RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 ZNF174Q15697 407 aa22.18■■□□□ 1.14
SHKBP1-214ENST00000597396 GDF6Q6KF10 455 aaPredicted RBP22.18■■□□□ 1.14
SHKBP1-214ENST00000597396 MIER3Q7Z3K6 550 aa22.18■■□□□ 1.14
SHKBP1-214ENST00000597396 ZNF302Q9NR11 478 aa22.18■■□□□ 1.14
SHKBP1-214ENST00000597396 DISC1Q9NRI5 854 aa22.18■■□□□ 1.14
SHKBP1-214ENST00000597396 SYT1P21579 422 aa22.17■■□□□ 1.14
SHKBP1-214ENST00000597396 ORC2Q13416 577 aaPredicted RBP22.17■■□□□ 1.14
SHKBP1-214ENST00000597396 PTGISQ16647 500 aa22.17■■□□□ 1.14
SHKBP1-214ENST00000597396 SWSAP1Q6NVH7 229 aa22.17■■□□□ 1.14
SHKBP1-214ENST00000597396 PLPPR4Q7Z2D5 763 aa22.17■■□□□ 1.14
SHKBP1-214ENST00000597396 CCDC60Q8IWA6 550 aaPredicted RBP22.17■■□□□ 1.14
SHKBP1-214ENST00000597396 HAS1Q92839 578 aa22.17■■□□□ 1.14
SHKBP1-214ENST00000597396 IGKV6D-21A0A0A0MT36 114 aa22.16■■□□□ 1.14
SHKBP1-214ENST00000597396 C17orf102A2RUQ5 167 aa22.16■■□□□ 1.14
SHKBP1-214ENST00000597396 TRIM43BA6NCK2 446 aa22.16■■□□□ 1.14
SHKBP1-214ENST00000597396 KIAA0355O15063 1070 aa22.16■■□□□ 1.14
SHKBP1-214ENST00000597396 RAG1P15918 1043 aa22.16■■□□□ 1.14
SHKBP1-214ENST00000597396 PDXDC2PQ6P474 469 aa22.16■■□□□ 1.14
SHKBP1-214ENST00000597396 SPRYD3Q8NCJ5 442 aa22.16■■□□□ 1.14
SHKBP1-214ENST00000597396 RDM1Q8NG50 284 aa22.16■■□□□ 1.14
SHKBP1-214ENST00000597396 TNPO1Q92973 898 aaKnown RBP22.16■■□□□ 1.14
SHKBP1-214ENST00000597396 TRIM43Q96BQ3 446 aaPredicted RBP22.16■■□□□ 1.14
SHKBP1-214ENST00000597396 LBHD1Q9BQE6 289 aaPredicted RBP22.16■■□□□ 1.14
SHKBP1-214ENST00000597396 RNPEPQ9H4A4 650 aa22.16■■□□□ 1.14
SHKBP1-214ENST00000597396 TBX21Q9UL17 535 aa22.16■■□□□ 1.14
SHKBP1-214ENST00000597396 TRPC6Q9Y210 931 aa22.16■■□□□ 1.14
SHKBP1-214ENST00000597396 EVPLQ92817 2033 aa22.15■■□□□ 1.14
SHKBP1-214ENST00000597396 GNAT1P11488 350 aa22.15■■□□□ 1.14
SHKBP1-214ENST00000597396 CYP2C9P11712 490 aa22.15■■□□□ 1.14
SHKBP1-214ENST00000597396 SLC26A2P50443 739 aa22.15■■□□□ 1.14
SHKBP1-214ENST00000597396 PPFIA1Q13136 1202 aa22.15■■□□□ 1.14
SHKBP1-214ENST00000597396 PPP2R5CQ13362 524 aa22.15■■□□□ 1.14
SHKBP1-214ENST00000597396 BECN1Q14457 450 aa22.15■■□□□ 1.14
SHKBP1-214ENST00000597396 NBR1Q14596 966 aa22.15■■□□□ 1.14
SHKBP1-214ENST00000597396 RILPL1Q5EBL4 403 aa22.15■■□□□ 1.14
SHKBP1-214ENST00000597396 AFAP1L1Q8TED9 768 aa22.15■■□□□ 1.14
SHKBP1-214ENST00000597396 PPP1R12CQ9BZL4 782 aa22.15■■□□□ 1.14
SHKBP1-214ENST00000597396 TMEM60Q9H2L4 133 aa22.15■■□□□ 1.14
SHKBP1-214ENST00000597396 GABBR1Q9UBS5 961 aa22.15■■□□□ 1.14
SHKBP1-214ENST00000597396 MYH15Q9Y2K3 1946 aa22.15■■□□□ 1.14
SHKBP1-214ENST00000597396 TANC1Q9C0D5 1861 aa22.14■■□□□ 1.13
SHKBP1-214ENST00000597396 TXKP42681 527 aa22.14■■□□□ 1.13
SHKBP1-214ENST00000597396 PLCB4Q15147 1175 aa22.14■■□□□ 1.13
SHKBP1-214ENST00000597396 B3GNT9Q6UX72 402 aa22.14■■□□□ 1.13
SHKBP1-214ENST00000597396 BRAPQ7Z569 592 aa22.14■■□□□ 1.13
SHKBP1-214ENST00000597396 FERMT3Q86UX7 667 aa22.14■■□□□ 1.13
SHKBP1-214ENST00000597396 CKAP2LQ8IYA6 745 aa22.14■■□□□ 1.13
SHKBP1-214ENST00000597396 ATP6V0A1Q93050 837 aa22.14■■□□□ 1.13
SHKBP1-214ENST00000597396 GDF15Q99988 308 aa22.14■■□□□ 1.13
SHKBP1-214ENST00000597396 HIPK3Q9H422 1215 aa22.14■■□□□ 1.13
SHKBP1-214ENST00000597396 SETD4Q9NVD3 440 aa22.14■■□□□ 1.13
SHKBP1-214ENST00000597396 VAV3Q9UKW4 847 aa22.14■■□□□ 1.13
SHKBP1-214ENST00000597396 PCDHA12Q9UN75 941 aa22.14■■□□□ 1.13
SHKBP1-214ENST00000597396 NRCAMQ92823 1304 aa22.13■■□□□ 1.13
SHKBP1-214ENST00000597396 SZT2Q5T011 3432 aa22.13■■□□□ 1.13
SHKBP1-214ENST00000597396 POTEB3A0JP26 581 aa22.13■■□□□ 1.13
SHKBP1-214ENST00000597396 STX6O43752 255 aa22.13■■□□□ 1.13
SHKBP1-214ENST00000597396 OR52Z1P0C646 297 aa22.13■■□□□ 1.13
SHKBP1-214ENST00000597396 TOB1P50616 345 aaPredicted RBP22.13■■□□□ 1.13
SHKBP1-214ENST00000597396 ZNF200P98182 395 aaPredicted RBP22.13■■□□□ 1.13
SHKBP1-214ENST00000597396 MDM2Q00987 491 aaPredicted RBP22.13■■□□□ 1.13
SHKBP1-214ENST00000597396 NCAPH2Q6IBW4 605 aa22.13■■□□□ 1.13
SHKBP1-214ENST00000597396 POTEBQ6S5H4 581 aa22.13■■□□□ 1.13
SHKBP1-214ENST00000597396 CCDC155Q8N6L0 562 aa22.13■■□□□ 1.13
SHKBP1-214ENST00000597396 TTC12Q9H892 705 aaPredicted RBP22.13■■□□□ 1.13
SHKBP1-214ENST00000597396 PCDHB6Q9Y5E3 794 aa22.13■■□□□ 1.13
SHKBP1-214ENST00000597396 MAFBQ9Y5Q3 323 aaPredicted RBP22.13■■□□□ 1.13
SHKBP1-214ENST00000597396 IGSF9BQ9UPX0 1349 aa22.12■■□□□ 1.13
SHKBP1-214ENST00000597396 SOX1O00570 391 aaPredicted RBP22.12■■□□□ 1.13
SHKBP1-214ENST00000597396 TIMP1P01033 207 aa22.12■■□□□ 1.13
SHKBP1-214ENST00000597396 BMP8BP34820 402 aa22.12■■□□□ 1.13
SHKBP1-214ENST00000597396 GRIK4Q16099 956 aa22.12■■□□□ 1.13
SHKBP1-214ENST00000597396 ATP8B4Q8TF62 1192 aa22.12■■□□□ 1.13
SHKBP1-214ENST00000597396 LMBR1Q8WVP7 490 aa22.12■■□□□ 1.13
SHKBP1-214ENST00000597396 MTMR9Q96QG7 549 aa22.12■■□□□ 1.13
SHKBP1-214ENST00000597396 NOC4LQ9BVI4 516 aaKnown RBP22.12■■□□□ 1.13
SHKBP1-214ENST00000597396 SCN5AQ14524 2016 aa22.11■■□□□ 1.13
SHKBP1-214ENST00000597396 RRN3P2A6NIE6 340 aa22.11■■□□□ 1.13
SHKBP1-214ENST00000597396 EML1O00423 815 aa22.11■■□□□ 1.13
SHKBP1-214ENST00000597396 HBP1O60381 514 aa22.11■■□□□ 1.13
SHKBP1-214ENST00000597396 INSRRP14616 1297 aa22.11■■□□□ 1.13
SHKBP1-214ENST00000597396 HOXC8P31273 242 aa22.11■■□□□ 1.13
SHKBP1-214ENST00000597396 MAGEA10P43363 369 aaPredicted RBP22.11■■□□□ 1.13
SHKBP1-214ENST00000597396 IGBP1P78318 339 aa22.11■■□□□ 1.13
SHKBP1-214ENST00000597396 PTK7Q13308 1070 aa22.11■■□□□ 1.13
SHKBP1-214ENST00000597396 BFSP2Q13515 415 aa22.11■■□□□ 1.13
SHKBP1-214ENST00000597396 HIC1Q14526 733 aa22.11■■□□□ 1.13
SHKBP1-214ENST00000597396 TRMT1LQ7Z2T5 733 aaKnown RBP22.11■■□□□ 1.13
SHKBP1-214ENST00000597396 BADQ92934 168 aa22.11■■□□□ 1.13
SHKBP1-214ENST00000597396 FAM167AQ96KS9 214 aa22.11■■□□□ 1.13
SHKBP1-214ENST00000597396 MTMR6Q9Y217 621 aa22.11■■□□□ 1.13
SHKBP1-214ENST00000597396 TREHO43280 583 aa22.1■■□□□ 1.13
SHKBP1-214ENST00000597396 ITGB8P26012 769 aa22.1■■□□□ 1.13
SHKBP1-214ENST00000597396 CYP2C18P33260 490 aa22.1■■□□□ 1.13
SHKBP1-214ENST00000597396 EPHA7Q15375 998 aa22.1■■□□□ 1.13
SHKBP1-214ENST00000597396 UGCGQ16739 394 aa22.1■■□□□ 1.13
SHKBP1-214ENST00000597396 RETREG2Q8NC44 543 aa22.1■■□□□ 1.13
SHKBP1-214ENST00000597396 BANK1Q8NDB2 785 aa22.1■■□□□ 1.13
SHKBP1-214ENST00000597396 BBXQ8WY36 941 aaPredicted RBP22.1■■□□□ 1.13
SHKBP1-214ENST00000597396 LRCH3Q96II8 777 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms