RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 ZNF286BP0CG31 522 aa24.12■■□□□ 1.45
NEK3-202ENST00000550841 PSEN2P49810 448 aa24.12■■□□□ 1.45
NEK3-202ENST00000550841 FXR2P51116 673 aaKnown RBP eCLIP24.12■■□□□ 1.45
NEK3-202ENST00000550841 ITGA7Q13683 1181 aa24.12■■□□□ 1.45
NEK3-202ENST00000550841 MFSD10Q14728 455 aa24.12■■□□□ 1.45
NEK3-202ENST00000550841 NCAPH2Q6IBW4 605 aa24.12■■□□□ 1.45
NEK3-202ENST00000550841 SLC39A5Q6ZMH5 540 aa24.12■■□□□ 1.45
NEK3-202ENST00000550841 AFAP1L1Q8TED9 768 aa24.12■■□□□ 1.45
NEK3-202ENST00000550841 KAT2BQ92831 832 aa24.12■■□□□ 1.45
NEK3-202ENST00000550841 C1orf53Q5VUE5 145 aa24.11■■□□□ 1.45
NEK3-202ENST00000550841 ERMNQ8TAM6 284 aa24.11■■□□□ 1.45
NEK3-202ENST00000550841 ATP6V0A1Q93050 837 aa24.11■■□□□ 1.45
NEK3-202ENST00000550841 USP28Q96RU2 1077 aa24.11■■□□□ 1.45
NEK3-202ENST00000550841 GABBR1Q9UBS5 961 aa24.11■■□□□ 1.45
NEK3-202ENST00000550841 NR2E3Q9Y5X4 410 aa24.11■■□□□ 1.45
NEK3-202ENST00000550841 MORC2Q9Y6X9 1032 aaPredicted RBP24.11■■□□□ 1.45
NEK3-202ENST00000550841 ARVCFO00192 962 aa24.1■■□□□ 1.45
NEK3-202ENST00000550841 HAS3O00219 553 aa24.1■■□□□ 1.45
NEK3-202ENST00000550841 P4HBP07237 508 aaKnown RBP24.1■■□□□ 1.45
NEK3-202ENST00000550841 NASPP49321 788 aaPredicted RBP24.1■■□□□ 1.45
NEK3-202ENST00000550841 CEBPZQ03701 1054 aaKnown RBP24.1■■□□□ 1.45
NEK3-202ENST00000550841 PTPN11Q06124 597 aaPredicted RBP24.1■■□□□ 1.45
NEK3-202ENST00000550841 SPIRE1Q08AE8 756 aa24.1■■□□□ 1.45
NEK3-202ENST00000550841 SLC39A14Q15043 492 aa24.1■■□□□ 1.45
NEK3-202ENST00000550841 KIAA0753Q2KHM9 967 aa24.1■■□□□ 1.45
NEK3-202ENST00000550841 NBPF20Q3BBV1 942 aa24.1■■□□□ 1.45
NEK3-202ENST00000550841 PDXDC2PQ6P474 469 aa24.1■■□□□ 1.45
NEK3-202ENST00000550841 NFRKBQ6P4R8 1299 aa24.1■■□□□ 1.45
NEK3-202ENST00000550841 CHRDL2Q6WN34 429 aa24.1■■□□□ 1.45
NEK3-202ENST00000550841 NEK9Q8TD19 979 aa24.1■■□□□ 1.45
NEK3-202ENST00000550841 PCYT2Q99447 389 aa24.1■■□□□ 1.45
NEK3-202ENST00000550841 CHMP5Q9NZZ3 219 aa24.1■■□□□ 1.45
NEK3-202ENST00000550841 TFIP11Q9UBB9 837 aaKnown RBP24.1■■□□□ 1.45
NEK3-202ENST00000550841 MAFBQ9Y5Q3 323 aaPredicted RBP24.1■■□□□ 1.45
NEK3-202ENST00000550841 EML1O00423 815 aa24.09■■□□□ 1.45
NEK3-202ENST00000550841 CHMP4BP1P59074 171 aa24.09■■□□□ 1.45
NEK3-202ENST00000550841 PSMC6P62333 389 aa24.09■■□□□ 1.45
NEK3-202ENST00000550841 STK38Q15208 465 aa24.09■■□□□ 1.45
NEK3-202ENST00000550841 PTPAQ15257 358 aa24.09■■□□□ 1.45
NEK3-202ENST00000550841 CCDC60Q8IWA6 550 aaPredicted RBP24.09■■□□□ 1.45
NEK3-202ENST00000550841 C7orf31Q8N865 590 aa24.09■■□□□ 1.45
NEK3-202ENST00000550841 LRWD1Q9UFC0 647 aa24.09■■□□□ 1.45
NEK3-202ENST00000550841 MROH7Q68CQ1 1323 aa24.09■■□□□ 1.45
NEK3-202ENST00000550841 YEATS4O95619 227 aa24.08■■□□□ 1.45
NEK3-202ENST00000550841 QARSP47897 775 aaKnown RBP24.08■■□□□ 1.45
NEK3-202ENST00000550841 PSMC5P62195 406 aa24.08■■□□□ 1.45
NEK3-202ENST00000550841 FOXD4L6Q3SYB3 417 aaPredicted RBP24.08■■□□□ 1.45
NEK3-202ENST00000550841 FOXD4L3Q6VB84 417 aaPredicted RBP24.08■■□□□ 1.45
NEK3-202ENST00000550841 TRIM50Q86XT4 487 aa24.08■■□□□ 1.45
NEK3-202ENST00000550841 CKAP2LQ8IYA6 745 aa24.08■■□□□ 1.45
NEK3-202ENST00000550841 SLC43A3Q8NBI5 491 aa24.08■■□□□ 1.45
NEK3-202ENST00000550841 FAM167AQ96KS9 214 aa24.08■■□□□ 1.45
NEK3-202ENST00000550841 NRBP2Q9NSY0 501 aa24.08■■□□□ 1.45
NEK3-202ENST00000550841 SCN10AQ9Y5Y9 1956 aa24.07■■□□□ 1.44
NEK3-202ENST00000550841 CDK7P50613 346 aa24.07■■□□□ 1.44
NEK3-202ENST00000550841 ATN1P54259 1190 aaPredicted RBP24.07■■□□□ 1.44
NEK3-202ENST00000550841 KRT85P78386 507 aa24.07■■□□□ 1.44
NEK3-202ENST00000550841 DNM1Q05193 864 aaKnown RBP24.07■■□□□ 1.44
NEK3-202ENST00000550841 SESTD1Q86VW0 696 aa24.07■■□□□ 1.44
NEK3-202ENST00000550841 IGSF22Q8N9C0 903 aa24.07■■□□□ 1.44
NEK3-202ENST00000550841 LINC00301Q8NCQ3 95 aa24.07■■□□□ 1.44
NEK3-202ENST00000550841 AK8Q96MA6 479 aa24.07■■□□□ 1.44
NEK3-202ENST00000550841 EIF2AK1Q9BQI3 630 aaKnown RBP24.07■■□□□ 1.44
NEK3-202ENST00000550841 FTOQ9C0B1 505 aaKnown RBP eCLIP24.07■■□□□ 1.44
NEK3-202ENST00000550841 MYH9P35579 1960 aaKnown RBP24.07■■□□□ 1.44
NEK3-202ENST00000550841 POTEB3A0JP26 581 aa24.06■■□□□ 1.44
NEK3-202ENST00000550841 VWA3AA6NCI4 1184 aa24.06■■□□□ 1.44
NEK3-202ENST00000550841 POTEMA6NI47 508 aa24.06■■□□□ 1.44
NEK3-202ENST00000550841 HBP1O60381 514 aa24.06■■□□□ 1.44
NEK3-202ENST00000550841 GNAT1P11488 350 aa24.06■■□□□ 1.44
NEK3-202ENST00000550841 LONP1P36776 959 aaKnown RBP24.06■■□□□ 1.44
NEK3-202ENST00000550841 SNX17Q15036 470 aa24.06■■□□□ 1.44
NEK3-202ENST00000550841 FAM47CQ5HY64 1035 aa24.06■■□□□ 1.44
NEK3-202ENST00000550841 HAUS3Q68CZ6 603 aa24.06■■□□□ 1.44
NEK3-202ENST00000550841 POTEBQ6S5H4 581 aa24.06■■□□□ 1.44
NEK3-202ENST00000550841 HSD17B14Q9BPX1 270 aa24.06■■□□□ 1.44
NEK3-202ENST00000550841 RNPEPQ9H4A4 650 aa24.06■■□□□ 1.44
NEK3-202ENST00000550841 ZSWIM4Q9H7M6 989 aa24.06■■□□□ 1.44
NEK3-202ENST00000550841 SRPRBQ9Y5M8 271 aaKnown RBP24.06■■□□□ 1.44
NEK3-202ENST00000550841 GRIN2DO15399 1336 aa24.06■■□□□ 1.44
NEK3-202ENST00000550841 IGSF9BQ9UPX0 1349 aa24.06■■□□□ 1.44
NEK3-202ENST00000550841 RRN3P2A6NIE6 340 aa24.05■■□□□ 1.44
NEK3-202ENST00000550841 SPTLC2O15270 562 aa24.05■■□□□ 1.44
NEK3-202ENST00000550841 TLR3O15455 904 aaKnown RBP24.05■■□□□ 1.44
NEK3-202ENST00000550841 PPP6R2O75170 966 aa24.05■■□□□ 1.44
NEK3-202ENST00000550841 MUTP22033 750 aa24.05■■□□□ 1.44
NEK3-202ENST00000550841 MARK3P27448 753 aa24.05■■□□□ 1.44
NEK3-202ENST00000550841 PLCB4Q15147 1175 aa24.05■■□□□ 1.44
NEK3-202ENST00000550841 IL17AQ16552 155 aa24.05■■□□□ 1.44
NEK3-202ENST00000550841 KRT79Q5XKE5 535 aa24.05■■□□□ 1.44
NEK3-202ENST00000550841 KCNG4Q8TDN1 519 aa24.05■■□□□ 1.44
NEK3-202ENST00000550841 ATP8B4Q8TF62 1192 aa24.05■■□□□ 1.44
NEK3-202ENST00000550841 BBXQ8WY36 941 aaPredicted RBP24.05■■□□□ 1.44
NEK3-202ENST00000550841 DYDC2Q96IM9 177 aa24.05■■□□□ 1.44
NEK3-202ENST00000550841 TOX2Q96NM4 488 aa24.05■■□□□ 1.44
NEK3-202ENST00000550841 POLR3CQ9BUI4 534 aaPredicted RBP24.05■■□□□ 1.44
NEK3-202ENST00000550841 TUFT1Q9NNX1 390 aa24.05■■□□□ 1.44
NEK3-202ENST00000550841 TRPC6Q9Y210 931 aa24.05■■□□□ 1.44
NEK3-202ENST00000550841 MYH15Q9Y2K3 1946 aa24.05■■□□□ 1.44
NEK3-202ENST00000550841 DCDC2CA8MYV0 355 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms