RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 PPP2R3CQ969Q6 453 aa20.01■□□□□ 0.79
RETREG3-210ENST00000590541 KIAA1671Q9BY89 1806 aa20.01■□□□□ 0.79
RETREG3-210ENST00000590541 CYTH3O43739 400 aa20■□□□□ 0.79
RETREG3-210ENST00000590541 TRAF1Q13077 416 aa20■□□□□ 0.79
RETREG3-210ENST00000590541 IMMTQ16891 758 aaKnown RBP20■□□□□ 0.79
RETREG3-210ENST00000590541 NAALADL2Q58DX5 795 aa20■□□□□ 0.79
RETREG3-210ENST00000590541 RTN4RL1Q86UN2 441 aaPredicted RBP20■□□□□ 0.79
RETREG3-210ENST00000590541 CMTR2Q8IYT2 770 aaKnown RBP20■□□□□ 0.79
RETREG3-210ENST00000590541 KLHL23Q8NBE8 558 aa20■□□□□ 0.79
RETREG3-210ENST00000590541 SENP7Q9BQF6 1050 aa20■□□□□ 0.79
RETREG3-210ENST00000590541 DSCC1Q9BVC3 393 aa20■□□□□ 0.79
RETREG3-210ENST00000590541 AGO3Q9H9G7 860 aaKnown RBP20■□□□□ 0.79
RETREG3-210ENST00000590541 BARX2Q9UMQ3 279 aaPredicted RBP20■□□□□ 0.79
RETREG3-210ENST00000590541 USP15Q9Y4E8 981 aaPredicted RBP20■□□□□ 0.79
RETREG3-210ENST00000590541 NRIP1P48552 1158 aa19.99■□□□□ 0.79
RETREG3-210ENST00000590541 TSHZ1Q6ZSZ6 1077 aa19.99■□□□□ 0.79
RETREG3-210ENST00000590541 CYB5R4Q7L1T6 521 aa19.99■□□□□ 0.79
RETREG3-210ENST00000590541 RBM23Q86U06 439 aaKnown RBP19.99■□□□□ 0.79
RETREG3-210ENST00000590541 POF1BQ8WVV4 589 aa19.99■□□□□ 0.79
RETREG3-210ENST00000590541 DNAJB3Q8WWF6 145 aa19.99■□□□□ 0.79
RETREG3-210ENST00000590541 CNNM2Q9H8M5 875 aa19.99■□□□□ 0.79
RETREG3-210ENST00000590541 FAM86C1Q9NVL1 165 aa19.99■□□□□ 0.79
RETREG3-210ENST00000590541 PCDHGC5Q9Y5F6 944 aa19.99■□□□□ 0.79
RETREG3-210ENST00000590541 CDY2AQ9Y6F7 541 aa19.99■□□□□ 0.79
RETREG3-210ENST00000590541 PNMA6FA0A0J9YX94 578 aa19.98■□□□□ 0.79
RETREG3-210ENST00000590541 MBLAC1A4D2B0 266 aaPredicted RBP19.98■□□□□ 0.79
RETREG3-210ENST00000590541 CD52P31358 61 aa19.98■□□□□ 0.79
RETREG3-210ENST00000590541 TCF7P36402 384 aaPredicted RBP19.98■□□□□ 0.79
RETREG3-210ENST00000590541 VCPP55072 806 aaKnown RBP19.98■□□□□ 0.79
RETREG3-210ENST00000590541 SIGLEC14Q08ET2 396 aa19.98■□□□□ 0.79
RETREG3-210ENST00000590541 PPFIA1Q13136 1202 aa19.98■□□□□ 0.79
RETREG3-210ENST00000590541 GRM4Q14833 912 aa19.98■□□□□ 0.79
RETREG3-210ENST00000590541 GRIK4Q16099 956 aa19.98■□□□□ 0.79
RETREG3-210ENST00000590541 MARCH8Q5T0T0 291 aa19.98■□□□□ 0.79
RETREG3-210ENST00000590541 RSPH3Q86UC2 560 aa19.98■□□□□ 0.79
RETREG3-210ENST00000590541 ASIC4Q96FT7 647 aa19.98■□□□□ 0.79
RETREG3-210ENST00000590541 PHF7Q9BWX1 381 aaPredicted RBP19.98■□□□□ 0.79
RETREG3-210ENST00000590541 TUBE1Q9UJT0 475 aa19.98■□□□□ 0.79
RETREG3-210ENST00000590541 KAT6AQ92794 2004 aa19.97■□□□□ 0.79
RETREG3-210ENST00000590541 GFRA3O60609 400 aa19.97■□□□□ 0.79
RETREG3-210ENST00000590541 PCNX4Q63HM2 1172 aa19.97■□□□□ 0.79
RETREG3-210ENST00000590541 NPAS4Q8IUM7 802 aa19.97■□□□□ 0.79
RETREG3-210ENST00000590541 MARK3P27448 753 aa19.96■□□□□ 0.79
RETREG3-210ENST00000590541 MRPS6P82932 125 aaKnown RBP19.96■□□□□ 0.79
RETREG3-210ENST00000590541 PAN2Q504Q3 1202 aaKnown RBP19.96■□□□□ 0.79
RETREG3-210ENST00000590541 TTC22Q5TAA0 569 aa19.96■□□□□ 0.79
RETREG3-210ENST00000590541 ZBTB10Q96DT7 871 aa19.96■□□□□ 0.79
RETREG3-210ENST00000590541 RPGRIP1Q96KN7 1286 aa19.96■□□□□ 0.79
RETREG3-210ENST00000590541 BAZ2BQ9UIF8 2168 aaKnown RBP19.95■□□□□ 0.78
RETREG3-210ENST00000590541 GSTTP1A0A1W2PQM5 241 aa19.95■□□□□ 0.78
RETREG3-210ENST00000590541 ATP9AO75110 1047 aa19.95■□□□□ 0.78
RETREG3-210ENST00000590541 AVPR2P30518 371 aa19.95■□□□□ 0.78
RETREG3-210ENST00000590541 RBM10P98175 930 aaKnown RBP19.95■□□□□ 0.78
RETREG3-210ENST00000590541 RUFY2Q8WXA3 655 aa19.95■□□□□ 0.78
RETREG3-210ENST00000590541 SUSD6Q92537 303 aa19.95■□□□□ 0.78
RETREG3-210ENST00000590541 SENP2Q9HC62 589 aa19.95■□□□□ 0.78
RETREG3-210ENST00000590541 ERAP1Q9NZ08 941 aa19.95■□□□□ 0.78
RETREG3-210ENST00000590541 PLXNA4Q9HCM2 1894 aa19.94■□□□□ 0.78
RETREG3-210ENST00000590541 KCNA2P16389 499 aa19.94■□□□□ 0.78
RETREG3-210ENST00000590541 PDE4AP27815 886 aa19.94■□□□□ 0.78
RETREG3-210ENST00000590541 GATMP50440 423 aa19.94■□□□□ 0.78
RETREG3-210ENST00000590541 IRX6P78412 446 aaPredicted RBP19.94■□□□□ 0.78
RETREG3-210ENST00000590541 XRRA1Q6P2D8 792 aa19.94■□□□□ 0.78
RETREG3-210ENST00000590541 USP17L6PQ6QN14 398 aa19.94■□□□□ 0.78
RETREG3-210ENST00000590541 NLRX1Q86UT6 975 aa19.94■□□□□ 0.78
RETREG3-210ENST00000590541 GIMAP8Q8ND71 665 aaPredicted RBP19.94■□□□□ 0.78
RETREG3-210ENST00000590541 VN1R2Q8NFZ6 395 aa19.94■□□□□ 0.78
RETREG3-210ENST00000590541 ATP8B4Q8TF62 1192 aa19.94■□□□□ 0.78
RETREG3-210ENST00000590541 SEPT1Q8WYJ6 367 aa19.94■□□□□ 0.78
RETREG3-210ENST00000590541 FTHL17Q9BXU8 183 aa19.94■□□□□ 0.78
RETREG3-210ENST00000590541 SQORQ9Y6N5 450 aa19.94■□□□□ 0.78
RETREG3-210ENST00000590541 ZDBF2Q9HCK1 2354 aa19.94■□□□□ 0.78
RETREG3-210ENST00000590541 CFAP54Q96N23 3096 aa19.94■□□□□ 0.78
RETREG3-210ENST00000590541 MEIS2O14770 477 aa19.93■□□□□ 0.78
RETREG3-210ENST00000590541 PER2O15055 1255 aa19.93■□□□□ 0.78
RETREG3-210ENST00000590541 STAG3L1P0CL83 205 aa19.93■□□□□ 0.78
RETREG3-210ENST00000590541 ATF7P17544 494 aaPredicted RBP19.93■□□□□ 0.78
RETREG3-210ENST00000590541 TROAPQ12815 778 aa19.93■□□□□ 0.78
RETREG3-210ENST00000590541 FAM49AQ9H0Q0 323 aaPredicted RBP19.93■□□□□ 0.78
RETREG3-210ENST00000590541 IL25Q9H293 177 aa19.93■□□□□ 0.78
RETREG3-210ENST00000590541 TLE6Q9H808 572 aa19.93■□□□□ 0.78
RETREG3-210ENST00000590541 PADI3Q9ULW8 664 aa19.93■□□□□ 0.78
RETREG3-210ENST00000590541 PPFIA3O75145 1194 aa19.92■□□□□ 0.78
RETREG3-210ENST00000590541 SCG2P13521 617 aa19.92■□□□□ 0.78
RETREG3-210ENST00000590541 IGBP1P78318 339 aa19.92■□□□□ 0.78
RETREG3-210ENST00000590541 IER5Q5VY09 327 aa19.92■□□□□ 0.78
RETREG3-210ENST00000590541 SMARCC2Q8TAQ2 1214 aa19.92■□□□□ 0.78
RETREG3-210ENST00000590541 PIBF1Q8WXW3 757 aa19.92■□□□□ 0.78
RETREG3-210ENST00000590541 ATOH1Q92858 354 aaPredicted RBP19.92■□□□□ 0.78
RETREG3-210ENST00000590541 GPRASP2Q96D09 838 aa19.92■□□□□ 0.78
RETREG3-210ENST00000590541 TRPV2Q9Y5S1 764 aa19.92■□□□□ 0.78
RETREG3-210ENST00000590541 PIK3CDO00329 1044 aa19.91■□□□□ 0.78
RETREG3-210ENST00000590541 INSRRP14616 1297 aa19.91■□□□□ 0.78
RETREG3-210ENST00000590541 GSPT1P15170 499 aaKnown RBP19.91■□□□□ 0.78
RETREG3-210ENST00000590541 TMEM62Q0P6H9 643 aa19.91■□□□□ 0.78
RETREG3-210ENST00000590541 PTPN21Q16825 1174 aa19.91■□□□□ 0.78
RETREG3-210ENST00000590541 MICAL1Q8TDZ2 1067 aa19.91■□□□□ 0.78
RETREG3-210ENST00000590541 GLG1Q92896 1179 aa19.91■□□□□ 0.78
RETREG3-210ENST00000590541 IRF2BPLQ9H1B7 796 aa19.91■□□□□ 0.78
RETREG3-210ENST00000590541 TMX1Q9H3N1 280 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms