5.35□□□□□ -1.55
PDB1YBR221C YDR461C-AQ2V2P7 80 aa5.35□□□□□ -1.55
PDB1YBR221C ART10P18634 518 aaKnown RBP5.34□□□□□ -1.55
PDB1YBR221C GPI12P23797 304 aa5.34□□□□□ -1.55
PDB1YBR221C RRT12P25381 491 aa5.34□□□□□ -1.55
PDB1YBR221C PTC6P25646 442 aa5.34□□□□□ -1.55
PDB1YBR221C CSM1P25651 190 aa5.34□□□□□ -1.55
PDB1YBR221C MSS51P32335 436 aa5.34□□□□□ -1.55
PDB1YBR221C REC114P32841 428 aa5.34□□□□□ -1.55
PDB1YBR221C LIP5P32875 414 aa5.34□□□□□ -1.55
PDB1YBR221C MNS1P32906 549 aa5.34□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms