RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 GRIK4Q16099 956 aa11.96□□□□□ -0.49
CCDC9-203ENST00000596938 TCTN1Q2MV58 587 aa11.96□□□□□ -0.49
CCDC9-203ENST00000596938 PLEKHG4Q58EX7 1191 aa11.96□□□□□ -0.49
CCDC9-203ENST00000596938 MARCH8Q5T0T0 291 aa11.96□□□□□ -0.49
CCDC9-203ENST00000596938 ABHD15Q6UXT9 468 aa11.96□□□□□ -0.49
CCDC9-203ENST00000596938 DBF4BQ8NFT6 615 aa11.96□□□□□ -0.49
CCDC9-203ENST00000596938 C22orf23Q9BZE7 217 aa11.96□□□□□ -0.49
CCDC9-203ENST00000596938 SLKQ9H2G2 1235 aaPredicted RBP11.96□□□□□ -0.49
CCDC9-203ENST00000596938 PCDHA4Q9UN74 947 aa11.96□□□□□ -0.49
CCDC9-203ENST00000596938 CHD7Q9P2D1 2997 aa11.96□□□□□ -0.5
CCDC9-203ENST00000596938 UNC80Q8N2C7 3258 aa11.95□□□□□ -0.5
CCDC9-203ENST00000596938 EDIL3O43854 480 aa11.95□□□□□ -0.5
CCDC9-203ENST00000596938 PFKFB2O60825 505 aa11.95□□□□□ -0.5
CCDC9-203ENST00000596938 CDKL5O76039 1030 aa11.95□□□□□ -0.5
CCDC9-203ENST00000596938 CCNE2O96020 404 aa11.95□□□□□ -0.5
CCDC9-203ENST00000596938 INSRRP14616 1297 aa11.95□□□□□ -0.5
CCDC9-203ENST00000596938 SCRN1Q12765 414 aa11.95□□□□□ -0.5
CCDC9-203ENST00000596938 STK3Q13188 491 aa11.95□□□□□ -0.5
CCDC9-203ENST00000596938 MKRN4PQ13434 485 aaPredicted RBP11.95□□□□□ -0.5
CCDC9-203ENST00000596938 PLCB4Q15147 1175 aa11.95□□□□□ -0.5
CCDC9-203ENST00000596938 RSPH3Q86UC2 560 aa11.95□□□□□ -0.5
CCDC9-203ENST00000596938 MAFAQ8NHW3 353 aaPredicted RBP11.95□□□□□ -0.5
CCDC9-203ENST00000596938 RASGRP4Q8TDF6 673 aa11.95□□□□□ -0.5
CCDC9-203ENST00000596938 SEPT8Q92599 483 aa11.95□□□□□ -0.5
CCDC9-203ENST00000596938 ZNF577Q9BSK1 485 aa11.95□□□□□ -0.5
CCDC9-203ENST00000596938 PRDM12Q9H4Q4 367 aa11.95□□□□□ -0.5
CCDC9-203ENST00000596938 TUBE1Q9UJT0 475 aa11.95□□□□□ -0.5
CCDC9-203ENST00000596938 TPCN1Q9ULQ1 816 aa11.95□□□□□ -0.5
CCDC9-203ENST00000596938 PRUNE2Q8WUY3 3088 aa11.94□□□□□ -0.5
CCDC9-203ENST00000596938 CYP3A7-CYP3A51PA0A087WV96 503 aa11.94□□□□□ -0.5
CCDC9-203ENST00000596938 POTEB3A0JP26 581 aa11.94□□□□□ -0.5
CCDC9-203ENST00000596938 M0R2N6 131 aa11.94□□□□□ -0.5
CCDC9-203ENST00000596938 CHRNA1P02708 482 aa11.94□□□□□ -0.5
CCDC9-203ENST00000596938 CYP3A7P24462 503 aa11.94□□□□□ -0.5
CCDC9-203ENST00000596938 PRR16Q569H4 304 aa11.94□□□□□ -0.5
CCDC9-203ENST00000596938 FAM160B1Q5W0V3 765 aa11.94□□□□□ -0.5
CCDC9-203ENST00000596938 PPP2R2DQ66LE6 453 aa11.94□□□□□ -0.5
CCDC9-203ENST00000596938 ZNF746Q6NUN9 644 aaPredicted RBP11.94□□□□□ -0.5
CCDC9-203ENST00000596938 MIS18BP1Q6P0N0 1132 aa11.94□□□□□ -0.5
CCDC9-203ENST00000596938 POTEBQ6S5H4 581 aa11.94□□□□□ -0.5
CCDC9-203ENST00000596938 RUFY4Q6ZNE9 571 aa11.94□□□□□ -0.5
CCDC9-203ENST00000596938 SMAP1Q8IYB5 467 aaPredicted RBP11.94□□□□□ -0.5
CCDC9-203ENST00000596938 BLIDQ8IZY5 108 aa11.94□□□□□ -0.5
CCDC9-203ENST00000596938 DAGLBQ8NCG7 672 aa11.94□□□□□ -0.5
CCDC9-203ENST00000596938 GAS2L1Q99501 681 aaPredicted RBP11.94□□□□□ -0.5
CCDC9-203ENST00000596938 RAD9AQ99638 391 aa11.94□□□□□ -0.5
CCDC9-203ENST00000596938 TLL1O43897 1013 aa11.93□□□□□ -0.5
CCDC9-203ENST00000596938 HBP1O60381 514 aa11.93□□□□□ -0.5
CCDC9-203ENST00000596938 GJB5O95377 273 aa11.93□□□□□ -0.5
CCDC9-203ENST00000596938 SEC24BO95487 1268 aa11.93□□□□□ -0.5
CCDC9-203ENST00000596938 CA3P07451 260 aa11.93□□□□□ -0.5
CCDC9-203ENST00000596938 CTSHP09668 335 aa11.93□□□□□ -0.5
CCDC9-203ENST00000596938 AK2P54819 239 aa11.93□□□□□ -0.5
CCDC9-203ENST00000596938 DEFB103AP81534 67 aa11.93□□□□□ -0.5
CCDC9-203ENST00000596938 KRT76Q01546 638 aa11.93□□□□□ -0.5
CCDC9-203ENST00000596938 MGAT3Q09327 533 aa11.93□□□□□ -0.5
CCDC9-203ENST00000596938 NPY5RQ15761 445 aa11.93□□□□□ -0.5
CCDC9-203ENST00000596938 SWSAP1Q6NVH7 229 aa11.93□□□□□ -0.5
CCDC9-203ENST00000596938 NME8Q8N427 588 aa11.93□□□□□ -0.5
CCDC9-203ENST00000596938 TBCKQ8TEA7 893 aa11.93□□□□□ -0.5
CCDC9-203ENST00000596938 DNAJB3Q8WWF6 145 aa11.93□□□□□ -0.5
CCDC9-203ENST00000596938 APBB2Q92870 758 aa11.93□□□□□ -0.5
CCDC9-203ENST00000596938 LENG9Q96B70 501 aa11.93□□□□□ -0.5
CCDC9-203ENST00000596938 RIT2Q99578 217 aa11.93□□□□□ -0.5
CCDC9-203ENST00000596938 ZBED2Q9BTP6 218 aa11.93□□□□□ -0.5
CCDC9-203ENST00000596938 OSBPL7Q9BZF2 842 aa11.93□□□□□ -0.5
CCDC9-203ENST00000596938 TRPC6Q9Y210 931 aa11.93□□□□□ -0.5
CCDC9-203ENST00000596938 PCDHA2Q9Y5H9 948 aa11.93□□□□□ -0.5
CCDC9-203ENST00000596938 MAFBQ9Y5Q3 323 aaPredicted RBP11.93□□□□□ -0.5
CCDC9-203ENST00000596938 SQORQ9Y6N5 450 aa11.93□□□□□ -0.5
CCDC9-203ENST00000596938 STK36Q9NRP7 1315 aa11.92□□□□□ -0.5
CCDC9-203ENST00000596938 MYH7BA7E2Y1 1941 aa11.92□□□□□ -0.5
CCDC9-203ENST00000596938 SMIM35A0A1B0GVV1 85 aa11.92□□□□□ -0.5
CCDC9-203ENST00000596938 DDX39AO00148 427 aaKnown RBP11.92□□□□□ -0.5
CCDC9-203ENST00000596938 BACH1O14867 736 aa11.92□□□□□ -0.5
CCDC9-203ENST00000596938 MSH4O15457 936 aa11.92□□□□□ -0.5
CCDC9-203ENST00000596938 AMHP03971 560 aa11.92□□□□□ -0.5
CCDC9-203ENST00000596938 PSAPP07602 524 aa11.92□□□□□ -0.5
CCDC9-203ENST00000596938 XBP1P17861 261 aa11.92□□□□□ -0.5
CCDC9-203ENST00000596938 POU3F3P20264 500 aaPredicted RBP11.92□□□□□ -0.5
CCDC9-203ENST00000596938 NEK4P51957 841 aa11.92□□□□□ -0.5
CCDC9-203ENST00000596938 IGBP1P78318 339 aa11.92□□□□□ -0.5
CCDC9-203ENST00000596938 TAP1Q03518 808 aa11.92□□□□□ -0.5
CCDC9-203ENST00000596938 ADGRE1Q14246 886 aa11.92□□□□□ -0.5
CCDC9-203ENST00000596938 Q4G0T1 1027 aa11.92□□□□□ -0.5
CCDC9-203ENST00000596938 ZNF484Q5JVG2 852 aa11.92□□□□□ -0.5
CCDC9-203ENST00000596938 IER5Q5VY09 327 aa11.92□□□□□ -0.5
CCDC9-203ENST00000596938 PDXDC2PQ6P474 469 aa11.92□□□□□ -0.5
CCDC9-203ENST00000596938 MOXD1Q6UVY6 613 aa11.92□□□□□ -0.5
CCDC9-203ENST00000596938 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.92□□□□□ -0.5
CCDC9-203ENST00000596938 FAM43BQ6ZT52 329 aaPredicted RBP11.92□□□□□ -0.5
CCDC9-203ENST00000596938 CCDC60Q8IWA6 550 aaPredicted RBP11.92□□□□□ -0.5
CCDC9-203ENST00000596938 ATP8B4Q8TF62 1192 aa11.92□□□□□ -0.5
CCDC9-203ENST00000596938 AIFM3Q96NN9 605 aa11.92□□□□□ -0.5
CCDC9-203ENST00000596938 PHF20Q9BVI0 1012 aa11.92□□□□□ -0.5
CCDC9-203ENST00000596938 ZNF302Q9NR11 478 aa11.92□□□□□ -0.5
CCDC9-203ENST00000596938 INSL6Q9Y581 213 aa11.92□□□□□ -0.5
CCDC9-203ENST00000596938 PCDHA10Q9Y5I2 948 aa11.92□□□□□ -0.5
CCDC9-203ENST00000596938 CTDNEP1O95476 244 aa11.91□□□□□ -0.5
CCDC9-203ENST00000596938 ATP4AP20648 1035 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms