RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 POLR2FP61218 127 aaKnown RBP11.66□□□□□ -0.54
TPM1-210ENST00000558264 PLS1Q14651 629 aa11.66□□□□□ -0.54
TPM1-210ENST00000558264 DCAF17Q5H9S7 520 aaPredicted RBP11.66□□□□□ -0.54
TPM1-210ENST00000558264 MCTP2Q6DN12 878 aa11.66□□□□□ -0.54
TPM1-210ENST00000558264 RINT1Q6NUQ1 792 aa11.66□□□□□ -0.54
TPM1-210ENST00000558264 FAM160B2Q86V87 743 aa11.66□□□□□ -0.54
TPM1-210ENST00000558264 ANKRD13CQ8N6S4 541 aa11.66□□□□□ -0.54
TPM1-210ENST00000558264 MTMR14Q8NCE2 650 aa11.66□□□□□ -0.54
TPM1-210ENST00000558264 WNK4Q96J92 1243 aa11.66□□□□□ -0.54
TPM1-210ENST00000558264 WDR11Q9BZH6 1224 aa11.66□□□□□ -0.54
TPM1-210ENST00000558264 SH2D4AQ9H788 454 aa11.66□□□□□ -0.54
TPM1-210ENST00000558264 HACL1Q9UJ83 578 aa11.66□□□□□ -0.54
TPM1-210ENST00000558264 CDC23Q9UJX2 597 aa11.66□□□□□ -0.54
TPM1-210ENST00000558264 TULP1O00294 542 aaPredicted RBP11.65□□□□□ -0.54
TPM1-210ENST00000558264 FLOT1O75955 427 aa11.65□□□□□ -0.54
TPM1-210ENST00000558264 ACTN1P12814 892 aa11.65□□□□□ -0.54
TPM1-210ENST00000558264 ITGB5P18084 799 aa11.65□□□□□ -0.54
TPM1-210ENST00000558264 CASP4P49662 377 aa11.65□□□□□ -0.54
TPM1-210ENST00000558264 TDRD12Q587J7 1177 aaKnown RBP11.65□□□□□ -0.54
TPM1-210ENST00000558264 FKBP1CQ5VVH2 108 aa11.65□□□□□ -0.54
TPM1-210ENST00000558264 BAP1Q92560 729 aa11.65□□□□□ -0.54
TPM1-210ENST00000558264 CAPZA3Q96KX2 299 aa11.65□□□□□ -0.54
TPM1-210ENST00000558264 HSD17B14Q9BPX1 270 aa11.65□□□□□ -0.54
TPM1-210ENST00000558264 SYNPO2Q9UMS6 1093 aa11.65□□□□□ -0.54
TPM1-210ENST00000558264 PITPNM2Q9BZ72 1349 aa11.65□□□□□ -0.54
TPM1-210ENST00000558264 IPO5O00410 1097 aaKnown RBP11.65□□□□□ -0.54
TPM1-210ENST00000558264 EYA4O95677 639 aa11.65□□□□□ -0.54
TPM1-210ENST00000558264 EIF2AK2P19525 551 aaKnown RBP11.65□□□□□ -0.54
TPM1-210ENST00000558264 EPS15P42566 896 aa11.65□□□□□ -0.54
TPM1-210ENST00000558264 PTGER2P43116 358 aa11.65□□□□□ -0.54
TPM1-210ENST00000558264 KIF11P52732 1056 aa11.65□□□□□ -0.54
TPM1-210ENST00000558264 GFPT1Q06210 699 aaPredicted RBP11.65□□□□□ -0.54
TPM1-210ENST00000558264 TCERG1LQ5VWI1 586 aa11.65□□□□□ -0.54
TPM1-210ENST00000558264 TRIM59Q8IWR1 403 aa11.65□□□□□ -0.54
TPM1-210ENST00000558264 MYCT1Q8N699 235 aa11.65□□□□□ -0.54
TPM1-210ENST00000558264 ZKSCAN4Q969J2 545 aaPredicted RBP11.65□□□□□ -0.54
TPM1-210ENST00000558264 MLXIPQ9HAP2 919 aa11.65□□□□□ -0.54
TPM1-210ENST00000558264 ST7Q9NRC1 585 aa11.65□□□□□ -0.54
TPM1-210ENST00000558264 DDX41Q9UJV9 622 aaKnown RBP11.65□□□□□ -0.54
TPM1-210ENST00000558264 PLAGL2Q9UPG8 496 aa11.65□□□□□ -0.54
TPM1-210ENST00000558264 A0A1W2PQJ5 194 aa11.64□□□□□ -0.55
TPM1-210ENST00000558264 TMEM150BA6NC51 233 aa11.64□□□□□ -0.55
TPM1-210ENST00000558264 AKR1B10O60218 316 aa11.64□□□□□ -0.55
TPM1-210ENST00000558264 NOL4O94818 638 aa11.64□□□□□ -0.55
TPM1-210ENST00000558264 FAM13AO94988 1023 aa11.64□□□□□ -0.55
TPM1-210ENST00000558264 RHOXF2BP0C7M4 288 aa11.64□□□□□ -0.55
TPM1-210ENST00000558264 KRT83P78385 493 aa11.64□□□□□ -0.55
TPM1-210ENST00000558264 COG2Q14746 738 aa11.64□□□□□ -0.55
TPM1-210ENST00000558264 KNOP1Q1ED39 458 aaKnown RBP11.64□□□□□ -0.55
TPM1-210ENST00000558264 RSRC2Q7L4I2 434 aaKnown RBP11.64□□□□□ -0.55
TPM1-210ENST00000558264 SRGAP1Q7Z6B7 1085 aa11.64□□□□□ -0.55
TPM1-210ENST00000558264 SLC16A10Q8TF71 515 aa11.64□□□□□ -0.55
TPM1-210ENST00000558264 GOLGA1Q92805 767 aa11.64□□□□□ -0.55
TPM1-210ENST00000558264 SLC5A5Q92911 643 aa11.64□□□□□ -0.55
TPM1-210ENST00000558264 RHOXF2Q9BQY4 288 aa11.64□□□□□ -0.55
TPM1-210ENST00000558264 POLR3CQ9BUI4 534 aaPredicted RBP11.64□□□□□ -0.55
TPM1-210ENST00000558264 DEFB129Q9H1M3 183 aa11.64□□□□□ -0.55
TPM1-210ENST00000558264 HAUS4Q9H6D7 363 aa11.64□□□□□ -0.55
TPM1-210ENST00000558264 EIF3CLB5ME19 914 aaKnown RBP11.64□□□□□ -0.55
TPM1-210ENST00000558264 CETN3O15182 167 aa11.64□□□□□ -0.55
TPM1-210ENST00000558264 AKAP3O75969 853 aa11.64□□□□□ -0.55
TPM1-210ENST00000558264 ICAM1P05362 532 aa11.64□□□□□ -0.55
TPM1-210ENST00000558264 KCNH2Q12809 1159 aa11.64□□□□□ -0.55
TPM1-210ENST00000558264 SPP2Q13103 211 aa11.64□□□□□ -0.55
TPM1-210ENST00000558264 PRKG1Q13976 671 aa11.64□□□□□ -0.55
TPM1-210ENST00000558264 R3HDM1Q15032 1099 aaKnown RBP11.64□□□□□ -0.55
TPM1-210ENST00000558264 SPA17Q15506 151 aa11.64□□□□□ -0.55
TPM1-210ENST00000558264 FIGNQ5HY92 759 aa11.64□□□□□ -0.55
TPM1-210ENST00000558264 CLEC4DQ8WXI8 215 aa11.64□□□□□ -0.55
TPM1-210ENST00000558264 EIF3CQ99613 913 aaKnown RBP11.64□□□□□ -0.55
TPM1-210ENST00000558264 LXNQ9BS40 222 aa11.64□□□□□ -0.55
TPM1-210ENST00000558264 PARD6BQ9BYG5 372 aa11.64□□□□□ -0.55
TPM1-210ENST00000558264 IFIH1Q9BYX4 1025 aaKnown RBP11.64□□□□□ -0.55
TPM1-210ENST00000558264 CNOT7Q9UIV1 285 aaKnown RBP11.64□□□□□ -0.55
TPM1-210ENST00000558264 PCDHB13Q9Y5F0 798 aa11.64□□□□□ -0.55
TPM1-210ENST00000558264 ASTN1O14525 1302 aa11.64□□□□□ -0.55
TPM1-210ENST00000558264 ZNF185O15231 689 aa11.63□□□□□ -0.55
TPM1-210ENST00000558264 MYCLP12524 364 aaPredicted RBP11.63□□□□□ -0.55
TPM1-210ENST00000558264 VCAM1P19320 739 aa11.63□□□□□ -0.55
TPM1-210ENST00000558264 TGFB2P61812 414 aa11.63□□□□□ -0.55
TPM1-210ENST00000558264 RAPGEF1Q13905 1077 aa11.63□□□□□ -0.55
TPM1-210ENST00000558264 TNIP1Q15025 636 aa11.63□□□□□ -0.55
TPM1-210ENST00000558264 PDXDC1Q6P996 788 aa11.63□□□□□ -0.55
TPM1-210ENST00000558264 DNAAF5Q86Y56 855 aa11.63□□□□□ -0.55
TPM1-210ENST00000558264 PRPF38AQ8NAV1 312 aaKnown RBP11.63□□□□□ -0.55
TPM1-210ENST00000558264 CEP63Q96MT8 703 aa11.63□□□□□ -0.55
TPM1-210ENST00000558264 PSMB7Q99436 277 aa11.63□□□□□ -0.55
TPM1-210ENST00000558264 MYO6Q9UM54 1294 aa11.63□□□□□ -0.55
TPM1-210ENST00000558264 SAMM50Q9Y512 469 aa11.63□□□□□ -0.55
TPM1-210ENST00000558264 KRT86O43790 486 aa11.63□□□□□ -0.55
TPM1-210ENST00000558264 TLR2O60603 784 aa11.63□□□□□ -0.55
TPM1-210ENST00000558264 SLC9A1P19634 815 aa11.63□□□□□ -0.55
TPM1-210ENST00000558264 PPP2R5CQ13362 524 aa11.63□□□□□ -0.55
TPM1-210ENST00000558264 DLK2Q6UY11 383 aa11.63□□□□□ -0.55
TPM1-210ENST00000558264 NSMFQ6X4W1 530 aa11.63□□□□□ -0.55
TPM1-210ENST00000558264 EPM2AIP1Q7L775 607 aaPredicted RBP11.63□□□□□ -0.55
TPM1-210ENST00000558264 CCDC170Q8IYT3 715 aa11.63□□□□□ -0.55
TPM1-210ENST00000558264 NOA1Q8NC60 698 aaKnown RBP11.63□□□□□ -0.55
TPM1-210ENST00000558264 RPAP3Q9H6T3 665 aaPredicted RBP11.63□□□□□ -0.55
TPM1-210ENST00000558264 KCNH7Q9NS40 1196 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms