RNA–Protein interactions for RNA: ENST00000602251.5

LTBP4-231, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 2

Gene LTBP4, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-231	ENST00000602251	STAG2	Q8N3U4	1231 aa		21.3	■■□□□ 1
LTBP4-231	ENST00000602251	MTMR8	Q96EF0	704 aa		21.3	■■□□□ 1
LTBP4-231	ENST00000602251	RPGRIP1	Q96KN7	1286 aa		21.3	■■□□□ 1
LTBP4-231	ENST00000602251	IL25	Q9H293	177 aa		21.3	■■□□□ 1
LTBP4-231	ENST00000602251	BARX2	Q9UMQ3	279 aa	Predicted RBP	21.3	■■□□□ 1
LTBP4-231	ENST00000602251	DCHS1	Q96JQ0	3298 aa		21.3	■■□□□ 1
LTBP4-231	ENST00000602251	NRCAM	Q92823	1304 aa		21.29	■■□□□ 1
LTBP4-231	ENST00000602251	SGSM2	O43147	1006 aa		21.29	■■□□□ 1
LTBP4-231	ENST00000602251	ICAM3	P32942	547 aa		21.29	■■□□□ 1
LTBP4-231	ENST00000602251	NT5C2	P49902	561 aa		21.29	■■□□□ 1
LTBP4-231	ENST00000602251	MGAT3	Q09327	533 aa		21.29	■■□□□ 1
LTBP4-231	ENST00000602251	NEDD9	Q14511	834 aa		21.29	■■□□□ 1
LTBP4-231	ENST00000602251	RUFY4	Q6ZNE9	571 aa		21.29	■■□□□ 1
LTBP4-231	ENST00000602251	RBM23	Q86U06	439 aa	Known RBP	21.29	■■□□□ 1
LTBP4-231	ENST00000602251	FCHSD1	Q86WN1	690 aa		21.29	■■□□□ 1
LTBP4-231	ENST00000602251	KLHL23	Q8NBE8	558 aa		21.29	■■□□□ 1
LTBP4-231	ENST00000602251	ZNF215	Q9UL58	517 aa	Predicted RBP	21.29	■■□□□ 1
LTBP4-231	ENST00000602251	TELO2	Q9Y4R8	837 aa		21.29	■■□□□ 1
LTBP4-231	ENST00000602251	SPATA31C2	B4DYI2	1134 aa		21.28	■■□□□ 1
LTBP4-231	ENST00000602251	ZBTB5	O15062	677 aa		21.28	■■□□□ 1
LTBP4-231	ENST00000602251	MRPS9	P82933	396 aa	Known RBP	21.28	■■□□□ 1
LTBP4-231	ENST00000602251	UTP14C	Q5TAP6	766 aa	Known RBP	21.28	■■□□□ 1
LTBP4-231	ENST00000602251	CMTR2	Q8IYT2	770 aa	Known RBP	21.28	■■□□□ 1
LTBP4-231	ENST00000602251	CRIPAK	Q8N1N5	446 aa		21.28	■■□□□ 1
LTBP4-231	ENST00000602251	POF1B	Q8WVV4	589 aa		21.28	■■□□□ 1
LTBP4-231	ENST00000602251	INPP4A	Q96PE3	977 aa	Predicted RBP	21.28	■■□□□ 1
LTBP4-231	ENST00000602251	ZSWIM5	Q9P217	1185 aa		21.28	■■□□□ 1
LTBP4-231	ENST00000602251	FAM186A	A6NE01	2351 aa		21.28	■■□□□ 1
LTBP4-231	ENST00000602251	KLRF2	D3W0D1	207 aa		21.27	■■□□□ 1
LTBP4-231	ENST00000602251		H0Y858	1186 aa		21.27	■■□□□ 1
LTBP4-231	ENST00000602251	GCOM1	H8Y6P7	765 aa	Predicted RBP	21.27	■■□□□ 1
LTBP4-231	ENST00000602251	POLR2M	P0CAP2	368 aa		21.27	■■□□□ 1
LTBP4-231	ENST00000602251	SEMA3F	Q13275	785 aa		21.27	■■□□□ 1
LTBP4-231	ENST00000602251	GNPTAB	Q3T906	1256 aa		21.27	■■□□□ 1
LTBP4-231	ENST00000602251	FBXO47	Q5MNV8	452 aa		21.27	■■□□□ 1
LTBP4-231	ENST00000602251	TAF2	Q6P1X5	1199 aa		21.27	■■□□□ 1
LTBP4-231	ENST00000602251	LINC01599	Q8WXQ3	324 aa		21.27	■■□□□ 1
LTBP4-231	ENST00000602251	TLR9	Q9NR96	1032 aa		21.27	■■□□□ 1
LTBP4-231	ENST00000602251		U3KPZ7	1027 aa	Predicted RBP	21.27	■■□□□ 1
LTBP4-231	ENST00000602251		B4E1Z4	1266 aa		21.26	■□□□□ 0.99
LTBP4-231	ENST00000602251	PROB1	E7EW31	1015 aa		21.26	■□□□□ 0.99
LTBP4-231	ENST00000602251	ATF7	P17544	494 aa	Predicted RBP	21.26	■□□□□ 0.99
LTBP4-231	ENST00000602251	RTN4RL1	Q86UN2	441 aa	Predicted RBP	21.26	■□□□□ 0.99
LTBP4-231	ENST00000602251	SUSD6	Q92537	303 aa		21.26	■□□□□ 0.99
LTBP4-231	ENST00000602251	CNNM2	Q9H8M5	875 aa		21.26	■□□□□ 0.99
LTBP4-231	ENST00000602251	AGO3	Q9H9G7	860 aa	Known RBP	21.26	■□□□□ 0.99
LTBP4-231	ENST00000602251	PCDHGC5	Q9Y5F6	944 aa		21.26	■□□□□ 0.99
LTBP4-231	ENST00000602251	STAM2	O75886	525 aa		21.25	■□□□□ 0.99
LTBP4-231	ENST00000602251	PTH1R	Q03431	593 aa		21.25	■□□□□ 0.99
LTBP4-231	ENST00000602251	PTPN21	Q16825	1174 aa		21.25	■□□□□ 0.99
LTBP4-231	ENST00000602251	TSHZ1	Q6ZSZ6	1077 aa		21.25	■□□□□ 0.99
LTBP4-231	ENST00000602251	RSPH3	Q86UC2	560 aa		21.25	■□□□□ 0.99
LTBP4-231	ENST00000602251	KRT23	Q9C075	422 aa		21.25	■□□□□ 0.99
LTBP4-231	ENST00000602251	TLE6	Q9H808	572 aa		21.25	■□□□□ 0.99
LTBP4-231	ENST00000602251	RTEL1	Q9NZ71	1219 aa		21.25	■□□□□ 0.99
LTBP4-231	ENST00000602251	KAT6A	Q92794	2004 aa		21.24	■□□□□ 0.99
LTBP4-231	ENST00000602251	FIBP	O43427	364 aa		21.24	■□□□□ 0.99
LTBP4-231	ENST00000602251	NUBP1	P53384	320 aa		21.24	■□□□□ 0.99
LTBP4-231	ENST00000602251	TRDN	Q13061	729 aa		21.24	■□□□□ 0.99
LTBP4-231	ENST00000602251	PAN2	Q504Q3	1202 aa	Known RBP	21.24	■□□□□ 0.99
LTBP4-231	ENST00000602251	ASCL5	Q7RTU5	278 aa		21.24	■□□□□ 0.99
LTBP4-231	ENST00000602251	ATP8B4	Q8TF62	1192 aa		21.24	■□□□□ 0.99
LTBP4-231	ENST00000602251	DNAJB3	Q8WWF6	145 aa		21.24	■□□□□ 0.99
LTBP4-231	ENST00000602251	ESYT1	Q9BSJ8	1104 aa		21.24	■□□□□ 0.99
LTBP4-231	ENST00000602251	MAD2L2	Q9UI95	211 aa		21.24	■□□□□ 0.99
LTBP4-231	ENST00000602251	CDY2A	Q9Y6F7	541 aa		21.24	■□□□□ 0.99
LTBP4-231	ENST00000602251	PLXNA3	P51805	1871 aa		21.24	■□□□□ 0.99
LTBP4-231	ENST00000602251	PER2	O15055	1255 aa		21.23	■□□□□ 0.99
LTBP4-231	ENST00000602251	CDC45	O75419	566 aa		21.23	■□□□□ 0.99
LTBP4-231	ENST00000602251	PDGFB	P01127	241 aa	Predicted RBP	21.23	■□□□□ 0.99
LTBP4-231	ENST00000602251	CD52	P31358	61 aa		21.23	■□□□□ 0.99
LTBP4-231	ENST00000602251	RBM10	P98175	930 aa	Known RBP	21.23	■□□□□ 0.99
LTBP4-231	ENST00000602251	SP4	Q02446	784 aa		21.23	■□□□□ 0.99
LTBP4-231	ENST00000602251	SLC35G1	Q2M3R5	365 aa		21.23	■□□□□ 0.99
LTBP4-231	ENST00000602251	NPAS4	Q8IUM7	802 aa		21.23	■□□□□ 0.99
LTBP4-231	ENST00000602251	VN1R2	Q8NFZ6	395 aa		21.23	■□□□□ 0.99
LTBP4-231	ENST00000602251	FRMPD4	Q14CM0	1322 aa		21.23	■□□□□ 0.99
LTBP4-231	ENST00000602251	GVINP1	Q7Z2Y8	2422 aa		21.23	■□□□□ 0.99
LTBP4-231	ENST00000602251	DOCK5	Q9H7D0	1870 aa		21.22	■□□□□ 0.99
LTBP4-231	ENST00000602251	MBLAC1	A4D2B0	266 aa	Predicted RBP	21.22	■□□□□ 0.99
LTBP4-231	ENST00000602251	PALM3	A6NDB9	673 aa	Predicted RBP	21.22	■□□□□ 0.99
LTBP4-231	ENST00000602251	GALR2	O43603	387 aa	Predicted RBP	21.22	■□□□□ 0.99
LTBP4-231	ENST00000602251	PPFIA3	O75145	1194 aa		21.22	■□□□□ 0.99
LTBP4-231	ENST00000602251	TRAF1	Q13077	416 aa		21.22	■□□□□ 0.99
LTBP4-231	ENST00000602251	PPFIA1	Q13136	1202 aa		21.22	■□□□□ 0.99
LTBP4-231	ENST00000602251	MARCH8	Q5T0T0	291 aa		21.22	■□□□□ 0.99
LTBP4-231	ENST00000602251	HOMER1	Q86YM7	354 aa		21.22	■□□□□ 0.99
LTBP4-231	ENST00000602251	RIPOR3	Q96MK2	946 aa		21.22	■□□□□ 0.99
LTBP4-231	ENST00000602251	SENP7	Q9BQF6	1050 aa		21.22	■□□□□ 0.99
LTBP4-231	ENST00000602251	FTHL17	Q9BXU8	183 aa		21.22	■□□□□ 0.99
LTBP4-231	ENST00000602251	ANO2	Q9NQ90	1003 aa		21.22	■□□□□ 0.99
LTBP4-231	ENST00000602251	TUBE1	Q9UJT0	475 aa		21.22	■□□□□ 0.99
LTBP4-231	ENST00000602251	ZNF292	O60281	2723 aa		21.22	■□□□□ 0.99
LTBP4-231	ENST00000602251	KIAA1671	Q9BY89	1806 aa		21.22	■□□□□ 0.99
LTBP4-231	ENST00000602251	GRIK4	Q16099	956 aa		21.21	■□□□□ 0.99
LTBP4-231	ENST00000602251	IFIT1B	Q5T764	474 aa	Known RBP	21.21	■□□□□ 0.99
LTBP4-231	ENST00000602251	MICAL1	Q8TDZ2	1067 aa		21.21	■□□□□ 0.99
LTBP4-231	ENST00000602251	MAP4K1	Q92918	833 aa		21.21	■□□□□ 0.99
LTBP4-231	ENST00000602251	PIGS	Q96S52	555 aa		21.21	■□□□□ 0.99
LTBP4-231	ENST00000602251	UBAC1	Q9BSL1	405 aa		21.21	■□□□□ 0.99

Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms