RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 TAF2Q6P1X5 1199 aa12.77□□□□□ -0.37
TARDBP-221ENST00000619555 DHX32Q7L7V1 743 aaKnown RBP12.77□□□□□ -0.37
TARDBP-221ENST00000619555 RPAINQ86UA6 219 aa12.77□□□□□ -0.37
TARDBP-221ENST00000619555 APBB2Q92870 758 aa12.77□□□□□ -0.37
TARDBP-221ENST00000619555 MXRA8Q9BRK3 442 aa12.77□□□□□ -0.37
TARDBP-221ENST00000619555 UBE2ZQ9H832 354 aaPredicted RBP12.77□□□□□ -0.37
TARDBP-221ENST00000619555 EHMT1Q9H9B1 1298 aa12.77□□□□□ -0.37
TARDBP-221ENST00000619555 JPH1Q9HDC5 661 aaPredicted RBP12.77□□□□□ -0.37
TARDBP-221ENST00000619555 KCNH7Q9NS40 1196 aa12.77□□□□□ -0.37
TARDBP-221ENST00000619555 TUBE1Q9UJT0 475 aa12.77□□□□□ -0.37
TARDBP-221ENST00000619555 TTC3P53804 2025 aa12.76□□□□□ -0.37
TARDBP-221ENST00000619555 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.76□□□□□ -0.37
TARDBP-221ENST00000619555 MBLAC1A4D2B0 266 aaPredicted RBP12.76□□□□□ -0.37
TARDBP-221ENST00000619555 MAFGO15525 162 aa12.76□□□□□ -0.37
TARDBP-221ENST00000619555 ZBTB43O43298 467 aa12.76□□□□□ -0.37
TARDBP-221ENST00000619555 INSRRP14616 1297 aa12.76□□□□□ -0.37
TARDBP-221ENST00000619555 GPM6BQ13491 265 aa12.76□□□□□ -0.37
TARDBP-221ENST00000619555 RSPH3Q86UC2 560 aa12.76□□□□□ -0.37
TARDBP-221ENST00000619555 TMEM192Q8IY95 271 aa12.76□□□□□ -0.37
TARDBP-221ENST00000619555 MRPL38Q96DV4 380 aaKnown RBP12.76□□□□□ -0.37
TARDBP-221ENST00000619555 IL17RAQ96F46 866 aa12.76□□□□□ -0.37
TARDBP-221ENST00000619555 SAMD11Q96NU1 681 aa12.76□□□□□ -0.37
TARDBP-221ENST00000619555 EPHX3Q9H6B9 360 aa12.76□□□□□ -0.37
TARDBP-221ENST00000619555 RIC8AQ9NPQ8 531 aa12.76□□□□□ -0.37
TARDBP-221ENST00000619555 FAM217BQ9NTX9 383 aaPredicted RBP12.76□□□□□ -0.37
TARDBP-221ENST00000619555 RBM28Q9NW13 759 aaKnown RBP12.76□□□□□ -0.37
TARDBP-221ENST00000619555 TMEM260Q9NX78 707 aa12.76□□□□□ -0.37
TARDBP-221ENST00000619555 SLC9A2Q9UBY0 812 aa12.76□□□□□ -0.37
TARDBP-221ENST00000619555 CDY2AQ9Y6F7 541 aa12.76□□□□□ -0.37
TARDBP-221ENST00000619555 NLRC5Q86WI3 1866 aa12.76□□□□□ -0.37
TARDBP-221ENST00000619555 KLF18A0A0U1RQI7 1052 aa12.75□□□□□ -0.37
TARDBP-221ENST00000619555 SMCO2A6NFE2 343 aa12.75□□□□□ -0.37
TARDBP-221ENST00000619555 H3BNC9 293 aa12.75□□□□□ -0.37
TARDBP-221ENST00000619555 STXBP3O00186 592 aa12.75□□□□□ -0.37
TARDBP-221ENST00000619555 ENPP3O14638 875 aa12.75□□□□□ -0.37
TARDBP-221ENST00000619555 KCNA5P22460 613 aa12.75□□□□□ -0.37
TARDBP-221ENST00000619555 CDC27P30260 824 aa12.75□□□□□ -0.37
TARDBP-221ENST00000619555 ADCY7P51828 1080 aa12.75□□□□□ -0.37
TARDBP-221ENST00000619555 ACTR2P61160 394 aa12.75□□□□□ -0.37
TARDBP-221ENST00000619555 MRPS6P82932 125 aaKnown RBP12.75□□□□□ -0.37
TARDBP-221ENST00000619555 ITGB3BPQ13352 177 aaPredicted RBP12.75□□□□□ -0.37
TARDBP-221ENST00000619555 PLCB4Q15147 1175 aa12.75□□□□□ -0.37
TARDBP-221ENST00000619555 TSGA10IPQ3SY00 556 aa12.75□□□□□ -0.37
TARDBP-221ENST00000619555 FBXO47Q5MNV8 452 aa12.75□□□□□ -0.37
TARDBP-221ENST00000619555 LOXHD1Q8IVV2 1947 aa12.75□□□□□ -0.37
TARDBP-221ENST00000619555 TRAPPC12Q8WVT3 735 aa12.75□□□□□ -0.37
TARDBP-221ENST00000619555 ANO3Q9BYT9 981 aa12.75□□□□□ -0.37
TARDBP-221ENST00000619555 FAM49AQ9H0Q0 323 aaPredicted RBP12.75□□□□□ -0.37
TARDBP-221ENST00000619555 AGO3Q9H9G7 860 aaKnown RBP12.75□□□□□ -0.37
TARDBP-221ENST00000619555 NFASCO94856 1347 aa12.74□□□□□ -0.37
TARDBP-221ENST00000619555 RRN3P2A6NIE6 340 aa12.74□□□□□ -0.37
TARDBP-221ENST00000619555 GOLGA8AA7E2F4 631 aa12.74□□□□□ -0.37
TARDBP-221ENST00000619555 GOLGA8BA8MQT2 603 aa12.74□□□□□ -0.37
TARDBP-221ENST00000619555 FOSP01100 380 aaPredicted RBP12.74□□□□□ -0.37
TARDBP-221ENST00000619555 CPA1P15085 419 aa12.74□□□□□ -0.37
TARDBP-221ENST00000619555 TMEM62Q0P6H9 643 aa12.74□□□□□ -0.37
TARDBP-221ENST00000619555 PTPROQ16827 1216 aa12.74□□□□□ -0.37
TARDBP-221ENST00000619555 CEP55Q53EZ4 464 aa12.74□□□□□ -0.37
TARDBP-221ENST00000619555 PPP1R18Q6NYC8 613 aa12.74□□□□□ -0.37
TARDBP-221ENST00000619555 FIBCD1Q8N539 461 aa12.74□□□□□ -0.37
TARDBP-221ENST00000619555 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.74□□□□□ -0.37
TARDBP-221ENST00000619555 KHSRPQ92945 711 aaKnown RBP eCLIP12.74□□□□□ -0.371e-9■□□□□ 11
TARDBP-221ENST00000619555 SDF4Q9BRK5 362 aa12.74□□□□□ -0.37
TARDBP-221ENST00000619555 AZI2Q9H6S1 392 aa12.74□□□□□ -0.37
TARDBP-221ENST00000619555 AGO4Q9HCK5 861 aaKnown RBP12.74□□□□□ -0.37
TARDBP-221ENST00000619555 CD320Q9NPF0 282 aa12.74□□□□□ -0.37
TARDBP-221ENST00000619555 BARHL2Q9NY43 387 aa12.74□□□□□ -0.37
TARDBP-221ENST00000619555 NAP1L2Q9ULW6 460 aaPredicted RBP12.74□□□□□ -0.37
TARDBP-221ENST00000619555 TRPC6Q9Y210 931 aa12.74□□□□□ -0.37
TARDBP-221ENST00000619555 DDX39AO00148 427 aaKnown RBP12.73□□□□□ -0.37
TARDBP-221ENST00000619555 MEIS1O00470 390 aa12.73□□□□□ -0.37
TARDBP-221ENST00000619555 ADAMTS3O15072 1205 aa12.73□□□□□ -0.37
TARDBP-221ENST00000619555 LINC00271P0C7V0 271 aa12.73□□□□□ -0.37
TARDBP-221ENST00000619555 CD52P31358 61 aa12.73□□□□□ -0.37
TARDBP-221ENST00000619555 ADD1P35611 737 aaKnown RBP12.73□□□□□ -0.37
TARDBP-221ENST00000619555 STAT5BP51692 787 aa12.73□□□□□ -0.37
TARDBP-221ENST00000619555 LEXMQ3ZCV2 418 aa12.73□□□□□ -0.37
TARDBP-221ENST00000619555 TCEAL5Q5H9L2 206 aa12.73□□□□□ -0.37
TARDBP-221ENST00000619555 JAKMIP3Q5VZ66 844 aa12.73□□□□□ -0.37
TARDBP-221ENST00000619555 TSHZ1Q6ZSZ6 1077 aa12.73□□□□□ -0.37
TARDBP-221ENST00000619555 PLPPR4Q7Z2D5 763 aa12.73□□□□□ -0.37
TARDBP-221ENST00000619555 RTN4RL1Q86UN2 441 aaPredicted RBP12.73□□□□□ -0.37
TARDBP-221ENST00000619555 BANK1Q8NDB2 785 aa12.73□□□□□ -0.37
TARDBP-221ENST00000619555 LINC01599Q8WXQ3 324 aa12.73□□□□□ -0.37
TARDBP-221ENST00000619555 UIMC1Q96RL1 719 aa12.73□□□□□ -0.37
TARDBP-221ENST00000619555 PCDHA2Q9Y5H9 948 aa12.73□□□□□ -0.37
TARDBP-221ENST00000619555 EVPLQ92817 2033 aa12.72□□□□□ -0.37
TARDBP-221ENST00000619555 RALGAPA2Q2PPJ7 1873 aa12.72□□□□□ -0.37
TARDBP-221ENST00000619555 H3BQ06 376 aaPredicted RBP12.72□□□□□ -0.37
TARDBP-221ENST00000619555 ATG7O95352 703 aa12.72□□□□□ -0.37
TARDBP-221ENST00000619555 CCNE2O96020 404 aa12.72□□□□□ -0.37
TARDBP-221ENST00000619555 IL9P15248 144 aa12.72□□□□□ -0.37
TARDBP-221ENST00000619555 CTNNB1P35222 781 aa12.72□□□□□ -0.37
TARDBP-221ENST00000619555 ZNF76P36508 570 aa12.72□□□□□ -0.37
TARDBP-221ENST00000619555 SREBF1P36956 1147 aa12.72□□□□□ -0.37
TARDBP-221ENST00000619555 CLK2P49760 499 aaKnown RBP12.72□□□□□ -0.37
TARDBP-221ENST00000619555 APOBRQ0VD83 1088 aa12.72□□□□□ -0.37
TARDBP-221ENST00000619555 AP3B2Q13367 1082 aa12.72□□□□□ -0.37
TARDBP-221ENST00000619555 KRT32Q14532 448 aa12.72□□□□□ -0.37
TARDBP-221ENST00000619555 TIGD5Q53EQ6 642 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms