RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 TOP1MTQ969P6 601 aa17.32■□□□□ 0.36
TGFB1-202ENST00000597453 ANO3Q9BYT9 981 aa17.32■□□□□ 0.36
TGFB1-202ENST00000597453 IFIH1Q9BYX4 1025 aaKnown RBP17.32■□□□□ 0.36
TGFB1-202ENST00000597453 SMARCAD1Q9H4L7 1026 aa17.32■□□□□ 0.36
TGFB1-202ENST00000597453 BARHL2Q9NY43 387 aa17.32■□□□□ 0.36
TGFB1-202ENST00000597453 TUBE1Q9UJT0 475 aa17.32■□□□□ 0.36
TGFB1-202ENST00000597453 COL4A6Q14031 1691 aa17.32■□□□□ 0.36
TGFB1-202ENST00000597453 MBLAC1A4D2B0 266 aaPredicted RBP17.31■□□□□ 0.36
TGFB1-202ENST00000597453 SMCO2A6NFE2 343 aa17.31■□□□□ 0.36
TGFB1-202ENST00000597453 UPP2O95045 317 aa17.31■□□□□ 0.36
TGFB1-202ENST00000597453 GHRP10912 638 aa17.31■□□□□ 0.36
TGFB1-202ENST00000597453 CLK2P49760 499 aaKnown RBP17.31■□□□□ 0.36
TGFB1-202ENST00000597453 IGBP1P78318 339 aa17.31■□□□□ 0.36
TGFB1-202ENST00000597453 ITGB3BPQ13352 177 aaPredicted RBP17.31■□□□□ 0.36
TGFB1-202ENST00000597453 TAF2Q6P1X5 1199 aa17.31■□□□□ 0.36
TGFB1-202ENST00000597453 LMCD1Q9NZU5 365 aa17.31■□□□□ 0.36
TGFB1-202ENST00000597453 SLC9A2Q9UBY0 812 aa17.31■□□□□ 0.36
TGFB1-202ENST00000597453 NAP1L2Q9ULW6 460 aaPredicted RBP17.31■□□□□ 0.36
TGFB1-202ENST00000597453 COG5Q9UP83 839 aa17.31■□□□□ 0.36
TGFB1-202ENST00000597453 RALGAPA2Q2PPJ7 1873 aa17.31■□□□□ 0.36
TGFB1-202ENST00000597453 NFASCO94856 1347 aa17.3■□□□□ 0.36
TGFB1-202ENST00000597453 ATG2AQ2TAZ0 1938 aa17.3■□□□□ 0.36
TGFB1-202ENST00000597453 hCG_1984214I3L0E3 225 aa17.3■□□□□ 0.36
TGFB1-202ENST00000597453 ADAMTS3O15072 1205 aa17.3■□□□□ 0.36
TGFB1-202ENST00000597453 FOSP01100 380 aaPredicted RBP17.3■□□□□ 0.36
TGFB1-202ENST00000597453 ADD1P35611 737 aaKnown RBP17.3■□□□□ 0.36
TGFB1-202ENST00000597453 RCAN1P53805 252 aa17.3■□□□□ 0.36
TGFB1-202ENST00000597453 ACTR2P61160 394 aa17.3■□□□□ 0.36
TGFB1-202ENST00000597453 APOBRQ0VD83 1088 aa17.3■□□□□ 0.36
TGFB1-202ENST00000597453 LPIN1Q14693 890 aa17.3■□□□□ 0.36
TGFB1-202ENST00000597453 AAK1Q2M2I8 961 aa17.3■□□□□ 0.36
TGFB1-202ENST00000597453 CEP55Q53EZ4 464 aa17.3■□□□□ 0.36
TGFB1-202ENST00000597453 ZNF713Q8N859 430 aaPredicted RBP17.3■□□□□ 0.36
TGFB1-202ENST00000597453 FBXO22Q8NEZ5 403 aa17.3■□□□□ 0.36
TGFB1-202ENST00000597453 DNAJB3Q8WWF6 145 aa17.3■□□□□ 0.36
TGFB1-202ENST00000597453 APBB2Q92870 758 aa17.3■□□□□ 0.36
TGFB1-202ENST00000597453 YME1L1Q96TA2 773 aa17.3■□□□□ 0.36
TGFB1-202ENST00000597453 AGO4Q9HCK5 861 aaKnown RBP17.3■□□□□ 0.36
TGFB1-202ENST00000597453 MEIS1O00470 390 aa17.29■□□□□ 0.36
TGFB1-202ENST00000597453 HMGB1P09429 215 aaKnown RBP17.29■□□□□ 0.36
TGFB1-202ENST00000597453 INSRRP14616 1297 aa17.29■□□□□ 0.36
TGFB1-202ENST00000597453 SREBF1P36956 1147 aa17.29■□□□□ 0.36
TGFB1-202ENST00000597453 METAP2P50579 478 aaKnown RBP eCLIP17.29■□□□□ 0.366e-7■□□□□ 10.9
TGFB1-202ENST00000597453 AP3B2Q13367 1082 aa17.29■□□□□ 0.36
TGFB1-202ENST00000597453 Q6ZUG5 572 aa17.29■□□□□ 0.36
TGFB1-202ENST00000597453 TEX2Q8IWB9 1127 aa17.29■□□□□ 0.36
TGFB1-202ENST00000597453 HLA-CQ95604 372 aa17.29■□□□□ 0.36
TGFB1-202ENST00000597453 JAKMIP1Q96N16 626 aaKnown RBP17.29■□□□□ 0.36
TGFB1-202ENST00000597453 SDF4Q9BRK5 362 aa17.29■□□□□ 0.36
TGFB1-202ENST00000597453 SNX14Q9Y5W7 946 aa17.29■□□□□ 0.36
TGFB1-202ENST00000597453 CDY2AQ9Y6F7 541 aa17.29■□□□□ 0.36
TGFB1-202ENST00000597453 TTC3P53804 2025 aa17.28■□□□□ 0.36
TGFB1-202ENST00000597453 MYO7AQ13402 2215 aa17.28■□□□□ 0.36
TGFB1-202ENST00000597453 FGD1P98174 961 aa17.28■□□□□ 0.36
TGFB1-202ENST00000597453 PLCB4Q15147 1175 aa17.28■□□□□ 0.36
TGFB1-202ENST00000597453 PFKFB3Q16875 520 aaPredicted RBP17.28■□□□□ 0.36
TGFB1-202ENST00000597453 EPC2Q52LR7 807 aa17.28■□□□□ 0.36
TGFB1-202ENST00000597453 FBXO47Q5MNV8 452 aa17.28■□□□□ 0.36
TGFB1-202ENST00000597453 JAKMIP3Q5VZ66 844 aa17.28■□□□□ 0.36
TGFB1-202ENST00000597453 RSPH3Q86UC2 560 aa17.28■□□□□ 0.36
TGFB1-202ENST00000597453 TRAPPC12Q8WVT3 735 aa17.28■□□□□ 0.36
TGFB1-202ENST00000597453 BRF1Q92994 677 aa17.28■□□□□ 0.36
TGFB1-202ENST00000597453 FAM49AQ9H0Q0 323 aaPredicted RBP17.28■□□□□ 0.36
TGFB1-202ENST00000597453 AZI2Q9H6S1 392 aa17.28■□□□□ 0.36
TGFB1-202ENST00000597453 TRPC6Q9Y210 931 aa17.28■□□□□ 0.36
TGFB1-202ENST00000597453 NID2Q14112 1375 aa17.28■□□□□ 0.36
TGFB1-202ENST00000597453 RRN3P2A6NIE6 340 aa17.27■□□□□ 0.36
TGFB1-202ENST00000597453 FAM86B1E9PN63 330 aa17.27■□□□□ 0.36
TGFB1-202ENST00000597453 DDX39AO00148 427 aaKnown RBP17.27■□□□□ 0.36
TGFB1-202ENST00000597453 CCNE2O96020 404 aa17.27■□□□□ 0.36
TGFB1-202ENST00000597453 FAM86B2P0C5J1 330 aa17.27■□□□□ 0.36
TGFB1-202ENST00000597453 SCG2P13521 617 aa17.27■□□□□ 0.36
TGFB1-202ENST00000597453 MRPS6P82932 125 aaKnown RBP17.27■□□□□ 0.36
TGFB1-202ENST00000597453 CRYGNQ8WXF5 182 aa17.27■□□□□ 0.36
TGFB1-202ENST00000597453 AGO3Q9H9G7 860 aaKnown RBP17.27■□□□□ 0.36
TGFB1-202ENST00000597453 WDR81Q562E7 1941 aa17.26■□□□□ 0.35
TGFB1-202ENST00000597453 IGLV3-22A0A075B6J6 115 aa17.26■□□□□ 0.35
TGFB1-202ENST00000597453 EIF5BO60841 1220 aaKnown RBP17.26■□□□□ 0.35
TGFB1-202ENST00000597453 ATG7O95352 703 aa17.26■□□□□ 0.35
TGFB1-202ENST00000597453 ZNF76P36508 570 aa17.26■□□□□ 0.35
TGFB1-202ENST00000597453 STAT5BP51692 787 aa17.26■□□□□ 0.35
TGFB1-202ENST00000597453 TMEM62Q0P6H9 643 aa17.26■□□□□ 0.35
TGFB1-202ENST00000597453 PKN1Q16512 942 aa17.26■□□□□ 0.35
TGFB1-202ENST00000597453 BLOC1S2Q6QNY1 142 aa17.26■□□□□ 0.35
TGFB1-202ENST00000597453 TSHZ1Q6ZSZ6 1077 aa17.26■□□□□ 0.35
TGFB1-202ENST00000597453 PLPPR4Q7Z2D5 763 aa17.26■□□□□ 0.35
TGFB1-202ENST00000597453 SAMD11Q96NU1 681 aa17.26■□□□□ 0.35
TGFB1-202ENST00000597453 UIMC1Q96RL1 719 aa17.26■□□□□ 0.35
TGFB1-202ENST00000597453 GLT8D2Q9H1C3 349 aa17.26■□□□□ 0.35
TGFB1-202ENST00000597453 EVPLQ92817 2033 aa17.26■□□□□ 0.35
TGFB1-202ENST00000597453 KIAA1671Q9BY89 1806 aa17.26■□□□□ 0.35
TGFB1-202ENST00000597453 MYH9P35579 1960 aaKnown RBP17.26■□□□□ 0.35
TGFB1-202ENST00000597453 IGKV6D-21A0A0A0MT36 114 aa17.25■□□□□ 0.35
TGFB1-202ENST00000597453 CCDC196A0A1B0GTZ2 297 aa17.25■□□□□ 0.35
TGFB1-202ENST00000597453 ESYT2A0FGR8 921 aa17.25■□□□□ 0.35
TGFB1-202ENST00000597453 ENPP3O14638 875 aa17.25■□□□□ 0.35
TGFB1-202ENST00000597453 PPFIA3O75145 1194 aa17.25■□□□□ 0.35
TGFB1-202ENST00000597453 RPS6KB1P23443 525 aa17.25■□□□□ 0.35
TGFB1-202ENST00000597453 CD52P31358 61 aa17.25■□□□□ 0.35
TGFB1-202ENST00000597453 NIPA1Q7RTP0 329 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms