RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 PCDHA6Q9UN73 950 aa17.86■□□□□ 0.45
USB1-208ENST00000563207 PCDHA8Q9Y5H6 950 aa17.86■□□□□ 0.45
USB1-208ENST00000563207 SIP14410 1827 aa17.86■□□□□ 0.45
USB1-208ENST00000563207 GSTTP1A0A1W2PQM5 241 aa17.85■□□□□ 0.45
USB1-208ENST00000563207 RSPH10B2B2RC85 870 aa17.85■□□□□ 0.45
USB1-208ENST00000563207 LPXNO60711 386 aa17.85■□□□□ 0.45
USB1-208ENST00000563207 LGR5O75473 907 aa17.85■□□□□ 0.45
USB1-208ENST00000563207 CD2BP2O95400 341 aaKnown RBP17.85■□□□□ 0.45
USB1-208ENST00000563207 RSPH10BP0C881 870 aa17.85■□□□□ 0.45
USB1-208ENST00000563207 MKRN4PQ13434 485 aaPredicted RBP17.85■□□□□ 0.45
USB1-208ENST00000563207 PRRC2BQ5JSZ5 2229 aaKnown RBP17.85■□□□□ 0.45
USB1-208ENST00000563207 TJAP1Q5JTD0 557 aa17.85■□□□□ 0.45
USB1-208ENST00000563207 GALNT17Q6IS24 598 aa17.85■□□□□ 0.45
USB1-208ENST00000563207 MICAL3Q7RTP6 2002 aa17.85■□□□□ 0.45
USB1-208ENST00000563207 BICD2Q8TD16 824 aa17.85■□□□□ 0.45
USB1-208ENST00000563207 ZMYND12Q9H0C1 365 aa17.85■□□□□ 0.45
USB1-208ENST00000563207 C6orf50Q9HD87 102 aa17.85■□□□□ 0.45
USB1-208ENST00000563207 RIC8AQ9NPQ8 531 aa17.85■□□□□ 0.45
USB1-208ENST00000563207 MTUS1Q9ULD2 1270 aa17.85■□□□□ 0.45
USB1-208ENST00000563207 UBIAD1Q9Y5Z9 338 aa17.85■□□□□ 0.45
USB1-208ENST00000563207 TCF20Q9UGU0 1960 aaKnown RBP17.84■□□□□ 0.45
USB1-208ENST00000563207 SMCO2A6NFE2 343 aa17.84■□□□□ 0.45
USB1-208ENST00000563207 MARK3P27448 753 aa17.84■□□□□ 0.45
USB1-208ENST00000563207 TCF7P36402 384 aaPredicted RBP17.84■□□□□ 0.45
USB1-208ENST00000563207 ADCY7P51828 1080 aa17.84■□□□□ 0.45
USB1-208ENST00000563207 ADAM17P78536 824 aa17.84■□□□□ 0.45
USB1-208ENST00000563207 RUFY4Q6ZNE9 571 aa17.84■□□□□ 0.45
USB1-208ENST00000563207 LMBR1Q8WVP7 490 aa17.84■□□□□ 0.45
USB1-208ENST00000563207 ZBED2Q9BTP6 218 aa17.84■□□□□ 0.45
USB1-208ENST00000563207 TMEM260Q9NX78 707 aa17.84■□□□□ 0.45
USB1-208ENST00000563207 THEGQ9P2T0 379 aa17.84■□□□□ 0.45
USB1-208ENST00000563207 ABHD14A-ACY1A0A1B0GW23 586 aa17.83■□□□□ 0.44
USB1-208ENST00000563207 KIF28PB7ZC32 967 aa17.83■□□□□ 0.44
USB1-208ENST00000563207 GJB5O95377 273 aa17.83■□□□□ 0.44
USB1-208ENST00000563207 FOSP01100 380 aaPredicted RBP17.83■□□□□ 0.44
USB1-208ENST00000563207 ARHGAP4P98171 946 aa17.83■□□□□ 0.44
USB1-208ENST00000563207 ST3GAL1Q11201 340 aa17.83■□□□□ 0.44
USB1-208ENST00000563207 GRB10Q13322 594 aa17.83■□□□□ 0.44
USB1-208ENST00000563207 IKBKEQ14164 716 aa17.83■□□□□ 0.44
USB1-208ENST00000563207 NLRX1Q86UT6 975 aa17.83■□□□□ 0.44
USB1-208ENST00000563207 ASB2Q96Q27 587 aa17.83■□□□□ 0.44
USB1-208ENST00000563207 UIMC1Q96RL1 719 aa17.83■□□□□ 0.44
USB1-208ENST00000563207 SENP7Q9BQF6 1050 aa17.83■□□□□ 0.44
USB1-208ENST00000563207 KIF3AQ9Y496 699 aa17.83■□□□□ 0.44
USB1-208ENST00000563207 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.83■□□□□ 0.44
USB1-208ENST00000563207 PPFIA3O75145 1194 aa17.82■□□□□ 0.44
USB1-208ENST00000563207 FDPSP14324 419 aaKnown RBP17.82■□□□□ 0.44
USB1-208ENST00000563207 PLEKHG4Q58EX7 1191 aa17.82■□□□□ 0.44
USB1-208ENST00000563207 XRRA1Q6P2D8 792 aa17.82■□□□□ 0.44
USB1-208ENST00000563207 GDPD5Q8WTR4 605 aa17.82■□□□□ 0.44
USB1-208ENST00000563207 GPRASP2Q96D09 838 aa17.82■□□□□ 0.44
USB1-208ENST00000563207 NECAB3Q96P71 396 aaPredicted RBP17.82■□□□□ 0.44
USB1-208ENST00000563207 PCYT2Q99447 389 aa17.82■□□□□ 0.44
USB1-208ENST00000563207 EHMT1Q9H9B1 1298 aa17.82■□□□□ 0.44
USB1-208ENST00000563207 KAT6AQ92794 2004 aa17.81■□□□□ 0.44
USB1-208ENST00000563207 LINC01553A4QN01 128 aa17.81■□□□□ 0.44
USB1-208ENST00000563207 SPDYE3A6NKU9 549 aa17.81■□□□□ 0.44
USB1-208ENST00000563207 K7ELQ4 463 aaPredicted RBP17.81■□□□□ 0.44
USB1-208ENST00000563207 PARNO95453 639 aaKnown RBP17.81■□□□□ 0.44
USB1-208ENST00000563207 ARP10275 920 aa17.81■□□□□ 0.44
USB1-208ENST00000563207 NLRP5P59047 1200 aa17.81■□□□□ 0.44
USB1-208ENST00000563207 AP3B2Q13367 1082 aa17.81■□□□□ 0.44
USB1-208ENST00000563207 MTMR1Q13613 665 aa17.81■□□□□ 0.44
USB1-208ENST00000563207 CUL4AQ13619 759 aa17.81■□□□□ 0.44
USB1-208ENST00000563207 ATXN2LQ8WWM7 1075 aaKnown RBP17.81■□□□□ 0.44
USB1-208ENST00000563207 SUGCTQ9HAC7 445 aa17.81■□□□□ 0.44
USB1-208ENST00000563207 JADE2Q9NQC1 790 aa17.81■□□□□ 0.44
USB1-208ENST00000563207 VPS54Q9P1Q0 977 aa17.81■□□□□ 0.44
USB1-208ENST00000563207 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.8■□□□□ 0.44
USB1-208ENST00000563207 JAK2O60674 1132 aa17.8■□□□□ 0.44
USB1-208ENST00000563207 CHRNA1P02708 482 aa17.8■□□□□ 0.44
USB1-208ENST00000563207 POU3F3P20264 500 aaPredicted RBP17.8■□□□□ 0.44
USB1-208ENST00000563207 CLK2P49760 499 aaKnown RBP17.8■□□□□ 0.44
USB1-208ENST00000563207 KCNQ1P51787 676 aa17.8■□□□□ 0.44
USB1-208ENST00000563207 SKIV2LQ15477 1246 aaKnown RBP17.8■□□□□ 0.44
USB1-208ENST00000563207 MARCH8Q5T0T0 291 aa17.8■□□□□ 0.44
USB1-208ENST00000563207 HSCBQ8IWL3 235 aa17.8■□□□□ 0.44
USB1-208ENST00000563207 MYOCDQ8IZQ8 938 aa17.8■□□□□ 0.44
USB1-208ENST00000563207 FAM184AQ8NB25 1140 aa17.8■□□□□ 0.44
USB1-208ENST00000563207 SEPT1Q8WYJ6 367 aa17.8■□□□□ 0.44
USB1-208ENST00000563207 RAD9AQ99638 391 aa17.8■□□□□ 0.44
USB1-208ENST00000563207 C17orf80Q9BSJ5 609 aa17.8■□□□□ 0.44
USB1-208ENST00000563207 KCNH7Q9NS40 1196 aa17.8■□□□□ 0.44
USB1-208ENST00000563207 UPP2O95045 317 aa17.79■□□□□ 0.44
USB1-208ENST00000563207 MRPS5P82675 430 aaKnown RBP17.79■□□□□ 0.44
USB1-208ENST00000563207 ITGB3BPQ13352 177 aaPredicted RBP17.79■□□□□ 0.44
USB1-208ENST00000563207 TRIM29Q14134 588 aa17.79■□□□□ 0.44
USB1-208ENST00000563207 REXO1Q8N1G1 1221 aaKnown RBP17.79■□□□□ 0.44
USB1-208ENST00000563207 DAGLBQ8NCG7 672 aa17.79■□□□□ 0.44
USB1-208ENST00000563207 SYMPKQ92797 1274 aaKnown RBP17.79■□□□□ 0.44
USB1-208ENST00000563207 INTS4Q96HW7 963 aaKnown RBP17.79■□□□□ 0.44
USB1-208ENST00000563207 MXRA8Q9BRK3 442 aa17.79■□□□□ 0.44
USB1-208ENST00000563207 PHF20Q9BVI0 1012 aa17.79■□□□□ 0.44
USB1-208ENST00000563207 ZNF215Q9UL58 517 aaPredicted RBP17.79■□□□□ 0.44
USB1-208ENST00000563207 PCDHA4Q9UN74 947 aa17.79■□□□□ 0.44
USB1-208ENST00000563207 EMSYQ7Z589 1322 aa17.78■□□□□ 0.44
USB1-208ENST00000563207 IGBP1P78318 339 aa17.78■□□□□ 0.44
USB1-208ENST00000563207 GIMAP8Q8ND71 665 aaPredicted RBP17.78■□□□□ 0.44
USB1-208ENST00000563207 ADAMTS19Q8TE59 1207 aa17.78■□□□□ 0.44
USB1-208ENST00000563207 TRAPPC12Q8WVT3 735 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms